prot_H-paniculata_contig21640.5717.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig21640.5717.1
Unique Name	prot_H-paniculata_contig21640.5717.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	119

Homology

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BLAST of mRNA_H-paniculata_contig21640.5717.1 vs. uniprot
Match: A0A6H5K164_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K164_9PHAE)

HSP 1 Score: 107 bits (268), Expect = 8.020e-25
Identity = 47/119 (39.50%), Postives = 74/119 (62.18%), Query Frame = 0

Query:    1 MKPDRALYSLKQAGRQWNTRLVNELVDFGIENCMAEPCVSREMVDDKITLIPSVHVDGMAMVGREDGCNRLFDAFSGKNSMTNLRGWSWYTGCSFSRDWSKGTLTMDQTVFVDNLMERF 119
            +K +RA+Y LKQ+GRQW     + LV+ G E C A+PCV R+MVD+ + +I  ++VD + + G ++ C  L  + + K    NL    W+ GC+  RD   GTL + QT ++D+++ERF
Sbjct:  514 LKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVDAGTLRISQTAYIDSMVERF 632

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BLAST of mRNA_H-paniculata_contig21640.5717.1 vs. uniprot
Match: A0A6H5JC10_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC10_9PHAE)

HSP 1 Score: 107 bits (267), Expect = 1.110e-24
Identity = 47/118 (39.83%), Postives = 73/118 (61.86%), Query Frame = 0

Query:    2 KPDRALYSLKQAGRQWNTRLVNELVDFGIENCMAEPCVSREMVDDKITLIPSVHVDGMAMVGREDGCNRLFDAFSGKNSMTNLRGWSWYTGCSFSRDWSKGTLTMDQTVFVDNLMERF 119
            K +RA+Y LKQ+GRQW     + LV+ G E C A+PCV R+MVD+ + +I  ++VD + + G ++ C  L  + S K    NL    W+ GC+  RD   GTL + QT ++D++++RF
Sbjct:  434 KAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLSKKFPTKNLEECQWFDGCAIERDVETGTLRISQTAYIDSMVKRF 551

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BLAST of mRNA_H-paniculata_contig21640.5717.1 vs. uniprot
Match: A0A6H5JQW4_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQW4_9PHAE)

HSP 1 Score: 107 bits (267), Expect = 1.140e-24
Identity = 47/119 (39.50%), Postives = 74/119 (62.18%), Query Frame = 0

Query:    1 MKPDRALYSLKQAGRQWNTRLVNELVDFGIENCMAEPCVSREMVDDKITLIPSVHVDGMAMVGREDGCNRLFDAFSGKNSMTNLRGWSWYTGCSFSRDWSKGTLTMDQTVFVDNLMERF 119
            +K +RA+Y LKQ+GRQW     + LV+ G E C A+PCV R+MVD+ + +I  ++VD + + G ++ C  L  + + K    NL    W+ GC+  RD   GTL + QT ++D+++ERF
Sbjct:  988 VKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERF 1106

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BLAST of mRNA_H-paniculata_contig21640.5717.1 vs. uniprot
Match: A0A6H5JQN6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQN6_9PHAE)

HSP 1 Score: 107 bits (266), Expect = 1.520e-24
Identity = 47/118 (39.83%), Postives = 73/118 (61.86%), Query Frame = 0

Query:    2 KPDRALYSLKQAGRQWNTRLVNELVDFGIENCMAEPCVSREMVDDKITLIPSVHVDGMAMVGREDGCNRLFDAFSGKNSMTNLRGWSWYTGCSFSRDWSKGTLTMDQTVFVDNLMERF 119
            K +RA+Y LKQ+GRQW     + LV+ G E C A+PCV R+MVD+ + +I  ++VD + + G ++ C  L  + + K    NL    W+ GC+  RD   GTL + QT ++D+++ERF
Sbjct:  471 KAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVDAGTLRISQTAYIDSMVERF 588

