mRNA_H-paniculata_contig21538.5681.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig21538.5681.1
Unique NamemRNA_H-paniculata_contig21538.5681.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig21538.5681.1 vs. uniprot
Match: A0A6H5KJN3_9PHAE (Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJN3_9PHAE)

HSP 1 Score: 446 bits (1147), Expect = 5.790e-134
Identity = 260/558 (46.59%), Postives = 333/558 (59.68%), Query Frame = 1
Query: 1474 STVSVMVDSGASGHYFDDTLIPGLRYKLFNYQELTVPRKITTAGGHQLAGVGQGLLRGHINDSEGVKRLVQISCLVVPGLGRNLFSVKQATRNGVVSIFDMNNPRLETNNFTVPLQELESD---LYFFSLEI----------TSGSGAPGLAMQAADTATLWHRRMGHLNRNSLNLLKTVDDNGVDFGGAVPDCDICAVGKSHQLAHPKTADNQVQRAFQLVMTDLMGPIMPEALGGFKYACKISDEYTRWTEIYLLKTKDGALHAFQSFIQSMVIPGGVRVERLRADKGGEFIGNDFRSYCRQTGVLLEFASTNTPQQIGMSERVGRTLAAMVRCMLADSGLPTFLWGELMFTAAYLANRAPHSALGMQSPHKMLKGTEPDLRHLRVIGARAFVHIERHTPKLALKAVEGRLVGYSNHSKSYRVYNPATRRIIESRNVVFIET---PPHLTPTGEPQLLIHPSSPSDSEGHNYATDDDFLRDLRDHTSVLAQPARVSVDHATASGVSSNPQVAELLERISTITRRDMLHDDATPREGT-------SPASPEGGEPPE 3078
            S++ ++VDSGA+ +Y D  L PG+R  + + ++L +P  I TAG H L GV  G+L G + D  G  R V    ++VPGLG NLFSV  A  NGV S+F  +NPRLE+ +  VP++    D       S+ I          T G    GLA++  +TA LWHRRMGH+N  SL++L+    +G+D+ G V DC  C +GKS Q  HPK A   V   FQLV  D +GP  P ALGGFKYA K  D++T+W E+ L+K K  ++ A + F +  VIP   R+  LRADKG EF    +R YC   G+ L+FAS NTP QIG +ER GRT+  +VRCMLADS LP+ LWGELM TA YL+NR PH+AL   +P+K L GT+  L HLRV+GARAFVH E HT KL  +A EGRLVGYS  SKSYR+YN  TRR+ ESRNV+FIET   PP L   G            D     YA  DD +RD+R++T+        SVD  + +    +P V ELLE IST+  RD+  + A P           S ASP G  PPE
Sbjct:  416 SSILMLVDSGATDNYLDPALTPGVRAHMRDIEDLRIPLPIITAGQHVLHGVTTGVLFGTVTDDSGQDRQVSFRVVLVPGLGTNLFSVTAALSNGVASLFYPDNPRLESADAVVPMKIQGVDNTGKITCSITIKLGAENGGRQTPGETPDGLALRV-ETADLWHRRMGHINNKSLDVLRQQAASGIDYRGDVQDCSACPLGKSSQQPHPKHAVYGVSTPFQLVFVDTLGPFTPTALGGFKYATKFVDQHTKWKEVVLMKDKTCSIDALELFNKGTVIPRSARIHVLRADKGTEFTNAAYRQYCLDVGIQLQFASPNTPHQIGANERAGRTIMNIVRCMLADSTLPSLLWGELMQTAVYLSNRTPHAALHNGTPYKALFGTDAHLGHLRVVGARAFVHEETHTKKLDSRAWEGRLVGYSLDSKSYRIYNAQTRRVRESRNVIFIETTPAPPSLDERG-----------FDDGEFTYADHDDMIRDVRNYTT------NHSVDALSPTHAVGDPSVLELLEDISTVHNRDLGTNSADPAPAAEDAPADDSLASPGGVSPPE 955          
BLAST of mRNA_H-paniculata_contig21538.5681.1 vs. uniprot
Match: A0A6H5JYB5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYB5_9PHAE)

HSP 1 Score: 431 bits (1109), Expect = 2.450e-128
Identity = 255/559 (45.62%), Postives = 327/559 (58.50%), Query Frame = 1
Query: 1474 STVSVMVDSGASGHYFDDTLIPGLRYKLFNYQELTVPRKITTAGGHQLAGVGQGLLRGHINDSEGVKRLVQISCLVVPGLGRNLFSVKQATRNGVVSIFDMNNPRLETNNFTVPLQELESD---LYFFSLEI----------TSGSGAPGLAMQAADTATLWHRRMGHLNRNSLNLLKTVDDNGVDFGGAVPDCDICAVGKSHQLAHPKTADNQVQRAFQLVMTDLMGPIMPEALGGFKYACKISDEYTRWTEIYLLKTKDG-ALHAFQSFIQSMVIPGGVRVERLRADKGGEFIGNDFRSYCRQTGVLLEFASTNTPQQIGMSERVGRTLAAMVRCMLADSGLPTFLWGELMFTAAYLANRAPHSALGMQSPHKMLKGTEPDLRHLRVIGARAFVHIERHTPKLALKAVEGRLVGYSNHSKSYRVYNPATRRIIESRNVVFIET---PPHLTPTGEPQLLIHPSSPSDSEGHNYATDDDFLRDLRDHTSVLAQPARVSVDHATASGVSSNPQVAELLERISTITRRDMLHDDATPREGT-------SPASPEGGEPPE 3078
            S++ ++ DSGA+ +Y D  L PG+R  + + ++L +P  I TAG H L GV  G+L G + D  G  R V    ++VPGLG NLFSV  A  NGV S+F  +NPRLE+ +  VP++    D       S+ I          T G    GLA++  +TA LWHRRMGH+N  SL++L+    +G+D+ G V DC  C +GKS Q  HPK A   V   FQLV  D  GP     LGGFKYA K  D++T+W E+ L+K K   ++   + F +  VIP   R+  LRA KG EF    +R YC   G+ L+FAS NTP QIG +ER GRT+  +VRCMLADS LP+ LWGELM TA YL+NR PH+AL   +P+K L GT+  L HLRV+GARAFVH E HT KL  +A EGRLVGYS  SKSYR+YN  TRR+ ESRNV+FIET   PP L   G            D     YA  DD +RD+R++T+        SVD  + +    +P V ELLE IST+  RD+  + A P           S ASP G  PPE
Sbjct:  321 SSILMLEDSGATDNYLDPALTPGVRAHMRDIEDLRIPLPIITAGQHVLHGVTTGVLFGTVTDDSGQDRQVSFRVVLVPGLGTNLFSVTAALSNGVASLFYPDNPRLESADAVVPMKIQGVDNTGKITCSITIKLGAENGGRQTPGETPDGLALRV-ETADLWHRRMGHINNKSLDVLRQQAASGIDYRGDVQDCSACPLGKSSQQPHPKHAVYGVSTPFQLVFVDTFGPFTSTTLGGFKYATKFVDQHTKWKEVVLMKDKTSCSIDGLELFNKGTVIPRSARIHVLRAGKGAEFTNAAYRQYCLDVGIQLQFASPNTPHQIGANERAGRTIMNIVRCMLADSTLPSLLWGELMQTAVYLSNRTPHAALHNGTPYKALFGTDAHLGHLRVVGARAFVHEETHTKKLDSRAWEGRLVGYSLDSKSYRIYNAQTRRVRESRNVIFIETNPAPPSLDERG-----------FDDGEFTYADHDDMIRDVRNYTT------NHSVDALSPTHAVGDPSVLELLEDISTVHNRDLGTNSADPAPAAEDAPADDSLASPGGVSPPE 861          
