prot_H-paniculata_contig21421.5637.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig21421.5637.1
Unique Nameprot_H-paniculata_contig21421.5637.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length92
Homology
BLAST of mRNA_H-paniculata_contig21421.5637.1 vs. uniprot
Match: A0A445EEE2_ARAHY (Uncharacterized protein n=2 Tax=Arachis hypogaea TaxID=3818 RepID=A0A445EEE2_ARAHY)

HSP 1 Score: 93.2 bits (230), Expect = 3.880e-20
Identity = 42/91 (46.15%), Postives = 57/91 (62.64%), Query Frame = 0
Query:    3 SAVHCLNRAPTRLHNEGTPCEKWHGEIPKLDHLCAFGCTAYVMFQSQ-RRKLDDTAWAGVFLGYDEDSSSHRIYNPENKSVQLSRNLIFDE 92
            +AVH LNR PT+   + TP E W G+ P + H   FGC AY     Q R+KLDD     +F+GY  DS ++++YNPE K V +SR++ FDE
Sbjct:  665 TAVHILNRCPTKSVRDKTPEEAWSGKRPSIHHFRVFGCIAYAHVPDQLRKKLDDKGEKCIFIGYSTDSKAYKLYNPETKKVIISRDVTFDE 755          
BLAST of mRNA_H-paniculata_contig21421.5637.1 vs. uniprot
Match: L0P215_PHYED (PH01B019A14.9 protein n=2 Tax=Phyllostachys edulis TaxID=38705 RepID=L0P215_PHYED)

HSP 1 Score: 92.8 bits (229), Expect = 5.380e-20
Identity = 39/90 (43.33%), Postives = 60/90 (66.67%), Query Frame = 0
Query:    3 SAVHCLNRAPTRLHNEGTPCEKWHGEIPKLDHLCAFGCTAYVMFQSQRRKLDDTAWAGVFLGYDEDSSSHRIYNPENKSVQLSRNLIFDE 92
            +AVH LNR+PT+  +  TP E WHG  P + HL  FGC A+V   +   KLDD +  GVF+GY E + ++R+ +P  + V+++R+++FDE
Sbjct:  837 TAVHLLNRSPTKALDGKTPYEAWHGRKPAVSHLRVFGCLAFVKELNHVGKLDDRSTPGVFIGYTEGAKAYRVLDPTTRRVRITRDVVFDE 926          
BLAST of mRNA_H-paniculata_contig21421.5637.1 vs. uniprot
Match: UPI000DECC56D (uncharacterized protein LOC112803219 n=1 Tax=Arachis hypogaea TaxID=3818 RepID=UPI000DECC56D)

HSP 1 Score: 91.7 bits (226), Expect = 1.310e-19
Identity = 41/91 (45.05%), Postives = 57/91 (62.64%), Query Frame = 0
Query:    3 SAVHCLNRAPTRLHNEGTPCEKWHGEIPKLDHLCAFGCTAYVMFQSQ-RRKLDDTAWAGVFLGYDEDSSSHRIYNPENKSVQLSRNLIFDE 92
            +AVH LNR PT+   + TP E W G+ P + H   FGC AY     Q R+KLDD     +F+GY  DS ++++YNP+ K V +SR++ FDE
Sbjct:  493 TAVHILNRCPTKSVRDKTPEEAWSGKRPSIHHFRVFGCIAYAHVPDQLRKKLDDKGEKCIFIGYSTDSKAYKLYNPKTKKVIISRDVTFDE 583          
BLAST of mRNA_H-paniculata_contig21421.5637.1 vs. uniprot
Match: Q9AUM6_ORYSJ (Putative gag-pol polyprotein n=1 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=Q9AUM6_ORYSJ)

HSP 1 Score: 89.4 bits (220), Expect = 8.890e-19
Identity = 40/90 (44.44%), Postives = 57/90 (63.33%), Query Frame = 0
Query:    3 SAVHCLNRAPTRLHNEGTPCEKWHGEIPKLDHLCAFGCTAYVMFQSQRRKLDDTAWAGVFLGYDEDSSSHRIYNPENKSVQLSRNLIFDE 92
            +AVH LNR PT+  +  TP E WHG  P + HL  FGC A+    +   KLDD +  GVF+GY E   ++RI +P  + V++SR+++FDE
Sbjct: 1001 TAVHLLNRLPTKALDGKTPYEAWHGRKPVVSHLRVFGCLAFAKELNHVGKLDDRSSPGVFIGYAEGVKAYRILDPATQRVRISRDVVFDE 1090          
BLAST of mRNA_H-paniculata_contig21421.5637.1 vs. uniprot
Match: C7IZC8_ORYSJ (Os03g0680566 protein n=1 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=C7IZC8_ORYSJ)

