prot_H-paniculata_contig21777.5756.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig21777.5756.1
Unique Name	prot_H-paniculata_contig21777.5756.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	170

Homology

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BLAST of mRNA_H-paniculata_contig21777.5756.1 vs. uniprot
Match: A0A6H5L308_9PHAE (Tr-type G domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L308_9PHAE)

HSP 1 Score: 308 bits (788), Expect = 2.110e-96
Identity = 150/165 (90.91%), Postives = 154/165 (93.33%), Query Frame = 0

Query:    1 VKVADPSTAFCETVVETSSLKCFSETPNKRNKITMIAEPLENGLAVDIESGEVSIEWDRKTLGEFFQAKYDWDLLAARSIWAFGPEIDGPNILVDDTLPSEARFWIMDTSVDKNRLNACRESIVQGFQWGCREGPLCDEPIRNAKFKIIDATIAAEPIHRGGGQV 165
            VKVADPSTAFCETVVETSSLKCFSETPNKRNK+TMIAEPLENGLAVDIESGEVSIEWDRKTLGEFFQ+KYDWDLLAARSIWAFGPE DGPNILVDDTLPSE         VDKNRLNACR+SIVQGFQWGCREGPLCDEPIRNAKFKI+DA IAAEPIHRGGGQV
Sbjct:  650 VKVADPSTAFCETVVETSSLKCFSETPNKRNKLTMIAEPLENGLAVDIESGEVSIEWDRKTLGEFFQSKYDWDLLAARSIWAFGPENDGPNILVDDTLPSE---------VDKNRLNACRDSIVQGFQWGCREGPLCDEPIRNAKFKILDAVIAAEPIHRGGGQV 805

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BLAST of mRNA_H-paniculata_contig21777.5756.1 vs. uniprot
Match: A0A7S2CQL7_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CQL7_9STRA)

HSP 1 Score: 277 bits (708), Expect = 3.540e-88
Identity = 132/165 (80.00%), Postives = 143/165 (86.67%), Query Frame = 0

Query:    1 VKVADPSTAFCETVVETSSLKCFSETPNKRNKITMIAEPLENGLAVDIESGEVSIEWDRKTLGEFFQAKYDWDLLAARSIWAFGPEIDGPNILVDDTLPSEARFWIMDTSVDKNRLNACRESIVQGFQWGCREGPLCDEPIRNAKFKIIDATIAAEPIHRGGGQV 165
            VK ADP TAFCETVVETS+LKCF+ETPNKRNK+TMIAEPLE GLA DIE GEVSI+WDRK LGEFFQ+KYDWDLLAARS+WAFGP+IDGPNILVDDTLPSE         VDK  L   +ES+VQGFQWGCREGPLCDEPIRN KFKI+DATIA EPIHRGGGQ+
Sbjct:  236 VKTADPVTAFCETVVETSALKCFAETPNKRNKLTMIAEPLEEGLAEDIERGEVSIDWDRKQLGEFFQSKYDWDLLAARSVWAFGPDIDGPNILVDDTLPSE---------VDKKLLKQVQESVVQGFQWGCREGPLCDEPIRNTKFKILDATIAPEPIHRGGGQI 391

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BLAST of mRNA_H-paniculata_contig21777.5756.1 vs. uniprot
Match: A0A7S2V928_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V928_9STRA)

HSP 1 Score: 270 bits (689), Expect = 1.240e-87
Identity = 127/165 (76.97%), Postives = 141/165 (85.45%), Query Frame = 0

Query:    1 VKVADPSTAFCETVVETSSLKCFSETPNKRNKITMIAEPLENGLAVDIESGEVSIEWDRKTLGEFFQAKYDWDLLAARSIWAFGPEIDGPNILVDDTLPSEARFWIMDTSVDKNRLNACRESIVQGFQWGCREGPLCDEPIRNAKFKIIDATIAAEPIHRGGGQV 165
            VKVADP   FCETVVETSSLKCF+ETPN+RNK+T+I EPLE GLA DIE+GEV I+WDRKTLGEFFQ+KYDWDLLAARSIWAFGP+  GPNILVDDTLPSE         VDK  L+  RE+I+QGFQWGCREGPLCDEPIRN KFKI+DA +A+EPIHRGGGQV
Sbjct:   46 VKVADPVVGFCETVVETSSLKCFAETPNRRNKLTVICEPLEQGLAADIETGEVRIDWDRKTLGEFFQSKYDWDLLAARSIWAFGPDAKGPNILVDDTLPSE---------VDKTLLSTIRETIIQGFQWGCREGPLCDEPIRNCKFKILDAVVASEPIHRGGGQV 201