BLAST of mRNA_H-paniculata_contig21538.5681.1 vs. uniprot
Match: A0A6H5J842_9PHAE (Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J842_9PHAE)

HSP 1 Score: 433 bits (1113), Expect = 2.970e-125
Identity = 246/518 (47.49%), Postives = 315/518 (60.81%), Query Frame = 1
Query: 1474 STVSVMVDSGASGHYFDDTLIPGLRYKLFNYQELTVPRKITTAGGHQLAGVGQGLLRGHINDSEGVKRLVQISCLVVPGLGRNLFSVKQATRNGVVSIFDMNNPRLETNNFTVPLQELESD---LYFFSLEI----------TSGSGAPGLAMQAADTATLWHRRMGHLNRNSLNLLKTVDDNGVDFGGAVPDCDICAVGKSHQLAHPKTADNQVQRAFQLVMTDLMGPIMPEALGGFKYACKISDEYTRWTEIYLLKTKDGALHAFQSFIQSMVIPGGVRVERLRADKGGEFIGNDFRSYCRQTGVLLEFASTNTPQQIGMSERVGRTLAAMVRCMLADSGLPTFLWGELMFTAAYLANRAPHSALGMQSPHKMLKGTEPDLRHLRVIGARAFVHIERHTPKLALKAVEGRLVGYSNHSKSYRVYNPATRRIIESRNVVFIETPPHLTPTGEPQLLIHPSSPSDSEGHNYATDDDFLRDLRDHTSVLAQPARVSVDHATASGVSSNPQVAELLERIS 2988
            S++ ++VDSGA+ +Y D  L PG+R  + + ++L +P  I TAG H L GV  G+L G + D  G  R V    ++VPGLG NLFSV  A  NGV S+F  +NPRLE+ +  VP++    D       S+ I          T G    GLA++  +TA LWHRRMGH+N  SL++L+    +G+D+ G V DC  C +GKS Q  HPK A   V   FQLV  D +GP  P ALGGFKYA K  D++T+W E+ L+K K  ++ A + F +  VIP   R+  LRADKG EF    +R YC   G+ L+FAS NTP QIG +ER GRT+  +VRCMLADS LP+ LWGELM TA YL+NR PH+AL   +P+K L GT+  L HLRV+GARAFVH E HT KL  +A EGRLVGYS  SKSYR+YN  TRR+ ESRNV+FIE      PT  P  L       D     YA  DD +RD+R++T+        SVD    +    +P V ELLE IS
Sbjct:  416 SSILMLVDSGATDNYLDPALTPGVRAHMRDIEDLRIPLPIITAGQHVLHGVTTGVLFGTVTDDSGQDRRVSFRVMLVPGLGNNLFSVTAALSNGVASLFYPDNPRLESADAVVPMKIQGVDNTGKITCSITIKLGAENGGRQTPGETPDGLALRV-ETADLWHRRMGHINNKSLDVLRQQAASGIDYRGDVQDCSACPLGKSSQQPHPKHAVYGVSTPFQLVFVDTLGPFTPTALGGFKYATKFVDQHTKWKEVVLMKDKTCSIDALELFNKGTVIPRSARIHVLRADKGTEFTNAAYRQYCLDVGIQLQFASPNTPHQIGANERAGRTIMNIVRCMLADSTLPSLLWGELMQTAVYLSNRTPHAALHNGTPNKALFGTDAHLGHLRVVGARAFVHEETHTKKLDSRAWEGRLVGYSLDSKSYRIYNAQTRRVRESRNVMFIE------PTPAPPSLDERGF--DDGEFTYADHDDMIRDMRNYTT------NHSVDALPPTHAVGDPSVLELLEDIS 918          
BLAST of mRNA_H-paniculata_contig21538.5681.1 vs. uniprot
Match: A0A6H5JKW9_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKW9_9PHAE)

HSP 1 Score: 358 bits (920), Expect = 2.210e-102
Identity = 258/684 (37.72%), Postives = 343/684 (50.15%), Query Frame = 1
Query:  850 GGDGKPQWCSLHMTNNHSDEECRVLQRHNNNNQ------GANFAQWSSYSTVTGTGEQPPAISFNALKTPSTNNPSDNSSKAEDLWPFAPTSEPVA--AFDS---SGLFGAFGGVNG--------GETGGLSLTVNDGPEE---------GLELRRRANNMLQVIREAMSPLARVLAIMAV----------------VHYVWLMFGSSLYQRATSNNNLNSKPETFRGITDVDDGSALAAGPAFEKWNDDNNSTVSVMVDSGASGHYFDDTLIPGLRYKLFNYQELTVPRKITTAGGHQLAGVGQGLLRGHINDSEGVKRLVQISCLVVPGLGRNLFSVKQATRNGVVSIFDMNNPRLETNNFTVPLQELESDLYFFSLEITSGSGAPGLAMQAADTATLWHRRMGHLNRNSLNLLKTVDDNGVDFGGAVPDCDICAVGKSHQLAHPKTADNQVQRAFQLVMTDLMGPIMPEALGGFKYACKISDEYTRWTEIYLLKTKDGALHAFQSFIQSMVIPGGVRVERLRADKGGEFIGNDFRSYCRQTGVLLEFASTNTPQQIGMSERVGRTLAAMVRCMLADSGLPTFLWGELMFTAAYLANRAPHSALGMQSPHKMLKGTEPDLRHLRVIGARAFVHIERHTPKLALKAVEGRLVGYSNHSKSYRVYNPATRRIIESRNVVFIETP 2769
            GG  +P+WCS H T  HSD EC+  +    N Q       AN A   S S              N L+         N   A      A +S  VA  A  S   SG FGAF   +          +   + + V+ G  +         GL    R    L+V    ++   RVL  +A                 V +  ++  +S    +TSN   +  P  F G        A  A  +   +  D  S++ ++VD GA  +Y D  L PGLR  + + + L VP  I  AG   L GV  G + G + D  G  R V    ++VPGLG  LFSV  A   GV ++   +N RLE+ +   P+Q L        ++ T+G     + +++AD   LWHRRMGH+N  SL++L+    NGVD+ G V DC +C +GKS Q  HPK A   V R FQ V  D +GP  P AL GFK A K  D+  +          +G+L  F    +  V+P G R+  LR D+G EF   +FR YC+  G+ LEFA+ NTPQQIG ++R  RT+  +V C+LADS LP FLWGEL+ TA YL++R PH+AL   +P+K L G +  L HLRVIG+RAFVH E HT KL  +A EGRL GYS  SKSYR+YN  TRR+  SRNVVFIETP
