prot_H-paniculata_contig21626.5709.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig21626.5709.1
Unique Nameprot_H-paniculata_contig21626.5709.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length83
Homology
BLAST of mRNA_H-paniculata_contig21626.5709.1 vs. uniprot
Match: D7G1J7_ECTSI (Ubiquinone Biosynthesis Monooxygenase COQ6 (C-terminal region) Ubiquinone Biosynthesis Monooxygenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1J7_ECTSI)

HSP 1 Score: 134 bits (338), Expect = 3.020e-35
Identity = 67/82 (81.71%), Postives = 74/82 (90.24%), Query Frame = 0
Query:    1 QVLTPRLGFDLSLRQAHSYIGERAALVGDAAHTIHPMAGQGLNLGMADADALARAVLDGRRSGTDVGSAILLARYEEERKVQ 82
            +V+TPRLGFDLSLRQAH Y G+R ALVGDAAHT+HPMAGQGLNLG+ADADALARAVL+GR SGTDVGS  LL RYEEERK +
Sbjct:  442 EVVTPRLGFDLSLRQAHKYTGDRMALVGDAAHTVHPMAGQGLNLGIADADALARAVLEGRLSGTDVGSKTLLGRYEEERKTE 523          
BLAST of mRNA_H-paniculata_contig21626.5709.1 vs. uniprot
Match: A0A6H5KUH3_9PHAE (FAD_binding_3 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUH3_9PHAE)

HSP 1 Score: 129 bits (324), Expect = 1.170e-33
Identity = 64/82 (78.05%), Postives = 72/82 (87.80%), Query Frame = 0
Query:    1 QVLTPRLGFDLSLRQAHSYIGERAALVGDAAHTIHPMAGQGLNLGMADADALARAVLDGRRSGTDVGSAILLARYEEERKVQ 82
            +V+TPRLGFDLSLRQAH Y G R ALVGDAAHT+HPMAGQGLNLG+ADADALARAVL+GR SGTDVGS  LL  YE++RK +
Sbjct:  344 EVVTPRLGFDLSLRQAHRYTGARMALVGDAAHTVHPMAGQGLNLGIADADALARAVLEGRLSGTDVGSTTLLGHYEQDRKTE 425          
BLAST of mRNA_H-paniculata_contig21626.5709.1 vs. uniprot
Match: A0A835Z6E6_9STRA (Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6E6_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 5.260e-22
Identity = 47/78 (60.26%), Postives = 62/78 (79.49%), Query Frame = 0
Query:    5 PRLGFDLSLRQAHSYIGERAALVGDAAHTIHPMAGQGLNLGMADADALARAVLDGRRSGTDVGSAILLARYEEERKVQ 82
            PRLGFDLSL Q+ +Y   R ALVGDAAHT+HPMAGQGLNLG++DA+ALA A+ +   SG D+GS   L+RY+ +R+++
Sbjct:  381 PRLGFDLSLAQSAAYTAPRVALVGDAAHTVHPMAGQGLNLGLSDAEALAAAIREAALSGGDIGSVQALSRYDSDRRMR 458          
BLAST of mRNA_H-paniculata_contig21626.5709.1 vs. uniprot
Match: UPI000BBE5065 (ubiquinone biosynthesis monooxygenase COQ6, mitochondrial-like n=1 Tax=Brassica napus TaxID=3708 RepID=UPI000BBE5065)

HSP 1 Score: 94.7 bits (234), Expect = 3.470e-21
Identity = 47/75 (62.67%), Postives = 57/75 (76.00%), Query Frame = 0
Query:    6 RLGFDLSLRQAHSYIGERAALVGDAAHTIHPMAGQGLNLGMADADALARAVLDGRRSGTDVGSAILLARYEEERK 80
            R+ F LSLR A  Y+  R ALVGD+AHT+HP+AGQG+NLG ADA AL+RA+ +G   GTD+G A LL RYE ERK
Sbjct:  253 RMMFPLSLRHAKDYVSNRVALVGDSAHTVHPLAGQGVNLGFADASALSRAIAEGIALGTDIGEANLLKRYEAERK 327          
BLAST of mRNA_H-paniculata_contig21626.5709.1 vs. uniprot
Match: A0A7S3XZA2_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XZA2_HETAK)

