prot_H-paniculata_contig21586.5693.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig21586.5693.1
Unique Nameprot_H-paniculata_contig21586.5693.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length334
Homology
BLAST of mRNA_H-paniculata_contig21586.5693.1 vs. uniprot
Match: D7FJW1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJW1_ECTSI)

HSP 1 Score: 136 bits (342), Expect = 4.430e-32
Identity = 148/361 (41.00%), Postives = 173/361 (47.92%), Query Frame = 0
Query:    2 SRGLTPAAAYRANAAG----GGGDG---GLVVDEGGRGGEATSEAGGPTGSGAVNAVADMEDSIMRGPGQRK---------ADSAEELARKFRPQVDDILELERQLSKLGLETRAGRAGSAGGRATKARLRSGGAGGTPGAHLSSALGESFCLLNQSVIFGGGLAALATGAPPVDAAAVGSNGYXXXXXXXGGTRITXXXXXXXXXXXXDREMLFSR-----------PAIPPSSVALDSAASAGXXXXXXXXXERRPLHRNSDGTVTARDSLSRSYGT-HGVDGNVERIGWAAAASKAGDGVDGAARERHSPSSAGQQQQNMADQETQQAEIMRLLTCLKTLGDENLSLMKECEDRDKVR 334
            SR LTPA AYRA AAG    G GDG    +V           S + GP          DM+DSIMRG               D+A ELA+KFRPQ DD+LELERQL+KLGLE++ G     GGRA + RL SGGA      HLSSALG+SF  LN+SVIFGGG A    G  P +A   G NG         GTR+                    R           P IP S    D+                 P   N+ G     D+  R  G   G D      G   A   AG+G  G  R     SSA ++ + + ++E QQ EIMRLLTCLKTLGDEN+SLMKECEDRDKVR
Sbjct:   97 SRDLTPAEAYRAAAAGVKATGKGDGRRENVVXXXX----XXXSHSVGP----------DMDDSIMRGTVANGNAVEAKGGGCDAAAELAQKFRPQRDDLLELERQLAKLGLESKMG---GPGGRARQ-RLSSGGA-----PHLSSALGDSFFFLNKSVIFGGGGAG---GNGPANAYGNG-NGPAAGVLGSPGTRLGVTNPPGGGGGGWRSTSAPRRFNESDTSPEGAPQIP-SGRGSDNVGDGTRADGRVAGGGETPRVGNTVGR--GADTARRVQGPGSGADRPSAGAGGVWAGESAGEGGGGEGRPALLLSSAEEEARRVREEEAQQGEIMRLLTCLKTLGDENVSLMKECEDRDKVR 427          
BLAST of mRNA_H-paniculata_contig21586.5693.1 vs. uniprot
Match: A0A6H5KVB2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVB2_9PHAE)

HSP 1 Score: 126 bits (317), Expect = 8.400e-29
Identity = 124/303 (40.92%), Postives = 149/303 (49.17%), Query Frame = 0
Query:   54 MEDSIMRGPGQRK---------ADSAEELARKFRPQVDDILELERQLSKLGLETRAGRAGSAGGRATKARLRSGGAGGTPGAHLSSALGESFCLLNQSVIFGG----GLAALATGAPPVDAAAVGS-NGYXXXXXXXGGTR--ITXXXXXXXXXXXXDREMLFSRPAIP------PSSVALDSAASAGXXXXXXXXXERRPLHRNSDGTVTARDSLSRSYGTH-GVDGNVERIGWAAAASKAGDGVDGAARERHSPSSAGQQQQNMADQETQQAEIMRLLTCLKTLGDENLSLMKECEDRDKV 333
            M+DSIMRG               D+A ELA+KFRPQ DD+LELERQL+KLGLE++ G     GGRA + RL SGGA      HLSSALG+SF  LN+SVIFGG    G   +A G P   A A G+ NG         GTR  +T                     A P      PS    D+                 P   N+ G     D+  R  G   G D      G A A   A +G  G  R     SSA ++ + + ++E QQ EIMRLLTCLKTLGDEN+SLMKECE+RDK 
Sbjct:    1 MDDSIMRGTAANGNAVEANGGGCDAAAELAKKFRPQRDDLLELERQLAKLGLESKMG---GPGGRARQ-RLSSGGA-----PHLSSALGDSFFFLNKSVIFGGAGAGGNGLVAVGGP---ANAYGNGNGPAAGVLGSPGTRPGVTNPPGGGGGRSTSAPRRFNEGDASPEGAPQIPSGRGSDNVGDGTRADGRVAGGGEIPRVGNTVGR--GADTARRVQGPGCGADRPSAGAGGAWAGESAREGGGGEGRPSLLLSSAEEEARRVREEEAQQGEIMRLLTCLKTLGDENVSLMKECEERDKA 289          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig21586.5693.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FJW1_ECTSI4.430e-3241.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KVB2_9PHAE8.400e-2940.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig21586contigH-paniculata_contig21586:346..2448 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig21586.5693.1mRNA_H-paniculata_contig21586.5693.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig21586 346..2448 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig21586.5693.1 ID=prot_H-paniculata_contig21586.5693.1|Name=mRNA_H-paniculata_contig21586.5693.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=334bp
ASRGLTPAAAYRANAAGGGGDGGLVVDEGGRGGEATSEAGGPTGSGAVNA
VADMEDSIMRGPGQRKADSAEELARKFRPQVDDILELERQLSKLGLETRA
GRAGSAGGRATKARLRSGGAGGTPGAHLSSALGESFCLLNQSVIFGGGLA
ALATGAPPVDAAAVGSNGYGGGGGGAGGTRITGGGVGGTRVGGGDREMLF
SRPAIPPSSVALDSAASAGAVAAAAAAAERRPLHRNSDGTVTARDSLSRS
YGTHGVDGNVERIGWAAAASKAGDGVDGAARERHSPSSAGQQQQNMADQE
TQQAEIMRLLTCLKTLGDENLSLMKECEDRDKVR
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