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BLAST of mRNA_H-paniculata_contig21640.5717.1 vs. uniprot
Match: A0A6H5K1V1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1V1_9PHAE)

HSP 1 Score: 107 bits (266), Expect = 1.520e-24
Identity = 46/118 (38.98%), Postives = 73/118 (61.86%), Query Frame = 0

Query:    2 KPDRALYSLKQAGRQWNTRLVNELVDFGIENCMAEPCVSREMVDDKITLIPSVHVDGMAMVGREDGCNRLFDAFSGKNSMTNLRGWSWYTGCSFSRDWSKGTLTMDQTVFVDNLMERF 119
            K +RA+Y LKQ+GRQW     + LV+ G E C A+PCV R+MVD+ + +I  +HVD + + G ++ C  L  +F+ +    NL    W+ GC+  RD   G L + QT ++D++++RF
Sbjct:  450 KAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIHVDDILVAGSDEDCEELLASFNKRFPSKNLGECEWFDGCAIERDVDAGALKISQTAYIDSMVKRF 567

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BLAST of mRNA_H-paniculata_contig21640.5717.1 vs. uniprot
Match: A0A6H5KSG8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG8_9PHAE)

HSP 1 Score: 107 bits (266), Expect = 1.560e-24
Identity = 47/118 (39.83%), Postives = 73/118 (61.86%), Query Frame = 0

Query:    2 KPDRALYSLKQAGRQWNTRLVNELVDFGIENCMAEPCVSREMVDDKITLIPSVHVDGMAMVGREDGCNRLFDAFSGKNSMTNLRGWSWYTGCSFSRDWSKGTLTMDQTVFVDNLMERF 119
            K +RA+Y LKQ+GRQW     + LV+ G E C A+PCV R+MVD+ + +I  ++VD + + G ++ C  L  + + K    NL    W+ GC+  RD   GTL + QT ++D+++ERF
Sbjct:  880 KAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERF 997

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BLAST of mRNA_H-paniculata_contig21640.5717.1 vs. uniprot
Match: A0A6H5JZQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ8_9PHAE)

HSP 1 Score: 107 bits (266), Expect = 1.580e-24
Identity = 47/118 (39.83%), Postives = 73/118 (61.86%), Query Frame = 0

Query:    2 KPDRALYSLKQAGRQWNTRLVNELVDFGIENCMAEPCVSREMVDDKITLIPSVHVDGMAMVGREDGCNRLFDAFSGKNSMTNLRGWSWYTGCSFSRDWSKGTLTMDQTVFVDNLMERF 119
            K +RA+Y LKQ+GRQW     + LV+ G E C A+PCV R+MVD+ + +I  ++VD + + G ++ C  L  + + K    NL    W+ GC+  RD   GTL + QT ++D+++ERF
Sbjct: 1259 KAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERF 1376

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BLAST of mRNA_H-paniculata_contig21640.5717.1 vs. uniprot
Match: A0A6H5KF60_9PHAE (Uncharacterized protein n=12 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF60_9PHAE)

HSP 1 Score: 107 bits (266), Expect = 1.580e-24
Identity = 47/118 (39.83%), Postives = 73/118 (61.86%), Query Frame = 0

Query:    2 KPDRALYSLKQAGRQWNTRLVNELVDFGIENCMAEPCVSREMVDDKITLIPSVHVDGMAMVGREDGCNRLFDAFSGKNSMTNLRGWSWYTGCSFSRDWSKGTLTMDQTVFVDNLMERF 119
            K +RA+Y LKQ+GRQW     + LV+ G E C A+PCV R+MVD+ + +I  ++VD + + G ++ C  L  + + K    NL    W+ GC+  RD   GTL + QT ++D+++ERF
Sbjct: 1422 KAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERF 1539

[Close]

BLAST of mRNA_H-paniculata_contig21640.5717.1 vs. uniprot
Match: A0A6H5JIS9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIS9_9PHAE)