HSP 1 Score: 89.4 bits (220), Expect = 8.890e-19
Identity = 40/90 (44.44%), Postives = 57/90 (63.33%), Query Frame = 0
Query:    3 SAVHCLNRAPTRLHNEGTPCEKWHGEIPKLDHLCAFGCTAYVMFQSQRRKLDDTAWAGVFLGYDEDSSSHRIYNPENKSVQLSRNLIFDE 92
            +AVH LNR PT+  +  TP E WHG  P + HL  FGC A+    +   KLDD +  GVF+GY E   ++RI +P  + V++SR+++FDE
Sbjct: 1083 TAVHLLNRLPTKALDGKTPYEAWHGRKPVVSHLRVFGCLAFAKELNHVGKLDDRSSPGVFIGYAEGVKAYRILDPATQRVRISRDVVFDE 1172          
BLAST of mRNA_H-paniculata_contig21421.5637.1 vs. uniprot
Match: Q10F54_ORYSJ (Retrotransposon protein, putative, Ty1-copia subclass n=1 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=Q10F54_ORYSJ)

HSP 1 Score: 89.4 bits (220), Expect = 8.930e-19
Identity = 40/90 (44.44%), Postives = 57/90 (63.33%), Query Frame = 0
Query:    3 SAVHCLNRAPTRLHNEGTPCEKWHGEIPKLDHLCAFGCTAYVMFQSQRRKLDDTAWAGVFLGYDEDSSSHRIYNPENKSVQLSRNLIFDE 92
            +AVH LNR PT+  +  TP E WHG  P + HL  FGC A+    +   KLDD +  GVF+GY E   ++RI +P  + V++SR+++FDE
Sbjct: 1481 TAVHLLNRLPTKALDGKTPYEAWHGRKPVVSHLRVFGCLAFAKELNHVGKLDDRSSPGVFIGYAEGVKAYRILDPATQRVRISRDVVFDE 1570          
BLAST of mRNA_H-paniculata_contig21421.5637.1 vs. uniprot
Match: Q10RM4_ORYSJ (Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=Q10RM4_ORYSJ)

HSP 1 Score: 88.6 bits (218), Expect = 1.650e-18
Identity = 40/93 (43.01%), Postives = 59/93 (63.44%), Query Frame = 0
Query:    1 MRSAVHCLNRAPTRLHNEGTPCEKWHGEIPKLDHLCAFGCTAYVM-FQSQRRKLDDTAWAGVFLGYDEDSSSHRIYNPENKSVQLSRNLIFDE 92
            +R AVH LNR PT+   + TP E W G  P+L HL  FGCTA+    Q   +KLDD +   V+LG +E S +HR+++P    + +SR+++F+E
Sbjct:  665 VRHAVHLLNRLPTKAMGDRTPFEAWTGRKPQLGHLKVFGCTAHAKNTQPHLKKLDDRSAPYVYLGVEEGSKAHRLFDPRRGRIHVSRDVVFEE 757          
BLAST of mRNA_H-paniculata_contig21421.5637.1 vs. uniprot
Match: UPI000DEC3EF5 (uncharacterized protein LOC112729595 n=2 Tax=Arachis hypogaea TaxID=3818 RepID=UPI000DEC3EF5)

HSP 1 Score: 86.7 bits (213), Expect = 7.110e-18
Identity = 39/91 (42.86%), Postives = 56/91 (61.54%), Query Frame = 0
Query:    3 SAVHCLNRAPTRLHNEGTPCEKWHGEIPKLDHLCAFGCTAYVMFQSQ-RRKLDDTAWAGVFLGYDEDSSSHRIYNPENKSVQLSRNLIFDE 92
            +AVH LNR PT+   + TP + W G+ P + H   FGC  Y     Q R+KLDD     +F+GY  DS ++++YNPE K V +S+++ FDE
Sbjct:  418 TAVHILNRCPTKSVRDKTPEKIWSGKRPFIHHFRIFGCITYAHVPDQLRKKLDDKGEKCIFIGYSTDSKAYKLYNPETKKVIISKDVTFDE 508          
BLAST of mRNA_H-paniculata_contig21421.5637.1 vs. uniprot
Match: A0A2K3JMR9_TRIPR (Cysteine-rich receptor-like protein kinase 25-like protein n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3JMR9_TRIPR)