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BLAST of mRNA_H-paniculata_contig21777.5756.1 vs. uniprot
Match: A0A7S2WR47_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WR47_9STRA)

HSP 1 Score: 264 bits (675), Expect = 1.310e-84
Identity = 127/165 (76.97%), Postives = 139/165 (84.24%), Query Frame = 0

Query:    1 VKVADPSTAFCETVVETSSLKCFSETPNKRNKITMIAEPLENGLAVDIESGEVSIEWDRKTLGEFFQAKYDWDLLAARSIWAFGPEIDGPNILVDDTLPSEARFWIMDTSVDKNRLNACRESIVQGFQWGCREGPLCDEPIRNAKFKIIDATIAAEPIHRGGGQV 165
            VK ADP TAFCETVVETS+LKCF+ETPNKRNK+TMIAEPLE+GLA DIE GEV + WDRK LGEFFQ KYDWDLLAARSIWAFGP+  GPNILVDDTLPSE         V+K  L   R+S+VQGFQWGCREGPLCDEPIRN KFKI++ATIA EPIHRGGGQ+
Sbjct:  117 VKTADPVTAFCETVVETSALKCFAETPNKRNKLTMIAEPLEDGLAEDIERGEVDMGWDRKQLGEFFQTKYDWDLLAARSIWAFGPDTRGPNILVDDTLPSE---------VNKKLLAQVRDSVVQGFQWGCREGPLCDEPIRNTKFKILEATIAQEPIHRGGGQI 272

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BLAST of mRNA_H-paniculata_contig21777.5756.1 vs. uniprot
Match: A0A6I9MIT2_9TELE (116 kDa U5 small nuclear ribonucleoprotein component n=1 Tax=Notothenia coriiceps TaxID=8208 RepID=A0A6I9MIT2_9TELE)

HSP 1 Score: 254 bits (650), Expect = 9.720e-83
Identity = 124/165 (75.15%), Postives = 135/165 (81.82%), Query Frame = 0

Query:    1 VKVADPSTAFCETVVETSSLKCFSETPNKRNKITMIAEPLENGLAVDIESGEVSIEWDRKTLGEFFQAKYDWDLLAARSIWAFGPEIDGPNILVDDTLPSEARFWIMDTSVDKNRLNACRESIVQGFQWGCREGPLCDEPIRNAKFKIIDATIAAEPIHRGGGQV 165
            +KVADP   FCETVVETSSLKCF+ETPNK+NKITMIAEPLE GLA DIE+  V I W+RK LGEFFQ KYDWDLLAARSIWAFGP+  GPNILVDDTLPSE         VDK  L + ++SIVQGFQWG REGPLCDEPIRN KFKI+DA IA EP+HRGGGQV
Sbjct:   33 IKVADPVVTFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQTKYDWDLLAARSIWAFGPDTTGPNILVDDTLPSE---------VDKALLGSVKDSIVQGFQWGTREGPLCDEPIRNVKFKILDAVIAQEPLHRGGGQV 188

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BLAST of mRNA_H-paniculata_contig21777.5756.1 vs. uniprot
Match: A0A1D2A5Z7_AUXPR (Uncharacterized protein (Fragment) n=1 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A1D2A5Z7_AUXPR)

HSP 1 Score: 258 bits (659), Expect = 1.280e-82
Identity = 124/165 (75.15%), Postives = 137/165 (83.03%), Query Frame = 0

Query:    1 VKVADPSTAFCETVVETSSLKCFSETPNKRNKITMIAEPLENGLAVDIESGEVSIEWDRKTLGEFFQAKYDWDLLAARSIWAFGPEIDGPNILVDDTLPSEARFWIMDTSVDKNRLNACRESIVQGFQWGCREGPLCDEPIRNAKFKIIDATIAAEPIHRGGGQV 165
            VKVADP  AFCETVVETSSLKCF+ETPNK+NKITMIAEPLE GLA DIE G VS++W RK +  FFQ+KYDWD+LAARSIWAFGP+  GPNIL+DDTLPSE         VDK  LNA RESIVQGFQWG REGPLCDEP+RN KFKI+DA +A EP+HRGGGQV
Sbjct:   83 VKVADPVVAFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIERGAVSMDWTRKEISTFFQSKYDWDILAARSIWAFGPDNSGPNILMDDTLPSE---------VDKTLLNAVRESIVQGFQWGAREGPLCDEPLRNCKFKIMDAVVAPEPLHRGGGQV 238

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BLAST of mRNA_H-paniculata_contig21777.5756.1 vs. uniprot
Match: A0A7R9DCR9_TIMPO (Hypothetical protein n=1 Tax=Timema poppense TaxID=170557 RepID=A0A7R9DCR9_TIMPO)

