prot_H-paniculata_contig2162.5707.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2162.5707.1
Unique Nameprot_H-paniculata_contig2162.5707.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length212
Homology
BLAST of mRNA_H-paniculata_contig2162.5707.1 vs. uniprot
Match: A0A6H5L7W2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7W2_9PHAE)

HSP 1 Score: 346 bits (887), Expect = 4.990e-118
Identity = 169/203 (83.25%), Postives = 185/203 (91.13%), Query Frame = 0
Query:    4 KLQVHKRQEKNPILRHIRNVPYEITPGLLADFVLGPKACTVFISLRYHLLYPHYLIQRIKELSRHFTLRVLLCHVDVDDCEKCLLDINRMAVLNDFTFVLAWSLQEAARYLETYKSYEQKSAESIQEKVDNDYLAKLQDCFGVVRSVNKSDILTLASNFGSLKAVCDASAGELALCPGLGDKKVARIHEALHEPLSHAHRVKR 206
            K+QVHKRQEKN +LRH+RNV +EITPGL+ADFVLGPK C VFISLRYHLLYPHYLIQRIKELS HFTLRVLLCHVDVDD E  LL+IN+MAV NDFT VLAWSLQEAARYLETYK+YE KSA+SIQEKVD+D+L KLQDCFGVVRSVNKSD+LTLASNFGSLKAVCDA+AGEL+LCPGLG+KKV+RIHEALHEPL   H   R
Sbjct:   80 KIQVHKRQEKNSMLRHLRNVAFEITPGLVADFVLGPKTCAVFISLRYHLLYPHYLIQRIKELSGHFTLRVLLCHVDVDDSETPLLEINKMAVFNDFTLVLAWSLQEAARYLETYKAYEHKSADSIQEKVDDDFLGKLQDCFGVVRSVNKSDVLTLASNFGSLKAVCDATAGELSLCPGLGEKKVSRIHEALHEPLVRKHSSSR 282          
BLAST of mRNA_H-paniculata_contig2162.5707.1 vs. uniprot
Match: D7G4P9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4P9_ECTSI)

HSP 1 Score: 246 bits (628), Expect = 1.600e-80
Identity = 126/161 (78.26%), Postives = 140/161 (86.96%), Query Frame = 0
Query:   54 YPHYLIQRIKELSRHFTLRVLLCHVDVDDCEKCLLDINRMAVLNDFTFVLAWSLQEAARYLETYKSYEQKSAESIQEKVDNDYLAKLQDCFGVVRSVNKSDILTLASNFGSLKAVCDASAGELALCPGLGDKKVARIHEALHEPLSHAH---RVKRSLPEG 211
            +PH  +Q   ELS HFTLRVLLCHVDVDD E  LL+IN+MAV NDFT VLAWSLQEAARYLETYK+YE KSA+SIQEKVD+D+L KLQDCFGVVRSVNKSD+LTLASNFGSLKAVCDA+AGEL+LCPGLG+KKVARIHEALHEPL   H   R+KR+  EG
Sbjct:    5 HPHIFMQ---ELSGHFTLRVLLCHVDVDDSETPLLEINKMAVFNDFTLVLAWSLQEAARYLETYKAYEHKSADSIQEKVDDDFLGKLQDCFGVVRSVNKSDVLTLASNFGSLKAVCDATAGELSLCPGLGEKKVARIHEALHEPLVRKHSSSRLKRNRTEG 162          
BLAST of mRNA_H-paniculata_contig2162.5707.1 vs. uniprot
Match: A0A835ZCX2_9STRA (Restriction endonuclease type II-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCX2_9STRA)

