prot_H-paniculata_contig21628.5710.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig21628.5710.1
Unique Nameprot_H-paniculata_contig21628.5710.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length69
Homology
[Close]
BLAST of mRNA_H-paniculata_contig21628.5710.1 vs. uniprot
Match: A0A6H5KBH3_9PHAE (Protein-tyrosine-phosphatase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KBH3_9PHAE)

HSP 1 Score: 51.2 bits (121), Expect = 8.740e-6
Identity = 32/68 (47.06%), Postives = 39/68 (57.35%), Query Frame = 0 
Query:    1 MTAEQALQRVDAYYRTRSPPIVAPGGKVASFAVDGTEAGVKGDRYRLSPDTEEQEEQVRLFFTKILKR 68
            ++AEQ+L RVD YYRTR        G VA            G   R+SP+T EQEEQVRLFF ++L R
Sbjct:  349 LSAEQSLNRVDRYYRTR--------GTVAI-----------GKSSRVSPETPEQEEQVRLFFKQVLNR 397
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig21628.5710.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KBH3_9PHAE8.740e-647.06Protein-tyrosine-phosphatase n=2 Tax=Ectocarpus Ta... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig21628contigH-paniculata_contig21628:1278..1484 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig21628.5710.1mRNA_H-paniculata_contig21628.5710.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig21628 1211..1525 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig21628.5710.1 ID=prot_H-paniculata_contig21628.5710.1|Name=mRNA_H-paniculata_contig21628.5710.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=69bp
MTAEQALQRVDAYYRTRSPPIVAPGGKVASFAVDGTEAGVKGDRYRLSPD
TEEQEEQVRLFFTKILKR*
back to top