HSP 1 Score: 256 bits (655), Expect = 1.450e-82
Identity = 123/165 (74.55%), Postives = 138/165 (83.64%), Query Frame = 0

Query:    1 VKVADPSTAFCETVVETSSLKCFSETPNKRNKITMIAEPLENGLAVDIESGEVSIEWDRKTLGEFFQAKYDWDLLAARSIWAFGPEIDGPNILVDDTLPSEARFWIMDTSVDKNRLNACRESIVQGFQWGCREGPLCDEPIRNAKFKIIDATIAAEPIHRGGGQV 165
            +KVADP  AFCETVVETSSLKCF+ETPNK+NKITMIAEPLE GLA DIE+  V I W++K LGEFFQ KYDWDLLAARSIWAFGP++ GPNILVDDTLPSE         VDK  LN+ ++SIVQGFQWG REGPLC+EPIRN KFKI+DA IA EP+HRGGGQ+
Sbjct:   51 IKVADPVVAFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEIVQITWNKKRLGEFFQTKYDWDLLAARSIWAFGPDMTGPNILVDDTLPSE---------VDKGLLNSVKDSIVQGFQWGTREGPLCEEPIRNVKFKILDAVIAQEPLHRGGGQI 206

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BLAST of mRNA_H-paniculata_contig21777.5756.1 vs. uniprot
Match: UPI001FA412BA (Uncharacterized protein n=1 Tax=Spodoptera exigua TaxID=7107 RepID=UPI001FA412BA)

HSP 1 Score: 256 bits (655), Expect = 1.580e-82
Identity = 122/164 (74.39%), Postives = 138/164 (84.15%), Query Frame = 0

Query:    2 KVADPSTAFCETVVETSSLKCFSETPNKRNKITMIAEPLENGLAVDIESGEVSIEWDRKTLGEFFQAKYDWDLLAARSIWAFGPEIDGPNILVDDTLPSEARFWIMDTSVDKNRLNACRESIVQGFQWGCREGPLCDEPIRNAKFKIIDATIAAEPIHRGGGQV 165
            +VADP  +FCETVVETSSLKCF+ETPNKRNK+TMIAEPLE GLA DIE+G V + WDRK LGEFFQ KYDWDLLAARSIWAFGP+  GPNILVDDTLPSE         VDK+ L++ ++SIVQGFQWG REGPLC+EPIRN KFKI+DA IA EP+HRGGGQ+
Sbjct:   47 EVADPVVSFCETVVETSSLKCFAETPNKRNKLTMIAEPLERGLAEDIEAGAVCVTWDRKRLGEFFQTKYDWDLLAARSIWAFGPDSTGPNILVDDTLPSE---------VDKHLLSSVKDSIVQGFQWGTREGPLCEEPIRNVKFKILDAVIAQEPLHRGGGQI 201

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BLAST of mRNA_H-paniculata_contig21777.5756.1 vs. uniprot
Match: T1H0Q6_MEGSC (EFG_IV domain-containing protein n=1 Tax=Megaselia scalaris TaxID=36166 RepID=T1H0Q6_MEGSC)

HSP 1 Score: 251 bits (640), Expect = 3.750e-82
Identity = 121/165 (73.33%), Postives = 136/165 (82.42%), Query Frame = 0

Query:    1 VKVADPSTAFCETVVETSSLKCFSETPNKRNKITMIAEPLENGLAVDIESGEVSIEWDRKTLGEFFQAKYDWDLLAARSIWAFGPEIDGPNILVDDTLPSEARFWIMDTSVDKNRLNACRESIVQGFQWGCREGPLCDEPIRNAKFKIIDATIAAEPIHRGGGQV 165
            +KVADP  AFCETVVETSSLKCF+ETPNK+NKITMIAEPLE GLA DIE+  VSI W++K +GEFFQ  YDWDLLAARSIWAFGP+  GPNILVDDTLPSE         VDK+ L + ++SIVQGFQWG REGPLC+EPIRN KFKI+DA IA E +HRGGGQV
Sbjct:   13 IKVADPVVAFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENETVSINWNKKKIGEFFQVNYDWDLLAARSIWAFGPDTTGPNILVDDTLPSE---------VDKSLLTSVKDSIVQGFQWGTREGPLCEEPIRNVKFKILDAVIANEALHRGGGQV 168

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BLAST of mRNA_H-paniculata_contig21777.5756.1 vs. uniprot
Match: A0A2R7WG64_ONCFA (EFG_IV domain-containing protein n=1 Tax=Oncopeltus fasciatus TaxID=7536 RepID=A0A2R7WG64_ONCFA)