Sbjct:  284 GGSVQPKWCSYHNTKTHSDAECQKQKEIRENKQKELEGLAANLALLQSASHA------------NFLRL-------SNKGSAH----LAQSSPAVAQQARQSRLRSGFFGAFMATHAELSLAPFRSDGSSIRMVVDRGARDNYLDPGLTPGLRAHMRDVKYLRVPHTIVAAGQRVLKGVATGTIFGAVTDDNGNDRHVSFC-VVLAASASASSTSNAQAHRLPSGFFGAF-----MATHAELSLAPFRSD-GSSIRMVVDRGARDNYLDPGLTPGLRAHMRDVKYLRVPHTIVAAGQRVLKGVATGTIFGAVTDDNGNDRHVSFCVVLVPGLGTKLFSVTLAMLKGVATLCHPDNHRLESGDVVFPMQTL-------GVDATTGKRIYSIEVESAD---LWHRRMGHINGKSLDVLRKEPVNGVDYTGDVKDCSVCPLGKSAQQPHPKQATYGVLRPFQHVSVDTLGPFTPTALSGFKVATKFVDQKDK-------ACSEGSLALFN---KGTVVPTGERIHCLRGDQGTEFTSAEFRQYCQDIGIELEFAAPNTPQQIGPNDRARRTILNVVHCLLADSTLPNFLWGELIQTAVYLSSRVPHAALQNGTPYKALYGKDAYLGHLRVIGSRAFVHEETHTRKLEHRAREGRL-GYSMDSKSYRIYNSETRRVRVSRNVVFIETP 916          
BLAST of mRNA_H-paniculata_contig21538.5681.1 vs. uniprot
Match: A0A6H5KL37_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL37_9PHAE)

HSP 1 Score: 343 bits (880), Expect = 6.250e-99
Identity = 194/419 (46.30%), Postives = 252/419 (60.14%), Query Frame = 1
Query: 1753 GVVSIFDMNNPRLETNNFTVPLQELESDLYFFSLEITSGSGAPGLAMQAADTATLWHRRMGHLNRNSLNLLKTVDDNGVDFGGAVPDCDICAVGKSHQLAHPKTADNQVQRAFQLVMTDLMGPIMPEALGGFKYACKISDEYTRWTEIYLLKTKDGALHAFQSFIQSMVIPGGVRVERLRADKGGEFIGNDFRSYCRQTGVLLEFASTNTPQQIGMSERVGRTLAAMVRCMLADSGLPTFLWGELMFTAAYLANRAPHSALGMQSPHKMLKGTEPDLRHLRVIGARAFVHIERHTPKLALKAVEGRLVGYSNHSKSYRVYNPATRRIIESRNVVFIETPPHLTPTGEPQLLIHPSSPSDSEGHNYATDDDFLRDLRDHTSVLAQPARVSVDHATASGVSSNPQVAELLERISTITRRDM 3009
            GV ++F  +NPRLE+ +   P+Q L        ++ T+G     + +++AD   LWHRRMGH+N  +L++L+    NGVD+ G V  C +C +GKS Q  HPK A   V R FQ    D +GP  P ALGG KYA K  D+ T+W EI L+K +  ++ +   F +  V+P G R+  LR D+G EF   +FR YC+  G+ LEFAS N PQQIG +ER GRT+  +VRC+LADS LP FLWGEL+ TA YL+NR PH+AL   +P+K L G +  L HLRVIG+RAFVH E HT KL  +A EGRLVGYS  SKSYR+YN  TRR+  SRNVVFIETPP      E           D     Y T DD +RD+R++T         S+D         +  V ELLE+I   T RD+
Sbjct:    4 GVATLFHPDNPRLESGDVFFPMQTL-------GVDATTGKRIYSIKVESAD---LWHRRMGHINGKNLDVLRKEQVNGVDYTGDVKYCSVCPLGKSAQQPHPKQATYGVLRPFQ---HDTLGPFAPTALGGSKYATKFVDQQTKWAEIVLMKDETCSVDSLALFNKGTVVPTGERIHCLRGDQGTEFTSAEFRQYCQDIGIKLEFASPNIPQQIGANERAGRTILNVVRCLLADSTLPNFLWGELIQTAVYLSNRVPHAALQNGTPYKALYGKDAYLGHLRVIGSRAFVHEETHTRKLEHRAWEGRLVGYSMDSKSYRIYNSETRRVRVSRNVVFIETPPVAPALDEFGF--------DDREFTYDTHDDMVRDVRNYT------FNHSIDSLPPDHDVGDIPVIELLEQIHETTNRDL 395          
BLAST of mRNA_H-paniculata_contig21538.5681.1 vs. uniprot
Match: A0A6H5JC75_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC75_9PHAE)

HSP 1 Score: 346 bits (888), Expect = 1.060e-97
Identity = 195/432 (45.14%), Postives = 252/432 (58.33%), Query Frame = 1
Query: 1537 PGLRYKLFNYQELTVPRKITTAGGHQLAGVGQGLLRGHINDSEGVKRLVQISCLVVPGLGRNLFSVKQATRNGVVSIFDMNNPRLETNNFTVPLQELESD------LYFFSLEITSGSGAPGLAMQAAD-------TATLWHRRMGHLNRNSLNLLKTVDDNGVDFGGAVPDCDICAVGKSHQLAHPKTADNQVQRAFQLVMTDLMGPIMPEALGGFKYACKISDEYTRWTEIYLLKTKDGALHAFQSFIQSMVIPGGVRVERLRADKGGEFIGNDFRSYCRQTGVLL-------EFASTNTPQQIGMSERVGRTLAAMVRCMLADSGLPTFLWGELMFTAAYLANRAPHSALGMQSPHKMLKGTEPDLRHLRVIGARAFVHIERHTPKLALKAVEGRLVGYSNHSKSYRVYNPATRRIIESRNVVFIETPP 2772
            PGLR  + + + L VP  I  AG H L GV  G   G + D  G  R V    ++VPGL  NLFSV  A   G  ++   ++PRLE+ +  +P+Q L  D      +Y   +++   +G P +   A D       +A LWHRRMGH+N   L++L+    NGVD+ G V DC +     +            V R FQ V  D +GP  P ALGGFKYA K  ++ T+W EI L+K K  ++ +   F +  V+P G R+  LR D+G EF   +FR YC+   + L       EFAS NTPQQIG + R GRT+  +VRC+LADS LP FLWGEL+ TA YL+NR PH+AL   +P+K L G +  L HLRVIG+RAFVH   HT KL  +A EGRLVGYS  SKSYR+YN  TRR+  SRNVVFIETPP
Sbjct:  452 PGLRAHMRDVEHLRVPHTIVAAGQHVLKGVATGTFFGAVTDDNGTDRHVSFCVILVPGLSTNLFSVTLAMLKGEATLVHPDDPRLESGDVVIPMQTLGVDTTTGKRIYSIEVKLGGEAGGPMVLEDAPDALALKVESADLWHRRMGHINGKRLDVLRKEPVNGVDYTGDVKDCHLRR--PAPLXXXXXXXXXXVLRPFQHVSVDTVGPFKPTALGGFKYATKFVEQQTKWEEIVLMKDKPCSVDSLALFNKGTVVPAGERIPCLRGDQGTEFTSAEFRQYCQNISIKLXNISIKLEFASPNTPQQIGANARAGRTILNVVRCLLADSTLPNFLWGELIQTAVYLSNRVPHAALQNGTPYKALYGKDAYLGHLRVIGSRAFVHEATHTRKLEHRAWEGRLVGYSTVSKSYRIYNSETRRVRVSRNVVFIETPP 881          
BLAST of mRNA_H-paniculata_contig21538.5681.1 vs. uniprot
Match: A0A6H5KY84_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY84_9PHAE)

HSP 1 Score: 342 bits (877), Expect = 2.060e-95
Identity = 184/444 (41.44%), Postives = 257/444 (57.88%), Query Frame = 1