HSP 1 Score: 211 bits (538), Expect = 1.120e-65
Identity = 103/182 (56.59%), Postives = 134/182 (73.63%), Query Frame = 0
Query:   20 IRNVPYEITPGLLADFVLGPKACTVFISLRYHLLYPHYLIQRIKELSRHFTLRVLLCHVDVDDCEKCLLDINRMAVLNDFTFVLAWSLQEAARYLETYKSYEQKSAESIQEKVDNDYLAKLQDCFGVVRSVNKSDILTLASNFGSLKAVCDASAGELALCPGLGDKKVARIHEALHEPLSHA 201
            IRNV YE   G++ DFV+ P AC +F+S+RYH L P Y+ QRI+EL   F LR+LL  VD DD    LL++N+MAV  +FT +LAWS  EAARYLET+K++E K   SIQEKV++DYLAK QD    V +VN++D++TL S FGSL+ +C+AS  E+ALCPGLGDKKV  +H+ALH+P   A
Sbjct:    7 IRNVEYEFATGIMPDFVISPTACALFLSMRYHQLKPTYIAQRIEELRTSFRLRLLLVLVDQDDNVNLLLELNKMAVARNFTLLLAWSWPEAARYLETFKAFENKPPTSIQEKVNSDYLAKAQDALCTVHAVNRTDVVTLLSTFGSLQGLCEASMEEMALCPGLGDKKVVALHDALHQPFFSA 188          
BLAST of mRNA_H-paniculata_contig2162.5707.1 vs. uniprot
Match: A0A5C7I906_9ROSI (Uncharacterized protein n=1 Tax=Acer yangbiense TaxID=1000413 RepID=A0A5C7I906_9ROSI)

HSP 1 Score: 213 bits (541), Expect = 2.960e-64
Identity = 102/204 (50.00%), Postives = 144/204 (70.59%), Query Frame = 0
Query:    7 VHKRQEKNPILRHIRNVPYEITPGLLADFVLGPKACTVFISLRYHLLYPHYLIQRIKELSRHFTLRVLLCHVDVDDCEKCLLDINRMAVLNDFTFVLAWSLQEAARYLETYKSYEQKSAESIQEKVDNDYLAKLQDCFGVVRSVNKSDILTLASNFGSLKAVCDASAGELALCPGLGDKKVARIHEALHEPLSHAHRVKRSLPE 210
            V  RQ+ NP+L+HIRNV +     ++ D++LG  +C +++SLRYHLL+P YL  RI+EL ++F LRV+LCH+DVDD  K LL++ + A+L+D T + AWSL+E  RYLET K YE K A+ IQ ++D+DYL++L      VRSVNK+D++TL S FGSL  + DAS  +LA CPG+G++KV R+H+  HEP         S+PE
Sbjct:  105 VSHRQKGNPLLKHIRNVRWAFA-DVVCDYMLGQNSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVVLCHIDVDDVVKPLLEVTKTAMLHDCTLLCAWSLEECGRYLETIKVYENKPADLIQGQMDSDYLSRLTHSLTTVRSVNKTDVVTLGSTFGSLSHIMDASMEDLARCPGIGERKVKRLHDTFHEPFKRVVTSHPSVPE 307          
BLAST of mRNA_H-paniculata_contig2162.5707.1 vs. uniprot
Match: A0A0D9XLL6_9ORYZ (HHH_2 domain-containing protein n=1 Tax=Leersia perrieri TaxID=77586 RepID=A0A0D9XLL6_9ORYZ)

HSP 1 Score: 212 bits (539), Expect = 5.030e-64
Identity = 102/195 (52.31%), Postives = 140/195 (71.79%), Query Frame = 0
Query:    7 VHKRQEKNPILRHIRNVPYEITPGLLADFVLGPKACTVFISLRYHLLYPHYLIQRIKELSRHFTLRVLLCHVDVDDCEKCLLDINRMAVLNDFTFVLAWSLQEAARYLETYKSYEQKSAESIQEKVDNDYLAKLQDCFGVVRSVNKSDILTLASNFGSLKAVCDASAGELALCPGLGDKKVARIHEALHEPLSHA 201
            V  RQ+ NP+L+HIRN  +     ++ D+VLG  +C ++ISLRYHLL+P YL  RIKEL ++F LRV+LCH+DV+D  K L ++ R A+L+D T +  WSL+E  RYLET K YE KSA+SI+E +DNDYL++L      +R VNK+D++TL S+FGSL  V +AS  ELA CPG+G++KV R+H+  HEP   A
Sbjct:  111 VSHRQKGNPLLKHIRNARWTYA-DIVPDYVLGQSSCALYISLRYHLLHPDYLYYRIKELQKNFKLRVILCHIDVEDVVKPLHEVTRTALLHDCTLLCGWSLEECGRYLETIKVYENKSADSIREHMDNDYLSRLTHALTSIRHVNKTDVVTLGSSFGSLSQVMNASMEELARCPGIGERKVKRLHDTFHEPFKRA 304          
BLAST of mRNA_H-paniculata_contig2162.5707.1 vs. uniprot
Match: J3N456_ORYBR (HHH_2 domain-containing protein n=1 Tax=Oryza brachyantha TaxID=4533 RepID=J3N456_ORYBR)