HSP 1 Score: 89.4 bits (220), Expect = 4.340e-21
Identity = 41/75 (54.67%), Postives = 55/75 (73.33%), Query Frame = 0
Query:    6 RLGFDLSLRQAHSYIGERAALVGDAAHTIHPMAGQGLNLGMADADALARAVLDGRRSGTDVGSAILLARYEEERK 80
            R G DL L+QA  + G R ALVGDAAHT+HPMAGQGLNLG+ D + L   +++G ++G D+GS  LLA Y+ +R+
Sbjct:    4 RFGLDLRLQQARRFAGRRLALVGDAAHTVHPMAGQGLNLGLGDVEKLTEIIIEGLKTGQDIGSPTLLATYDSDRR 78          
BLAST of mRNA_H-paniculata_contig21626.5709.1 vs. uniprot
Match: C0P9B1_MAIZE (Uncharacterized protein n=2 Tax=Zea mays TaxID=4577 RepID=C0P9B1_MAIZE)

HSP 1 Score: 94.4 bits (233), Expect = 4.530e-21
Identity = 45/81 (55.56%), Postives = 60/81 (74.07%), Query Frame = 0
Query:    1 QVLTPRLGFDLSLRQAHSYIGERAALVGDAAHTIHPMAGQGLNLGMADADALARAVLDGRRSGTDVGSAILLARYEEERKV 81
            +V++ R+ F LSL  +H Y+ +R ALVGDAAHT+HP+AGQG+NLG  DA ALA+ + +G   G+DVG   LL RYE+ERK 
Sbjct:  241 RVVSERMAFPLSLMHSHDYVSKRLALVGDAAHTVHPLAGQGVNLGFGDAAALAKVIAEGVSVGSDVGDLTLLQRYEKERKA 321          
BLAST of mRNA_H-paniculata_contig21626.5709.1 vs. uniprot
Match: UPI00053C995C (ubiquinone biosynthesis monooxygenase COQ6, mitochondrial isoform X1 n=2 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C995C)

HSP 1 Score: 95.1 bits (235), Expect = 4.950e-21
Identity = 46/77 (59.74%), Postives = 58/77 (75.32%), Query Frame = 0
Query:    6 RLGFDLSLRQAHSYIGERAALVGDAAHTIHPMAGQGLNLGMADADALARAVLDGRRSGTDVGSAILLARYEEERKVQ 82
            R+ F LSLR A  Y  +R AL+GDAAHT+HP+AGQG+NLG ADA AL++A+ +G   GTD+G A LL RYE ERK +
Sbjct:  385 RMAFPLSLRHAKDYASKRVALIGDAAHTVHPLAGQGVNLGFADASALSKAITEGIALGTDIGEANLLRRYERERKSE 461          
BLAST of mRNA_H-paniculata_contig21626.5709.1 vs. uniprot
Match: A0A804P699_MAIZE (Uncharacterized protein n=2 Tax=Zea mays TaxID=4577 RepID=A0A804P699_MAIZE)

HSP 1 Score: 94.4 bits (233), Expect = 5.320e-21
Identity = 45/81 (55.56%), Postives = 60/81 (74.07%), Query Frame = 0
Query:    1 QVLTPRLGFDLSLRQAHSYIGERAALVGDAAHTIHPMAGQGLNLGMADADALARAVLDGRRSGTDVGSAILLARYEEERKV 81
            +V++ R+ F LSL  +H Y+ +R ALVGDAAHT+HP+AGQG+NLG  DA ALA+ + +G   G+DVG   LL RYE+ERK 
Sbjct:  260 RVVSERMAFPLSLMHSHDYVSKRLALVGDAAHTVHPLAGQGVNLGFGDAAALAKVIAEGVSVGSDVGDLTLLQRYEKERKA 340          
BLAST of mRNA_H-paniculata_contig21626.5709.1 vs. uniprot
Match: A0A6J0P7C4_RAPSA (Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial n=13 Tax=Brassicaceae TaxID=3700 RepID=A0A6J0P7C4_RAPSA)