Query: 1498 SGASGHYFDDTLIPGLRYKLFNYQELTVPRKITTAGGHQLAGVGQGLLRGHINDSEGVKRLVQISCLVVPGLGRNLFSVKQATRNGVVSIFDMNNPRLET-------NNFTVPLQELESDLYFFSLEITSGSGAPG---------------LAMQAADTATLWHRRMGHLNRNSLNLLKTVDDNGVDFGGAVPDCDICAVGKSHQLAHPKTADNQVQRAFQLVMTDLMGPIMPEALGGFKYACKISDEYTRWTEIYLLKTKDGALHAFQSFIQSMVIPGGVRVERLRADKGGEFIGNDFRSYCRQTGVLLEFASTNTPQQIGMSERVGRTLAAMVRCMLADSGLPTFLWGELMFTAAYLANRAPHSALGMQSPHKMLKGTEPDLRHLRVIGARAFVHIERHTPKLALKAVEGRLVGYSNHSKSYRVYNPATRRIIESRNVVFIE 2763
            SGASGHY D  L+P L   L ++  +T P KI  AGG +L G  +G++     D EG  R V+  C VVPGLGR+LFS   A + G  +I   + PR+E        +   + L+E+ + LYF  + + +                     +A   A+   LWHRR+ H ++  +     + + GV     +  C+ C + KS Q  HPKTA +   +  Q V TDL+GPI P A GGF Y  K +DEY+R   +YL++TKD A+   + FI  +VIP G R+ERLR+D GGE+    +  +C+  G++ EF +  TPQQ G+SER GRTL  +VRC+L    LP +LWGEL  TA ++ NR PH  L  ++P+  + G +  LRHLRVIG+ AFVH+E +  KLA +A  G LVGYS +S +YR+YNP T+RI+ SRNV FIE
Sbjct:  311 SGASGHYLDSELLPDLENILDDFTYITTPTKIIGAGGIELEGTSKGIISVFAKDEEGNDRRVRFKCTVVPGLGRHLFSTGTAQKKGANTIMS-DQPRIELPATSRDGSTIALVLREVGT-LYFLDVRLDTNQCERRRRITEENMNTYENSYVAAPRAEPYNLWHRRLAHCHKGIIEAAARIKETGVKLTDNLDPCETCKLQKSTQRKHPKTAKHTAVQPCQRVYTDLLGPISPPAKGGFNYVSKFTDEYSRMNVVYLIRTKDEAIDTLERFIDDIVIPNGFRLERLRSDCGGEYTAEYYTKFCKTIGIVQEFTAPATPQQNGISERAGRTLMNIVRCLLHGGQLPEYLWGELCCTAVHITNRLPHVHLNNETPYYRMFGKQASLRHLRVIGSSAFVHVETYKSKLANRAWPGILVGYSPNSNAYRIYNPHTKRIVPSRNVTFIE 752          
BLAST of mRNA_H-paniculata_contig21538.5681.1 vs. uniprot
Match: A0A6H5KVF6_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVF6_9PHAE)

HSP 1 Score: 325 bits (833), Expect = 1.980e-94
Identity = 174/423 (41.13%), Postives = 244/423 (57.68%), Query Frame = 1
Query: 1480 VSVMVDSGASGHYFDDTLIPGLRYKLFNYQELTVPRKITTAGGHQLAGVGQGLLRGHINDSEGVKRLVQISCLVVPGLGRNLFSVKQATRNGVVSIFDMNNPRLETNNFTVPLQELESDLYFFSLEIT-----SGSGAPGLAMQAADTAT--------------LWHRRMGHLNRNSLNLLKTVDDNGVDFGGAVPDCDICAVGKSHQLAHPKTADNQVQRAFQLVMTDLMGPIMPEAL---GGFKYACKISDEYTRWTEIYLLKTKDGALHAFQSFIQSMVIPGGVRVERLRADKGGEFIGNDFRSYCRQTGVLLEFASTNTPQQIGMSERVGRTLAAMVRCMLADSGLPTFLWGELMFTAAYLANRAPHSALGMQSPHKMLKGTEPDLRHLRVIGARAFVHIERHTPKLALKAVEGRLVGY 2682
            V ++VD+GAS   FD+ LIP     L +Y +   P+ +  AG  QL G   G+L   + D+ G +  V+I  L+VPGLGRN+FS     + G+  + + + P L      +PL +   D    +L+IT       SG   L      + T               WHRR+GHLN  SL++L+      VD+  ++  C +C + K  Q  HPK +  ++ R  QLV+ D MGP+ P A    G F YACK++D+YT+  E+YLL+ K     A  ++   +   GG R+E +R DKGGE  G++FR YC+ + + LE+A+TNTPQQIG+SER G+TLA + RC+L D   P  +WGELM TAAYL NR+PHSALG  +P+  L+   PDL  LRVIGARAFVH ER+  KL  +A EG+L G+
Sbjct:  206 VGLLVDTGASEPMFDNRLIPD--GNLHDYTQRNSPKIVDVAGERQLKGTATGILHCTVKDNRGQQLRVRIQGLIVPGLGRNIFSPTSLLKRGLRCVGEKSTPHLTIQGKVIPLTQDPRDQGMCTLDITFEQNVQPSGTKSLVPHQKQSQTHTANAVCFTLVSADTWHRRLGHLNARSLDILRKDTGTEVDYRDSLSPCGVCQIAKHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKVTDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLRNKSPDLSGLRVIGARAFVHHERYRKKLDDRAFEGKLCGF 626          
BLAST of mRNA_H-paniculata_contig21538.5681.1 vs. uniprot
Match: A0A6H5KAG6_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAG6_9PHAE)

HSP 1 Score: 327 bits (839), Expect = 2.190e-91
Identity = 187/492 (38.01%), Postives = 268/492 (54.47%), Query Frame = 1
Query: 1477 TVSVMVDSGASGHYFDDTLIPGLRYKLFNYQELTVPRKITTAGGHQLAGVGQGLLRGHINDSEGVKRLVQISCLVVPGLGRNLFSVKQATRNGVVSIFDMNNPRLETNNFTVPLQELES--DLYFFSLEITSGSGAP----------GLAMQAADT----------------------------------------ATLWHRRMGHLNRNSLNLLKTVDDNGVDFGGAVPDCDICAVGKSHQLAHPKTAD-NQVQRAFQLVMTDLMGPIMPEALGGFKYACKISDEYTRWTEIYLLKTKDGALHAFQSFIQSMVIPGGVRVERLRADKGGEFIGNDFRSYCRQTGVLLEFASTNTPQQIGMSERVGRTLAAMVRCMLADSGLPTFLWGELMFTAAYLANRAPHSALGMQSPHKMLKGTEPDLRHLRVIGARAFVHIERHTPKLALKAVEGRLVGYSNHSKSYRVYNPATRRIIESRNVVFIETPPHLTPTGE 2793
            T ++ VD+GAS H+ D+ LIP L  ++  Y ++  P  I  AG  QL G  +G L+  + D  G  R +++  + VP LGR+LFS   A + GV S F  +   L+T  F +PL+  ++   L+ F L I   S A            L  ++A+T                                        A  WH+R+GH N   L  L  +D +GV    +   C  C + KS Q  HPK A+ + +    QLV TDL+GPI P A+GG+ Y  K +D  TR   +Y +  K  AL +  +++Q + IP G+RV+ L +D GGE++ +DFR YCR TG++  F+S +TPQQ G+SER GRT+  M RC++ ++ LP  LWGE+  T+ +L NR PH AL   +P+  + G + +L  LR+IG+RAFVHIE HT KL  KA EG LVGY++ S ++R+YN  T RI  +RNV FIE PP + P  E