HSP 1 Score: 211 bits (538), Expect = 6.220e-64
Identity = 100/195 (51.28%), Postives = 140/195 (71.79%), Query Frame = 0
Query:    7 VHKRQEKNPILRHIRNVPYEITPGLLADFVLGPKACTVFISLRYHLLYPHYLIQRIKELSRHFTLRVLLCHVDVDDCEKCLLDINRMAVLNDFTFVLAWSLQEAARYLETYKSYEQKSAESIQEKVDNDYLAKLQDCFGVVRSVNKSDILTLASNFGSLKAVCDASAGELALCPGLGDKKVARIHEALHEPLSHA 201
            V  RQ+ NP+L+HIRN  +     ++ D+VLG  +C +++S+RYHLL+P YL  RI+EL ++F LRV+LCH+DV+D  K L ++ R A+L+D T +  WSL+E  RYLET K YE KSA+SI+E +DNDYL++L      +R VNK+D++TL SNFGSL  V +AS  ELA CPG+G++KV R+H+  HEP   A
Sbjct:  103 VSHRQKGNPLLKHIRNARWTFA-DVVPDYVLGQSSCALYLSVRYHLLHPDYLYYRIRELQKNFKLRVILCHIDVEDVVKPLHEVTRTAILHDCTLLCGWSLEECGRYLETIKVYENKSADSIREHMDNDYLSRLTHALTSIRHVNKTDVVTLGSNFGSLSQVMNASMEELARCPGIGERKVKRLHDTFHEPFKRA 296          
BLAST of mRNA_H-paniculata_contig2162.5707.1 vs. uniprot
Match: A0A7J8YLC7_GOSAI (Uncharacterized protein n=6 Tax=Malvoideae TaxID=214907 RepID=A0A7J8YLC7_GOSAI)

HSP 1 Score: 208 bits (530), Expect = 2.170e-63
Identity = 100/204 (49.02%), Postives = 140/204 (68.63%), Query Frame = 0
Query:    7 VHKRQEKNPILRHIRNVPYEITPGLLADFVLGPKACTVFISLRYHLLYPHYLIQRIKELSRHFTLRVLLCHVDVDDCEKCLLDINRMAVLNDFTFVLAWSLQEAARYLETYKSYEQKSAESIQEKVDNDYLAKLQDCFGVVRSVNKSDILTLASNFGSLKAVCDASAGELALCPGLGDKKVARIHEALHEPLSHAHRVKRSLPE 210
            V  RQ+ NP+L+HIRNV +     +  D++LG   C +++SLRYHLL+P YL  RI+EL ++F LRV+LCHVDV+D  K LL++ + A+L+D T +  WSL+E  RYLET K YE K A+ IQ ++D DYL++L      VR VNK+D++TL S FGSL ++ DAS  +LA CPG+G++KV R+H+  HEP         S+PE
Sbjct:   40 VSHRQKGNPLLKHIRNVRWAFA-DVACDYLLGQNTCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVVLCHVDVEDVVKPLLEVTKTALLHDCTLLCGWSLEECGRYLETIKVYENKPADLIQGQMDTDYLSRLNHALTTVRRVNKTDVVTLGSTFGSLSSIMDASMEDLARCPGIGERKVKRLHDTFHEPFKRIVSSNPSVPE 242          
BLAST of mRNA_H-paniculata_contig2162.5707.1 vs. uniprot
Match: A0A2G3A240_CAPAN (DNA excision repair protein ERCC-1 n=4 Tax=Capsicum TaxID=4071 RepID=A0A2G3A240_CAPAN)

