prot_H-paniculata_contig21433.5642.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig21433.5642.1
Unique Nameprot_H-paniculata_contig21433.5642.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length55
Homology
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BLAST of mRNA_H-paniculata_contig21433.5642.1 vs. uniprot
Match: D7FJ51_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ51_ECTSI)

HSP 1 Score: 93.2 bits (230), Expect = 8.250e-21
Identity = 47/52 (90.38%), Postives = 51/52 (98.08%), Query Frame = 0 
Query:    1 ARVPPLLCLFLEDMVTLACAASTASTDDSELLELQEAGVMMLTEVARTFAQV 52
            A+VP LLCL+LED+VTLACAA+TASTDDSELLELQEAGVMMLTEVARTFAQV
Sbjct:  455 AQVPALLCLYLEDLVTLACAAATASTDDSELLELQEAGVMMLTEVARTFAQV 506
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BLAST of mRNA_H-paniculata_contig21433.5642.1 vs. uniprot
Match: A0A6H5K5D2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5D2_9PHAE)

HSP 1 Score: 90.5 bits (223), Expect = 7.300e-20
Identity = 46/52 (88.46%), Postives = 50/52 (96.15%), Query Frame = 0 
Query:    1 ARVPPLLCLFLEDMVTLACAASTASTDDSELLELQEAGVMMLTEVARTFAQV 52
            A+VP LLCL+LED+VTLACAA+TASTDDSELLELQEAGVMMLT VARTFAQV
Sbjct:   30 AQVPALLCLYLEDLVTLACAAATASTDDSELLELQEAGVMMLTVVARTFAQV 81
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig21433.5642.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FJ51_ECTSI8.250e-2190.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K5D2_9PHAE7.300e-2088.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 12..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..54
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..11
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..20
score: 0.698

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig21433contigH-paniculata_contig21433:3806..3970 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig21433.5642.1mRNA_H-paniculata_contig21433.5642.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig21433 3806..3970 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig21433.5642.1 ID=prot_H-paniculata_contig21433.5642.1|Name=mRNA_H-paniculata_contig21433.5642.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=55bp
ARVPPLLCLFLEDMVTLACAASTASTDDSELLELQEAGVMMLTEVARTFA
QVRK*
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