Sbjct:   42 TFTMTVDTGASNHFLDNELIPALEQRMVEYTKIDPPLLIHVAGQGQLHGTAKGALKVTVTDQNGNPRSIRLPFICVPKLGRHLFSGGTARKQGV-STFIGSTSFLDTGVFKIPLRPDDACDTLFHFDLAIAPDSVATHHAFSTISGLDLPTESANTVYTSASASSASSTTTGAVAGARPAXXXXXXXXXXXXXTASANTWHQRLGHPNVQVLEQLARIDGSGVHLRDSFSACGTCKINKSSQQNHPKIANMDGITERLQLVSTDLLGPISPSAIGGYNYMAKFTDHATRLKAVYFIAKKGDALSSLVNYVQDVAIPLGLRVQYLHSDNGGEYVNSDFRDYCRTTGIIQRFSSPHTPQQNGISERDGRTIMNMARCIINETNLPKHLWGEIAATSVFLINRLPHKALKGDTPYFRMFGKQANLSFLRIIGSRAFVHIEGHTTKLQAKAWEGVLVGYNDDSPTFRIYNRTTGRITSTRNVTFIEKPPAVLPIVE 532          
BLAST of mRNA_H-paniculata_contig21538.5681.1 vs. uniprot
Match: A0A6H5KJH6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJH6_9PHAE)

HSP 1 Score: 330 bits (846), Expect = 3.710e-90
Identity = 216/540 (40.00%), Postives = 277/540 (51.30%), Query Frame = 1
Query: 1642 RGHINDSEGVKRLVQISCLVVPGLGRNLFSVKQATRNGVVSIFDMNNPRLETNNFTVPLQELESD---LYFFSLEI----------TSGSGAPGLAMQAADTATLWHRRMGHLNRNSLNLLKTVDDNGVDFGGAVPDCDICAVGKSHQLAHPKTADNQVQRAFQLVMTDLMGPIMPEALGGFKYACKISDEYTRWTEIYLLKTKDGALHAFQSFIQSMVIPGGVRVERLRADKGGEFIGNDFRSYCRQTGVLLEFASTNTPQQIGMSERVGRTLAAMVRCMLADSGLPTFLWGELMFTAAYLANRAPHSALGMQSPHKMLKGTEPDLRHLRVIGARAFVHIERHTPKLALKAVEGRLVGYSNHSKSYRVYNPATRRII--------------------------------------ESRNVVFIET---PPHLTPTGEPQLLIHPSSPSDSEGHNYATDDDFLRDLRDHTSVLAQPARVSVDHATASGVSSNPQVAELLERISTITRRDMLHDDATPREGT-------SPASPEGGEPPE 3078
            RGH+ D          +C +VPGLG NLFSV  A  NGV S+F  +NPRLE+ +  VP++    D       S+ I          T G    GL ++  +TA LWHRRMGH+N  SL++L+    +G+D+ G V DC  C +GKS Q  HPK A   V   FQLV  D +GP  P ALGGFKYA K  D++T+W E+ L+K K  ++ A + F +  VIP   R+  LRADKG EF    +R YC   G+ L+FAS NTP QIG +ER GRT+  +VRCMLADS LP+ LWGELM TA YL+NR PH+AL           T+  L HLRV+GARAFVH E HT KL     + R V  SN +    ++N    + +                                      ESRN +FIET   PP L   G            D     YA  DD +RD+R++T+        SVD  + +    +P V ELLE IST+  RD+  + A P           S ASP G  PPE
Sbjct:  602 RGHVQDCS--------ACPLVPGLGTNLFSVTAALSNGVASLFYPDNPRLESADAVVPMKIQGVDNTGKITCSITIKLGAENGGRQTPGETPDGLPLRV-ETADLWHRRMGHINNKSLDVLRQQAASGIDYRGDVQDCSACPLGKSSQQPHPKHAVYGVSTPFQLVFVDTLGPFTPTALGGFKYATKFVDQHTKWKEVVLMKDKTCSIDALELFNKGTVIPRSARIHVLRADKGTEFTNAAYRQYCLDVGIQLQFASPNTPHQIGANERAGRTIMNIVRCMLADSTLPSLLWGELMQTAVYLSNRTPHAALHNXXXXXXXFSTDAHLGHLRVVGARAFVHEETHTKKL-----DSRXVYLSNRTPHAALHNGTPYKALFGTDAHLGHLRVVGARAFVHEETHTKKLDSRAWEGRRGESRNGIFIETNPAPPSLDERG-----------FDDGEFTYADHDDMIRDVRNYTT------NHSVDALSPTHAVGDPSVLELLEDISTVHNRDLGTNSADPAPAAEDAPADDSLASPGGVSPPE 1110          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig21538.5681.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KJN3_9PHAE5.790e-13446.59Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A6H5JYB5_9PHAE2.450e-12845.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J842_9PHAE2.970e-12547.49Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A6H5JKW9_9PHAE2.210e-10237.72Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KL37_9PHAE6.250e-9946.30Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JC75_9PHAE1.060e-9745.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KY84_9PHAE2.060e-9541.44Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KVF6_9PHAE1.980e-9441.13Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KAG6_9PHAE2.190e-9138.01Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KJH6_9PHAE3.710e-9040.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig21538contigH-paniculata_contig21538:725..4180 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score232.3
Seed ortholog evalue8.7e-58
Seed eggNOG ortholog4081.Solyc11g062200.1.1
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Mitochondrial protein
EggNOG OGs37THH@33090,3GG2K@35493,44UC5@71274,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelasterids
Best eggNOG OGNA|NA|NA