HSP 1 Score: 210 bits (534), Expect = 2.610e-63
Identity = 99/204 (48.53%), Postives = 143/204 (70.10%), Query Frame = 0
Query:    7 VHKRQEKNPILRHIRNVPYEITPGLLADFVLGPKACTVFISLRYHLLYPHYLIQRIKELSRHFTLRVLLCHVDVDDCEKCLLDINRMAVLNDFTFVLAWSLQEAARYLETYKSYEQKSAESIQEKVDNDYLAKLQDCFGVVRSVNKSDILTLASNFGSLKAVCDASAGELALCPGLGDKKVARIHEALHEPLSHAHRVKRSLPE 210
            V  RQ+ NP+L+HIRNV +     ++ D++LGP  C +++SLRYHLL+P YL  RI+EL ++F LR++LCHVDV+D  K LL++ R ++L+D T +  WSL+E  RYLET K YE K A+ IQ ++D DYL++L      +R VNK+D++TL S FGSL  V DAS  +LA CPG+G++KV R+++A HEP       ++ +PE
Sbjct:   99 VSNRQKGNPLLKHIRNVRWAFA-DIVCDYLLGPNTCALYLSLRYHLLHPDYLYFRIRELQKNFRLRIVLCHVDVEDVVKPLLEVTRTSLLHDCTLLCGWSLEECGRYLETVKVYENKPADLIQGQMDGDYLSRLNHALTAIRHVNKTDVVTLGSTFGSLSHVMDASMEDLARCPGIGERKVKRLYDAFHEPFKREVPKRQCIPE 301          
BLAST of mRNA_H-paniculata_contig2162.5707.1 vs. uniprot
Match: A0A1D1ZHX7_9ARAE (DNA excision repair protein ERCC-1 n=1 Tax=Anthurium amnicola TaxID=1678845 RepID=A0A1D1ZHX7_9ARAE)

HSP 1 Score: 207 bits (527), Expect = 2.650e-63
Identity = 97/192 (50.52%), Postives = 140/192 (72.92%), Query Frame = 0
Query:    7 VHKRQEKNPILRHIRNVPYEITPGLLADFVLGPKACTVFISLRYHLLYPHYLIQRIKELSRHFTLRVLLCHVDVDDCEKCLLDINRMAVLNDFTFVLAWSLQEAARYLETYKSYEQKSAESIQEKVDNDYLAKLQDCFGVVRSVNKSDILTLASNFGSLKAVCDASAGELALCPGLGDKKVARIHEALHEPL 198
            V  RQ+ NP+L+HIRNV +     ++ D++LG  +C ++ISLRYHLL+P Y+  RI+EL ++F LRV+LCH+DV+D  K LL++ R A+L+D + +  WSL+E  RYLET K YE KSA+SI+E++D DYL++L      +R VNK+D++TL S FGSL  + DAS  ELA CPG+G++KV R+++  HEP 
Sbjct:   18 VSHRQKGNPLLKHIRNVRWTFA-DVVCDYLLGQNSCALYISLRYHLLHPDYVYYRIRELQKNFKLRVVLCHIDVEDVAKPLLEVTRTALLHDCSLLCGWSLEECGRYLETIKVYENKSADSIREQMDTDYLSRLTHALTTIRHVNKTDVVTLGSAFGSLSRIMDASMEELARCPGIGERKVQRLYDTFHEPF 208          
BLAST of mRNA_H-paniculata_contig2162.5707.1 vs. uniprot
Match: O82008_LILLO (Nucleotide repair protein (Fragment) n=1 Tax=Lilium longiflorum TaxID=4690 RepID=O82008_LILLO)