HSP 1 Score: 94.7 bits (234), Expect = 6.620e-21
Identity = 47/75 (62.67%), Postives = 57/75 (76.00%), Query Frame = 0
Query:    6 RLGFDLSLRQAHSYIGERAALVGDAAHTIHPMAGQGLNLGMADADALARAVLDGRRSGTDVGSAILLARYEEERK 80
            R+ F LSLR A  Y+  R ALVGD+AHT+HP+AGQG+NLG ADA AL+RA+ +G   GTD+G A LL RYE ERK
Sbjct:  374 RMMFPLSLRHAKDYVSNRVALVGDSAHTVHPLAGQGVNLGFADASALSRAIAEGIALGTDIGEANLLKRYEAERK 448          
BLAST of mRNA_H-paniculata_contig21626.5709.1 vs. uniprot
Match: A0A0D3D586_BRAOL (Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial n=1 Tax=Brassica oleracea var. oleracea TaxID=109376 RepID=A0A0D3D586_BRAOL)

HSP 1 Score: 94.7 bits (234), Expect = 7.710e-21
Identity = 47/75 (62.67%), Postives = 57/75 (76.00%), Query Frame = 0
Query:    6 RLGFDLSLRQAHSYIGERAALVGDAAHTIHPMAGQGLNLGMADADALARAVLDGRRSGTDVGSAILLARYEEERK 80
            R+ F LSLR A  Y+  R ALVGD+AHT+HP+AGQG+NLG ADA AL+RA+ +G   GTD+G A LL RYE ERK
Sbjct:  648 RMMFPLSLRHAKDYVSNRVALVGDSAHTVHPLAGQGVNLGFADASALSRAIAEGIALGTDIGEANLLKRYEAERK 722          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig21626.5709.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G1J7_ECTSI3.020e-3581.71Ubiquinone Biosynthesis Monooxygenase COQ6 (C-term... [more]
A0A6H5KUH3_9PHAE1.170e-3378.05FAD_binding_3 domain-containing protein n=1 Tax=Ec... [more]
A0A835Z6E6_9STRA5.260e-2260.26Ubiquinone biosynthesis monooxygenase COQ6, mitoch... [more]
UPI000BBE50653.470e-2162.67ubiquinone biosynthesis monooxygenase COQ6, mitoch... [more]
A0A7S3XZA2_HETAK4.340e-2154.67Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
C0P9B1_MAIZE4.530e-2155.56Uncharacterized protein n=2 Tax=Zea mays TaxID=457... [more]
UPI00053C995C4.950e-2159.74ubiquinone biosynthesis monooxygenase COQ6, mitoch... [more]
A0A804P699_MAIZE5.320e-2155.56Uncharacterized protein n=2 Tax=Zea mays TaxID=457... [more]
A0A6J0P7C4_RAPSA6.620e-2162.67Ubiquinone biosynthesis monooxygenase COQ6, mitoch... [more]
A0A0D3D586_BRAOL7.710e-2162.67Ubiquinone biosynthesis monooxygenase COQ6, mitoch... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00420RNGMNOXGNASEcoord: 21..36
score: 45.83
coord: 36..52
score: 45.88
NoneNo IPR availablePANTHERPTHR43876:SF7UBIQUINONE BIOSYNTHESIS MONOOXYGENASE COQ6, MITOCHONDRIALcoord: 2..81
NoneNo IPR availablePANTHERPTHR43876FAMILY NOT NAMEDcoord: 2..81
IPR002938FAD-binding domainPFAMPF01494FAD_binding_3coord: 10..80
e-value: 5.3E-12
score: 45.6
IPR036188FAD/NAD(P)-binding domain superfamilyGENE3D3.50.50.60coord: 11..79
e-value: 2.0E-25
score: 91.6
IPR036188FAD/NAD(P)-binding domain superfamilySUPERFAMILY51905FAD/NAD(P)-binding domaincoord: 9..80

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig21626contigH-paniculata_contig21626:436..1086 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig21626.5709.1mRNA_H-paniculata_contig21626.5709.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig21626 436..1086 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig21626.5709.1 ID=prot_H-paniculata_contig21626.5709.1|Name=mRNA_H-paniculata_contig21626.5709.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=83bp
QVLTPRLGFDLSLRQAHSYIGERAALVGDAAHTIHPMAGQGLNLGMADAD
ALARAVLDGRRSGTDVGSAILLARYEEERKVQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002938FAD-bd
IPR036188FAD/NAD-bd_sf