Exons1
Model size3456
Cds size2571
Stop0
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929582.550004-UTR-H-paniculata_contig21538:724..16091622929582.550004-UTR-H-paniculata_contig21538:724..1609Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig21538 725..1609 +
1691480923.370603-UTR-H-paniculata_contig21538:724..16091691480923.370603-UTR-H-paniculata_contig21538:724..1609Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig21538 725..1609 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929582.5635233-CDS-H-paniculata_contig21538:1609..41801622929582.5635233-CDS-H-paniculata_contig21538:1609..4180Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig21538 1610..4180 +
1691480923.381312-CDS-H-paniculata_contig21538:1609..41801691480923.381312-CDS-H-paniculata_contig21538:1609..4180Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig21538 1610..4180 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig21538.5681.1prot_H-paniculata_contig21538.5681.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig21538 1610..4180 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig21538.5681.1

>prot_H-paniculata_contig21538.5681.1 ID=prot_H-paniculata_contig21538.5681.1|Name=mRNA_H-paniculata_contig21538.5681.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=857bp
MTNNHSDEECRVLQRHNNNNQGANFAQWSSYSTVTGTGEQPPAISFNALK
TPSTNNPSDNSSKAEDLWPFAPTSEPVAAFDSSGLFGAFGGVNGGETGGL
SLTVNDGPEEGLELRRRANNMLQVIREAMSPLARVLAIMAVVHYVWLMFG
SSLYQRATSNNNLNSKPETFRGITDVDDGSALAAGPAFEKWNDDNNSTVS
VMVDSGASGHYFDDTLIPGLRYKLFNYQELTVPRKITTAGGHQLAGVGQG
LLRGHINDSEGVKRLVQISCLVVPGLGRNLFSVKQATRNGVVSIFDMNNP
RLETNNFTVPLQELESDLYFFSLEITSGSGAPGLAMQAADTATLWHRRMG
HLNRNSLNLLKTVDDNGVDFGGAVPDCDICAVGKSHQLAHPKTADNQVQR
AFQLVMTDLMGPIMPEALGGFKYACKISDEYTRWTEIYLLKTKDGALHAF
QSFIQSMVIPGGVRVERLRADKGGEFIGNDFRSYCRQTGVLLEFASTNTP
QQIGMSERVGRTLAAMVRCMLADSGLPTFLWGELMFTAAYLANRAPHSAL
GMQSPHKMLKGTEPDLRHLRVIGARAFVHIERHTPKLALKAVEGRLVGYS
NHSKSYRVYNPATRRIIESRNVVFIETPPHLTPTGEPQLLIHPSSPSDSE
GHNYATDDDFLRDLRDHTSVLAQPARVSVDHATASGVSSNPQVAELLERI
STITRRDMLHDDATPREGTSPASPEGGEPPEKTVAPSQDGASQSTETSST
EPPLNHPHHTHHQVTPAVTRAGVAARSFRERNANNDSPASTHLAAIANDK
TLSELRQLGLYTNALLPDVAHQTFEAESVVEYAYTTTSLLSCSVGEKAEK
IPNTFKE
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mRNA from alignment at H-paniculata_contig21538:725..4180+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig21538.5681.1 ID=mRNA_H-paniculata_contig21538.5681.1|Name=mRNA_H-paniculata_contig21538.5681.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3456bp|location=Sequence derived from alignment at H-paniculata_contig21538:725..4180+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
TCGATCCGGATTACCAATGGCAGACAACGACAAGGGTATTCAAGGGGTGC TGAAACTCTGCCCGAAATTCGATGGCAGAGGCAGAGCCAGTTTCAGGGAG TACAAAGACAAACTCCGGCTTGTACTTTCCCTCCACCACAAGGCGGCCGC AGATATTTTGCAGGGCCAGCCGAGACCCGAAACCACCCTAATCGGCGATG ACACGCCGCCCCGCAATGCGGCAGCCCTGATGGCGTGGGACAGTGCCAAC CATGACCTATTCAGTGTACTGTTTTTCAGCACAGAAAAATCCGCGAATAA TACCGTCAGACGCCATATGGGGAAAACCTACGACGATGGGGTAGGGAACG GGCAAGGAGCGTGGGCAGCGCTGCAATACAAGTATGACGGCAACACCAAG GAAGCACGGAGGGAGTGCCACGACAAACTCCACACAACAATGATGCAGTC CGGAGATGATCCGGAAGATTTCCTCTTCGTCATGGATGGTTATCGCGACC GTTTGGAGGAAATGGAGCAACCCATACCTGACGAACGCTACGAGGACATT ATTCTCCGAGCCCTCCCCGCTGAGTACGAAAGGGTTCGTATTGCCAGTTG CGAGAAACGTGACTTCAATTTGGCGGACATTCGACACATGGTTAGCACCA TGTACACCGACTACCTCTCCCGCCCGAATACCGCAAACCTGGTCGCAGGC CGCGGAGTCGCCATGCAGGCAAGTGGGGGAAGTGATGGCGGCAGAAGGAA CCACATAACATGTTTCTTTTGCGGGAAGCGAGGCCACCTGAAAAGAGACT GCACCGCTCGGAATAAGGGCCAAGCGGTGACCGGGGAACACAAAAAAATG GGGGAGACGGGAAACCACAATGGTGCTCTCTCCACATGACCAACAACCAC AGTGACGAAGAATGCCGTGTCTTGCAAAGACACAACAACAACAACCAGGG AGCAAACTTTGCACAGTGGTCAAGCTACTCCACAGTCACCGGCACAGGGG AACAGCCTCCGGCCATCTCTTTCAACGCCTTGAAAACGCCGAGCACGAAC AATCCCTCGGACAATTCCTCAAAGGCGGAGGACCTCTGGCCGTTCGCCCC CACAAGCGAACCTGTTGCTGCTTTCGACAGCAGCGGGCTCTTCGGTGCCT TCGGAGGGGTCAACGGCGGGGAGACTGGGGGGCTGTCTCTCACAGTGAAC GACGGGCCAGAAGAGGGACTGGAGCTTCGGCGCCGAGCTAACAATATGCT GCAGGTGATCAGGGAGGCAATGTCTCCACTAGCCCGTGTATTAGCGATAA