HSP 1 Score: 206 bits (524), Expect = 4.030e-63
Identity = 97/192 (50.52%), Postives = 139/192 (72.40%), Query Frame = 0
Query:    7 VHKRQEKNPILRHIRNVPYEITPGLLADFVLGPKACTVFISLRYHLLYPHYLIQRIKELSRHFTLRVLLCHVDVDDCEKCLLDINRMAVLNDFTFVLAWSLQEAARYLETYKSYEQKSAESIQEKVDNDYLAKLQDCFGVVRSVNKSDILTLASNFGSLKAVCDASAGELALCPGLGDKKVARIHEALHEPL 198
            V  RQ+ NP+L+HIRNV + +   ++ D+++G  +C +++SLRYHLL+P YL  RI+EL ++F LRV+LCHVDV+D  K LL++ R A+L+D T +  WSL+E  RYLET K YE K A+SI+E++D DYL++L      VR VNK+D +TL + FGSL  + DAS  +LA CPG+G++KV R+H+  HEP 
Sbjct:   35 VSHRQKGNPLLKHIRNVKW-VFADIVCDYLVGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVVLCHVDVEDVVKPLLEVTRTAMLHDCTLLCGWSLEECGRYLETIKVYENKPADSIREQMDTDYLSRLTQALTSVRHVNKTDAVTLGTAFGSLSGIMDASLEDLARCPGIGERKVKRLHDTFHEPF 225          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2162.5707.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L7W2_9PHAE4.990e-11883.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G4P9_ECTSI1.600e-8078.26Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZCX2_9STRA1.120e-6556.59Restriction endonuclease type II-like protein n=1 ... [more]
A0A5C7I906_9ROSI2.960e-6450.00Uncharacterized protein n=1 Tax=Acer yangbiense Ta... [more]
A0A0D9XLL6_9ORYZ5.030e-6452.31HHH_2 domain-containing protein n=1 Tax=Leersia pe... [more]
J3N456_ORYBR6.220e-6451.28HHH_2 domain-containing protein n=1 Tax=Oryza brac... [more]
A0A7J8YLC7_GOSAI2.170e-6349.02Uncharacterized protein n=6 Tax=Malvoideae TaxID=2... [more]
A0A2G3A240_CAPAN2.610e-6348.53DNA excision repair protein ERCC-1 n=4 Tax=Capsicu... [more]
A0A1D1ZHX7_9ARAE2.650e-6350.52DNA excision repair protein ERCC-1 n=1 Tax=Anthuri... [more]
O82008_LILLO4.030e-6350.52Nucleotide repair protein (Fragment) n=1 Tax=Liliu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.150.20coord: 120..207
e-value: 1.2E-26
score: 94.1
NoneNo IPR availablePFAMPF14520HHH_5coord: 149..195
e-value: 1.6E-6
score: 28.6
NoneNo IPR availableGENE3D3.40.50.10130coord: 4..119
e-value: 3.1E-42
score: 144.9
NoneNo IPR availablePRODOMPD013585coord: 7..128
e-value: 2.0E-30
score: 329.0
IPR004579ERCC1/RAD10/SWI10 familyPFAMPF03834Rad10coord: 5..118
e-value: 1.1E-39
score: 134.9
IPR004579ERCC1/RAD10/SWI10 familyTIGRFAMTIGR00597TIGR00597coord: 7..115
e-value: 5.4E-36
score: 120.9
IPR004579ERCC1/RAD10/SWI10 familyPANTHERPTHR12749EXCISION REPAIR CROSS-COMPLEMENTING 1 ERCC1coord: 6..204
IPR010994RuvA domain 2-likeSUPERFAMILY47781RuvA domain 2-likecoord: 94..198
IPR011335Restriction endonuclease type II-likeSUPERFAMILY52980Restriction endonuclease-likecoord: 5..131

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2162contigH-paniculata_contig2162:17891..20076 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2162.5707.1mRNA_H-paniculata_contig2162.5707.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2162 17891..20079 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2162.5707.1 ID=prot_H-paniculata_contig2162.5707.1|Name=mRNA_H-paniculata_contig2162.5707.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=212bp
MGFKLQVHKRQEKNPILRHIRNVPYEITPGLLADFVLGPKACTVFISLRY
HLLYPHYLIQRIKELSRHFTLRVLLCHVDVDDCEKCLLDINRMAVLNDFT
FVLAWSLQEAARYLETYKSYEQKSAESIQEKVDNDYLAKLQDCFGVVRSV
NKSDILTLASNFGSLKAVCDASAGELALCPGLGDKKVARIHEALHEPLSH
AHRVKRSLPEG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004579ERCC1/RAD10/SWI10
IPR010994RuvA_2-like
IPR011335Restrct_endonuc-II-like