HSP 1 Score: 101 bits (252), Expect = 2.400e-24
Identity = 42/119 (35.29%), Postives = 73/119 (61.34%), Query Frame = 0

Query:    1 MKPDRALYSLKQAGRQWNTRLVNELVDFGIENCMAEPCVSREMVDDKITLIPSVHVDGMAMVGREDGCNRLFDAFSGKNSMTNLRGWSWYTGCSFSRDWSKGTLTMDQTVFVDNLMERF 119
            ++ +RA+Y LKQ+GRQW     + LV+ G E C A+PCV R+MVD+ + ++  ++VD + + G ++ C  L  + + K    N   + W+ GC+  RD   GT  + QT ++D++++RF
Sbjct:   98 VQAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMVIVIYVDDILVAGSDEDCEELLASLNKKFPTKNRGEYEWFDGCAIDRDVEPGTFKISQTAYIDSMVKRF 216

[Close]

BLAST of mRNA_H-paniculata_contig21640.5717.1 vs. uniprot
Match: A0A6H5K1N9_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1N9_9PHAE)

HSP 1 Score: 106 bits (264), Expect = 2.890e-24
Identity = 46/119 (38.66%), Postives = 74/119 (62.18%), Query Frame = 0

Query:    1 MKPDRALYSLKQAGRQWNTRLVNELVDFGIENCMAEPCVSREMVDDKITLIPSVHVDGMAMVGREDGCNRLFDAFSGKNSMTNLRGWSWYTGCSFSRDWSKGTLTMDQTVFVDNLMERF 119
            +K +RA+Y LKQ+GRQW   + + LV+ G E C A+PCV R+MVD+ + +I  ++VD + + G ++ C  L  + + K    NL    W+ GC+  RD   GTL + QT ++D+++ RF
Sbjct:  912 VKAERAIYGLKQSGRQWGYHVADTLVENGFEQCKADPCVFRKMVDEVVVMIIMIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVARF 1030

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig21640.5717.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig21640.5717.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5K164_9PHAE	8.020e-25	39.50	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JC10_9PHAE	1.110e-24	39.83	Reverse transcriptase Ty1/copia-type domain-contai...	[more]
A0A6H5JQW4_9PHAE	1.140e-24	39.50	Reverse transcriptase Ty1/copia-type domain-contai...	[more]
A0A6H5JQN6_9PHAE	1.520e-24	39.83	Reverse transcriptase Ty1/copia-type domain-contai...	[more]
A0A6H5K1V1_9PHAE	1.520e-24	38.98	Reverse transcriptase Ty1/copia-type domain-contai...	[more]
A0A6H5KSG8_9PHAE	1.560e-24	39.83	Reverse transcriptase Ty1/copia-type domain-contai...	[more]
A0A6H5JZQ8_9PHAE	1.580e-24	39.83	Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KF60_9PHAE	1.580e-24	39.83	Uncharacterized protein n=12 Tax=Ectocarpus sp. CC...	[more]
A0A6H5JIS9_9PHAE	2.400e-24	35.29	Reverse transcriptase Ty1/copia-type domain-contai...	[more]
A0A6H5K1N9_9PHAE	2.890e-24	38.66	Uncharacterized protein (Fragment) n=1 Tax=Ectocar...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 4..118 e-value: 8.1E-8 score: 32.2

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig21640	contig	H-paniculata_contig21640:3038..3394 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig21640.5717.1	mRNA_H-paniculata_contig21640.5717.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig21640 2646..3394 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig21640.5717.1 ID=prot_H-paniculata_contig21640.5717.1|Name=mRNA_H-paniculata_contig21640.5717.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=119bp
MKPDRALYSLKQAGRQWNTRLVNELVDFGIENCMAEPCVSREMVDDKITL
IPSVHVDGMAMVGREDGCNRLFDAFSGKNSMTNLRGWSWYTGCSFSRDWS
KGTLTMDQTVFVDNLMERF

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR013103	RVT_2