HSP 1 Score: 82.0 bits (201), Expect = 1.540e-17
Identity = 36/90 (40.00%), Postives = 57/90 (63.33%), Query Frame = 0
Query:    4 AVHCLNRAPTRLHNEGTPCEKWHGEIPKLDHLCAFGCTAYVMF-QSQRRKLDDTAWAGVFLGYDEDSSSHRIYNPENKSVQLSRNLIFDE 92
            A + LNR+PT    + TP E W G+ P + H   FGC AY+    + R+KLDD +   + LG  E+S ++++Y+P NK V +SR+++F+E
Sbjct:   23 ATYILNRSPTLSVKDMTPQEAWSGKKPNVQHFRVFGCLAYMHVPDNHRKKLDDKSLKCILLGISEESKAYKLYDPTNKKVIISRDVVFEE 112          
BLAST of mRNA_H-paniculata_contig21421.5637.1 vs. uniprot
Match: Q60EG1_ORYSJ (Putative polyprotein n=1 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=Q60EG1_ORYSJ)

HSP 1 Score: 85.1 bits (209), Expect = 2.680e-17
Identity = 39/93 (41.94%), Postives = 58/93 (62.37%), Query Frame = 0
Query:    1 MRSAVHCLNRAPTRLHNEGTPCEKWHGEIPKLDHLCAFGCTAYVMFQSQR-RKLDDTAWAGVFLGYDEDSSSHRIYNPENKSVQLSRNLIFDE 92
            +R AV  LN  PT+   E TP E W G+ P L HL  FGCTA+    +   +KLDD +   V+LG +E S +HR+++P  + + +SR+++FDE
Sbjct:  494 VRHAVFLLNLLPTKSMGERTPFEAWTGKKPHLGHLRVFGCTAHAKVTTPNLKKLDDRSEQFVYLGIEEGSKAHRLFDPRRRRIHVSRDVVFDE 586          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig21421.5637.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A445EEE2_ARAHY3.880e-2046.15Uncharacterized protein n=2 Tax=Arachis hypogaea T... [more]
L0P215_PHYED5.380e-2043.33PH01B019A14.9 protein n=2 Tax=Phyllostachys edulis... [more]
UPI000DECC56D1.310e-1945.05uncharacterized protein LOC112803219 n=1 Tax=Arach... [more]
Q9AUM6_ORYSJ8.890e-1944.44Putative gag-pol polyprotein n=1 Tax=Oryza sativa ... [more]
C7IZC8_ORYSJ8.890e-1944.44Os03g0680566 protein n=1 Tax=Oryza sativa subsp. j... [more]
Q10F54_ORYSJ8.930e-1944.44Retrotransposon protein, putative, Ty1-copia subcl... [more]
Q10RM4_ORYSJ1.650e-1843.01Retrotransposon protein, putative, unclassified n=... [more]
UPI000DEC3EF57.110e-1842.86uncharacterized protein LOC112729595 n=2 Tax=Arach... [more]
A0A2K3JMR9_TRIPR1.540e-1740.00Cysteine-rich receptor-like protein kinase 25-like... [more]
Q60EG1_ORYSJ2.680e-1741.94Putative polyprotein n=1 Tax=Oryza sativa subsp. j... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11439:SF265coord: 2..92
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 2..92

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig21421contigH-paniculata_contig21421:3837..4112 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig21421.5637.1mRNA_H-paniculata_contig21421.5637.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig21421 3822..4112 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig21421.5637.1 ID=prot_H-paniculata_contig21421.5637.1|Name=mRNA_H-paniculata_contig21421.5637.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=92bp
MRSAVHCLNRAPTRLHNEGTPCEKWHGEIPKLDHLCAFGCTAYVMFQSQR
RKLDDTAWAGVFLGYDEDSSSHRIYNPENKSVQLSRNLIFDE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039537Retrotran_Ty1/copia-like