TGGCCGTGGTACATTACGTCTGGTTAATGTTCGGTAGCTCATTATACCAG CGGGCAACATCGAACAATAACCTCAACAGCAAGCCTGAAACATTTCGCGG CATCACCGACGTGGATGATGGGTCGGCCCTTGCGGCGGGACCGGCCTTTG AAAAGTGGAACGACGACAACAACAGTACTGTCAGCGTAATGGTGGACAGT GGGGCGTCGGGGCACTACTTCGACGATACCCTTATTCCCGGATTGCGGTA CAAACTCTTCAACTACCAGGAGCTAACTGTACCGCGTAAGATCACAACCG CAGGAGGGCATCAATTGGCAGGGGTCGGCCAGGGACTGCTACGCGGGCAC ATCAACGACAGCGAAGGGGTAAAACGTTTGGTTCAGATCTCGTGCTTGGT CGTACCTGGCTTGGGGCGGAACTTGTTCTCCGTCAAGCAAGCGACACGAA ACGGAGTTGTATCCATTTTCGACATGAACAACCCGAGGCTAGAAACGAAC AACTTCACCGTCCCGCTCCAGGAGCTGGAGAGCGATCTATATTTCTTCTC GCTGGAAATAACCAGCGGTAGCGGCGCGCCTGGACTGGCAATGCAAGCTG CAGATACCGCCACACTTTGGCATCGGCGAATGGGACACTTGAATCGCAAC AGTTTGAACCTCCTGAAGACGGTCGATGACAACGGGGTGGACTTCGGTGG AGCCGTACCGGATTGTGACATTTGTGCCGTTGGGAAAAGTCATCAACTGG CTCATCCGAAGACAGCCGACAACCAAGTGCAACGCGCCTTCCAGCTAGTC ATGACAGATTTGATGGGACCGATCATGCCGGAGGCGCTCGGGGGCTTCAA GTACGCTTGCAAAATTTCCGACGAGTACACGAGATGGACGGAGATTTACC TCCTGAAGACCAAGGACGGAGCACTTCACGCATTCCAGTCATTCATACAG TCAATGGTCATTCCCGGCGGCGTTCGGGTCGAGCGACTAAGGGCGGACAA AGGGGGTGAGTTTATTGGCAACGATTTTAGAAGCTACTGCCGGCAGACAG GCGTATTGCTAGAGTTCGCAAGCACCAACACACCACAACAAATCGGTATG TCAGAACGCGTCGGGAGGACGCTCGCAGCCATGGTCCGGTGCATGCTTGC CGACAGCGGTTTGCCAACCTTTCTCTGGGGGGAACTGATGTTCACAGCGG CGTATCTTGCAAACAGAGCACCACACTCCGCGCTCGGCATGCAATCTCCT CATAAGATGCTGAAGGGAACGGAACCGGATCTTCGACACCTTCGAGTTAT CGGAGCCAGAGCTTTCGTACATATCGAGCGGCACACCCCAAAACTCGCTC TTAAGGCAGTCGAAGGACGGTTAGTTGGGTACAGTAATCACAGCAAGAGC TACCGGGTCTACAATCCGGCCACCCGACGTATCATTGAGAGCAGGAACGT CGTCTTCATCGAGACGCCACCACATCTTACGCCAACGGGGGAGCCACAAC TTCTGATACACCCGTCTTCACCTAGCGACAGTGAGGGCCACAATTACGCC ACCGACGACGACTTCTTACGTGATCTTCGCGATCACACCTCCGTACTAGC TCAACCAGCTCGTGTGTCTGTCGATCATGCCACTGCCAGCGGGGTCTCTA GCAATCCACAGGTGGCCGAGCTTCTGGAAAGGATCAGTACCATCACCCGG CGGGATATGCTGCACGACGATGCCACACCTCGTGAAGGGACGTCACCAGC ATCACCGGAAGGCGGCGAACCGCCGGAGAAAACTGTGGCTCCTTCACAGG ACGGAGCTAGCCAGTCCACGGAGACATCATCAACCGAACCACCGCTCAAC CACCCTCACCACACTCATCACCAAGTGACTCCTGCGGTGACACGCGCGGG TGTCGCAGCACGCTCCTTCAGGGAACGCAACGCCAACAACGACAGCCCAG CTTCCACGCATCTTGCAGCAATTGCCAACGACAAAACGCTCTCCGAGCTA CGACAACTGGGACTATACACCAATGCGCTCCTACCGGATGTCGCACATCA AACGTTTGAGGCAGAATCAGTCGTGGAGTATGCCTACACCACGACCAGCC TCCTAAGCTGTTCGGTGGGGGAGAAAGCTGAAAAAATCCCAAACACGTTC AAGGAG
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Coding sequence (CDS) from alignment at H-paniculata_contig21538:725..4180+

>mRNA_H-paniculata_contig21538.5681.1 ID=mRNA_H-paniculata_contig21538.5681.1|Name=mRNA_H-paniculata_contig21538.5681.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=5142bp|location=Sequence derived from alignment at H-paniculata_contig21538:725..4180+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGACCAACAACCACAGTGACGAAGAATGCCGTGTCTTGCAAAGACACAA
CAACAACAACCAGGGAGCAAACTTTGCACAGTGGTCAAGCTACTCCACAG
TCACCGGCACAGGGGAACAGCCTCCGGCCATCTCTTTCAACGCCTTGAAA
ACGCCGAGCACGAACAATCCCTCGGACAATTCCTCAAAGGCGGAGGACCT
CTGGCCGTTCGCCCCCACAAGCGAACCTGTTGCTGCTTTCGACAGCAGCG
GGCTCTTCGGTGCCTTCGGAGGGGTCAACGGCGGGGAGACTGGGGGGCTG
TCTCTCACAGTGAACGACGGGCCAGAAGAGGGACTGGAGCTTCGGCGCCG
AGCTAACAATATGCTGCAGGTGATCAGGGAGGCAATGTCTCCACTAGCCC
GTGTATTAGCGATAATGGCCGTGGTACATTACGTCTGGTTAATGTTCGGT
AGCTCATTATACCAGCGGGCAACATCGAACAATAACCTCAACAGCAAGCC
TGAAACATTTCGCGGCATCACCGACGTGGATGATGGGTCGGCCCTTGCGG
CGGGACCGGCCTTTGAAAAGTGGAACGACGACAACAACAGTACTGTCAGC
GTAATGGTGGACAGTGGGGCGTCGGGGCACTACTTCGACGATACCCTTAT
TCCCGGATTGCGGTACAAACTCTTCAACTACCAGGAGCTAACTGTACCGC
GTAAGATCACAACCGCAGGAGGGCATCAATTGGCAGGGGTCGGCCAGGGA
CTGCTACGCGGGCACATCAACGACAGCGAAGGGGTAAAACGTTTGGTTCA
GATCTCGTGCTTGGTCGTACCTGGCTTGGGGCGGAACTTGTTCTCCGTCA
AGCAAGCGACACGAAACGGAGTTGTATCCATTTTCGACATGAACAACCCG
AGGCTAGAAACGAACAACTTCACCGTCCCGCTCCAGGAGCTGGAGAGCGA
TCTATATTTCTTCTCGCTGGAAATAACCAGCGGTAGCGGCGCGCCTGGAC
TGGCAATGCAAGCTGCAGATACCGCCACACTTTGGCATCGGCGAATGGGA
CACTTGAATCGCAACAGTTTGAACCTCCTGAAGACGGTCGATGACAACGG
GGTGGACTTCGGTGGAGCCGTACCGGATTGTGACATTTGTGCCGTTGGGA
AAAGTCATCAACTGGCTCATCCGAAGACAGCCGACAACCAAGTGCAACGC
GCCTTCCAGCTAGTCATGACAGATTTGATGGGACCGATCATGCCGGAGGC
GCTCGGGGGCTTCAAGTACGCTTGCAAAATTTCCGACGAGTACACGAGAT