HSP 1 Score: 254 bits (649), Expect = 6.370e-82
Identity = 121/165 (73.33%), Postives = 137/165 (83.03%), Query Frame = 0

Query:    1 VKVADPSTAFCETVVETSSLKCFSETPNKRNKITMIAEPLENGLAVDIESGEVSIEWDRKTLGEFFQAKYDWDLLAARSIWAFGPEIDGPNILVDDTLPSEARFWIMDTSVDKNRLNACRESIVQGFQWGCREGPLCDEPIRNAKFKIIDATIAAEPIHRGGGQV 165
            +KVADP  +FCETVVETSSLKCF+ETPNKRNKITMI+EPLE GLA DIE+  V+I W+RK LGEFFQ KYDWDLLAARSIWAFGP+  GPNILVDDTLPSE         VDK  L + ++SI+QGFQWG REGPLC+EPIRN KFKI+DA IA EP+HRGGGQ+
Sbjct:  127 IKVADPVVSFCETVVETSSLKCFAETPNKRNKITMISEPLEKGLAEDIENQVVNINWNRKRLGEFFQTKYDWDLLAARSIWAFGPDATGPNILVDDTLPSE---------VDKTLLGSVKDSIIQGFQWGTREGPLCEEPIRNVKFKILDAVIAPEPLHRGGGQI 282

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig21777.5756.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig21777.5756.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5L308_9PHAE	2.110e-96	90.91	Tr-type G domain-containing protein n=2 Tax=Ectoca...	[more]
A0A7S2CQL7_9STRA	3.540e-88	80.00	Hypothetical protein n=1 Tax=Florenciella parvula ...	[more]
A0A7S2V928_9STRA	1.240e-87	76.97	Hypothetical protein n=1 Tax=Fibrocapsa japonica T...	[more]
A0A7S2WR47_9STRA	1.310e-84	76.97	Hypothetical protein n=1 Tax=Rhizochromulina marin...	[more]
A0A6I9MIT2_9TELE	9.720e-83	75.15	116 kDa U5 small nuclear ribonucleoprotein compone...	[more]
A0A1D2A5Z7_AUXPR	1.280e-82	75.15	Uncharacterized protein (Fragment) n=1 Tax=Auxenoc...	[more]
A0A7R9DCR9_TIMPO	1.450e-82	74.55	Hypothetical protein n=1 Tax=Timema poppense TaxID...	[more]
UPI001FA412BA	1.580e-82	74.39	Uncharacterized protein n=1 Tax=Spodoptera exigua ...	[more]
T1H0Q6_MEGSC	3.750e-82	73.33	EFG_IV domain-containing protein n=1 Tax=Megaselia...	[more]
A0A2R7WG64_ONCFA	6.370e-82	73.33	EFG_IV domain-containing protein n=1 Tax=Oncopeltu...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005517	Translation elongation factor EFG/EF2, domain IV	SMART	SM00889	EFG_IV_2	coord: 51..167 e-value: 4.9E-4 score: 14.9
IPR005517	Translation elongation factor EFG/EF2, domain IV	PFAM	PF03764	EFG_IV	coord: 55..165 e-value: 5.0E-17 score: 61.8
IPR014721	Ribosomal protein S5 domain 2-type fold, subgroup	GENE3D	3.30.230.10		coord: 15..168 e-value: 7.8E-57 score: 193.2
None	No IPR available	PANTHER	PTHR42908:SF6	116 KDA U5 SMALL NUCLEAR RIBONUCLEOPROTEIN COMPONENT	coord: 1..166
None	No IPR available	PANTHER	PTHR42908	FAMILY NOT NAMED	coord: 1..166
IPR020568	Ribosomal protein S5 domain 2-type fold	SUPERFAMILY	54211	Ribosomal protein S5 domain 2-like	coord: 9..167

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig21777	contig	H-paniculata_contig21777:351..1585 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig21777.5756.1	mRNA_H-paniculata_contig21777.5756.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig21777 351..1585 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig21777.5756.1 ID=prot_H-paniculata_contig21777.5756.1|Name=mRNA_H-paniculata_contig21777.5756.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=170bp
VKVADPSTAFCETVVETSSLKCFSETPNKRNKITMIAEPLENGLAVDIES
GEVSIEWDRKTLGEFFQAKYDWDLLAARSIWAFGPEIDGPNILVDDTLPS
EARFWIMDTSVDKNRLNACRESIVQGFQWGCREGPLCDEPIRNAKFKIID
ATIAAEPIHRGGGQVCALE*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR005517	Transl_elong_EFG/EF2_IV
IPR014721	Ribosomal_S5_D2-typ_fold_subgr
IPR020568	Ribosomal_S5_D2-typ_fold