GGACGGAGATTTACCTCCTGAAGACCAAGGACGGAGCACTTCACGCATTC
CAGTCATTCATACAGTCAATGGTCATTCCCGGCGGCGTTCGGGTCGAGCG
ACTAAGGGCGGACAAAGGGGGTGAGTTTATTGGCAACGATTTTAGAAGCT
ACTGCCGGCAGACAGGCGTATTGCTAGAGTTCGCAAGCACCAACACACCA
CAACAAATCGGTATGTCAGAACGCGTCGGGAGGACGCTCGCAGCCATGGT
CCGGTGCATGCTTGCCGACAGCGGTTTGCCAACCTTTCTCTGGGGGGAAC
TGATGTTCACAGCGGCGTATCTTGCAAACAGAGCACCACACTCCGCGCTC
GGCATGCAATCTCCTCATAAGATGCTGAAGGGAACGGAACCGGATCTTCG
ACACCTTCGAGTTATCGGAGCCAGAGCTTTCGTACATATCGAGCGGCACA
CCCCAAAACTCGCTCTTAAGGCAGTCGAAGGACGGTTAGTTGGGTACAGT
AATCACAGCAAGAGCTACCGGGTCTACAATCCGGCCACCCGACGTATCAT
TGAGAGCAGGAACGTCGTCTTCATCGAGACGCCACCACATCTTACGCCAA
CGGGGGAGCCACAACTTCTGATACACCCGTCTTCACCTAGCGACAGTGAG
GGCCACAATTACGCCACCGACGACGACTTCTTACGTGATCTTCGCGATCA
CACCTCCGTACTAGCTCAACCAGCTCGTGTGTCTGTCGATCATGCCACTG
CCAGCGGGGTCTCTAGCAATCCACAGGTGGCCGAGCTTCTGGAAAGGATC
AGTACCATCACCCGGCGGGATATGCTGCACGACGATGCCACACCTCGTGA
AGGGACGTCACCAGCATCACCGGAAGGCGGCGAACCGCCGGAGAAAACTG
TGGCTCCTTCACAGGACGGAGCTAGCCAGTCCACGGAGACATCATCAACC
GAACCACCGCTCAACCACCCTCACCACACTCATCACCAAGTGACTCCTGC
GGTGACACGCGCGGGTGTCGCAGCACGCTCCTTCAGGGAACGCAACGCCA
ACAACGACAGCCCAGCTTCCACGCATCTTGCAGCAATTGCCAACGACAAA
ACGCTCTCCGAGCTACGACAACTGGGACTATACACCAATGCGCTCCTACC
GGATGTCGCACATCAAACGTTTGAGGCAGAATCAGTCGTGGAGTATGCCT
ACACCACGACCAGCCTCCTAAGCTGTTCGGTGGGGGAGAAAGCTGAAAAA
ATCCCAAACACGTTCAAGGAGATGACCAACAACCACAGTGACGAAGAATG
CCGTGTCTTGCAAAGACACAACAACAACAACCAGGGAGCAAACTTTGCAC
AGTGGTCAAGCTACTCCACAGTCACCGGCACAGGGGAACAGCCTCCGGCC
ATCTCTTTCAACGCCTTGAAAACGCCGAGCACGAACAATCCCTCGGACAA
TTCCTCAAAGGCGGAGGACCTCTGGCCGTTCGCCCCCACAAGCGAACCTG
TTGCTGCTTTCGACAGCAGCGGGCTCTTCGGTGCCTTCGGAGGGGTCAAC
GGCGGGGAGACTGGGGGGCTGTCTCTCACAGTGAACGACGGGCCAGAAGA
GGGACTGGAGCTTCGGCGCCGAGCTAACAATATGCTGCAGGTGATCAGGG
AGGCAATGTCTCCACTAGCCCGTGTATTAGCGATAATGGCCGTGGTACAT
TACGTCTGGTTAATGTTCGGTAGCTCATTATACCAGCGGGCAACATCGAA
CAATAACCTCAACAGCAAGCCTGAAACATTTCGCGGCATCACCGACGTGG
ATGATGGGTCGGCCCTTGCGGCGGGACCGGCCTTTGAAAAGTGGAACGAC
GACAACAACAGTACTGTCAGCGTAATGGTGGACAGTGGGGCGTCGGGGCA
CTACTTCGACGATACCCTTATTCCCGGATTGCGGTACAAACTCTTCAACT
ACCAGGAGCTAACTGTACCGCGTAAGATCACAACCGCAGGAGGGCATCAA
TTGGCAGGGGTCGGCCAGGGACTGCTACGCGGGCACATCAACGACAGCGA
AGGGGTAAAACGTTTGGTTCAGATCTCGTGCTTGGTCGTACCTGGCTTGG
GGCGGAACTTGTTCTCCGTCAAGCAAGCGACACGAAACGGAGTTGTATCC
ATTTTCGACATGAACAACCCGAGGCTAGAAACGAACAACTTCACCGTCCC
GCTCCAGGAGCTGGAGAGCGATCTATATTTCTTCTCGCTGGAAATAACCA
GCGGTAGCGGCGCGCCTGGACTGGCAATGCAAGCTGCAGATACCGCCACA
CTTTGGCATCGGCGAATGGGACACTTGAATCGCAACAGTTTGAACCTCCT
GAAGACGGTCGATGACAACGGGGTGGACTTCGGTGGAGCCGTACCGGATT
GTGACATTTGTGCCGTTGGGAAAAGTCATCAACTGGCTCATCCGAAGACA
GCCGACAACCAAGTGCAACGCGCCTTCCAGCTAGTCATGACAGATTTGAT
GGGACCGATCATGCCGGAGGCGCTCGGGGGCTTCAAGTACGCTTGCAAAA
TTTCCGACGAGTACACGAGATGGACGGAGATTTACCTCCTGAAGACCAAG
GACGGAGCACTTCACGCATTCCAGTCATTCATACAGTCAATGGTCATTCC
CGGCGGCGTTCGGGTCGAGCGACTAAGGGCGGACAAAGGGGGTGAGTTTA
TTGGCAACGATTTTAGAAGCTACTGCCGGCAGACAGGCGTATTGCTAGAG
TTCGCAAGCACCAACACACCACAACAAATCGGTATGTCAGAACGCGTCGG
GAGGACGCTCGCAGCCATGGTCCGGTGCATGCTTGCCGACAGCGGTTTGC
CAACCTTTCTCTGGGGGGAACTGATGTTCACAGCGGCGTATCTTGCAAAC
AGAGCACCACACTCCGCGCTCGGCATGCAATCTCCTCATAAGATGCTGAA
GGGAACGGAACCGGATCTTCGACACCTTCGAGTTATCGGAGCCAGAGCTT
TCGTACATATCGAGCGGCACACCCCAAAACTCGCTCTTAAGGCAGTCGAA
GGACGGTTAGTTGGGTACAGTAATCACAGCAAGAGCTACCGGGTCTACAA
TCCGGCCACCCGACGTATCATTGAGAGCAGGAACGTCGTCTTCATCGAGA
CGCCACCACATCTTACGCCAACGGGGGAGCCACAACTTCTGATACACCCG
TCTTCACCTAGCGACAGTGAGGGCCACAATTACGCCACCGACGACGACTT
CTTACGTGATCTTCGCGATCACACCTCCGTACTAGCTCAACCAGCTCGTG
TGTCTGTCGATCATGCCACTGCCAGCGGGGTCTCTAGCAATCCACAGGTG
GCCGAGCTTCTGGAAAGGATCAGTACCATCACCCGGCGGGATATGCTGCA
CGACGATGCCACACCTCGTGAAGGGACGTCACCAGCATCACCGGAAGGCG
GCGAACCGCCGGAGAAAACTGTGGCTCCTTCACAGGACGGAGCTAGCCAG
TCCACGGAGACATCATCAACCGAACCACCGCTCAACCACCCTCACCACAC
TCATCACCAAGTGACTCCTGCGGTGACACGCGCGGGTGTCGCAGCACGCT
CCTTCAGGGAACGCAACGCCAACAACGACAGCCCAGCTTCCACGCATCTT
GCAGCAATTGCCAACGACAAAACGCTCTCCGAGCTACGACAACTGGGACT
ATACACCAATGCGCTCCTACCGGATGTCGCACATCAAACGTTTGAGGCAG
AATCAGTCGTGGAGTATGCCTACACCACGACCAGCCTCCTAAGCTGTTCG
GTGGGGGAGAAAGCTGAAAAAATCCCAAACACGTTCAAGGAG
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