prot_H-paniculata_contig2139.5624.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2139.5624.1
Unique Nameprot_H-paniculata_contig2139.5624.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length595
Homology
BLAST of mRNA_H-paniculata_contig2139.5624.1 vs. uniprot
Match: D8LC54_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC54_ECTSI)

HSP 1 Score: 238 bits (607), Expect = 1.610e-66
Identity = 183/489 (37.42%), Postives = 243/489 (49.69%), Query Frame = 0
Query:   33 LLDRMLNAFLNGNTPWCLNVLSAVSSLHSPLPSAASTRTSAGDSSVPYPLPRGGTVDRKS---TLCNGAHTISDIIGGVAVAAVAPAXXXXAGRGIRARAPASN--GHYQHDDNXNDDEPITAALCLHLFRRVLQVGGAEARAIAAKVGIATAXXXXXXXXXXXXXXXXXARVGGXXXXRSNSISSEDSSGLRRVDGXXXXXWRRGRGGV-----------------GVAEVALRCGPPLTPALVVAVRLFADGYDVVVKLQANAADVEECESIDPLPLDLIRYLVSLGELLVTWVSPRGAES---GLSRRLLSSGANWSLLRAFGKML-------DFPPLPSVAAGXXXXXAWRTEDCQCRATANARAPGFMADFSLAYLHALVAVNLGGLFASAEGLTRGTLAAGIAKHIGLFELCRAMDSASDWVTFA--------------KVGGQGRCSPVPAWWALAGDATFSKELLGAIQAAQCAAVELIAR 475
            LLDR L+AFL+GNT WC +VL+ V++ H+   SAA    ++  SS P       +V R +   ++ NG     D+ GGVAV +          R   A AP S+  G  + +    +D+P+ AAL L L RRVLQ GGA+ARAIAA VG+ T                   R GG    R+   S  +S+G     G       + RGG                  G +   +RCGPPLTPAL VA+RL ADGY   V  Q    + E  E   P P DL  YL+SLGEL++TW+S   AE     LSRRLL+SG++W+LLR FG+         D PP      G                  +A       D SL+YLHA+VA+ +G   +S   L    LAAGI +++GLFE CR +DSASDW+ FA               + G+ R   VP++WALAGD+TFS  L+  IQ AQ   ++LI +
Sbjct:   96 LLDRTLDAFLSGNTEWCKSVLAGVAAKHA---SAARLEDASRSSSPPASTGNPSSVPRSNDHVSVANGTSKERDV-GGVAVMSTVAKIGLLCVRASSAAAPQSSKPGETEANGGGGEDDPLAAALRLRLLRRVLQAGGADARAIAASVGLPTGAAA--------------VRRGGE---RARESSEGESNGREEPSGVEGPIEEQQRGGXXXXXXXXXXXASDGNGEGGSGRRVRCGPPLTPALEVAMRLLADGYKCAVTRQTGVLEAEGEERRSP-PSDLTHYLISLGELVLTWLSLAPAEGVGPALSRRLLASGSSWTLLRTFGRAFRPDLARRDVPP----GNGDHIEEGHDAAAASAADATSADGRRLSDDPSLSYLHAVVAMVVGSFVSSGSNLASRALAAGIERYVGLFEFCRILDSASDWIAFAWPATAMHTPTHPGGSMAGEMR---VPSFWALAGDSTFSSRLVEIIQTAQMTMIDLIIK 555          
BLAST of mRNA_H-paniculata_contig2139.5624.1 vs. uniprot
Match: A0A6H5JC49_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC49_9PHAE)

HSP 1 Score: 148 bits (374), Expect = 1.890e-36
Identity = 100/243 (41.15%), Postives = 129/243 (53.09%), Query Frame = 0
Query:  259 RLFADGYDVVVKLQANAADVEECESIDPLPLDLIRYLVSLGELLVTWVSPRGAES---GLSRRLLSSGANWSLLRAFGKML-------DFPP--LPSVAAGXXXXXAWRTEDCQCRATANARAPGFMADFSLAYLHALVAVNLGGLFASAEGLTRGTLAAGIAKHIGLFELCRAMDSASDWVTFA--------------KVGGQGRCSPVPAWWALAGDATFSKELLGAIQAAQCAAVELIAR 475
            RL ADGY   V  Q    + E  E + P P DL  YLVSLGEL++TW+S   AE     LSRRLL+SG++W LLR FG+         D PP     +  G     A         A  +A       D SL+YLHA+VA+ +G   +S   L    LAAGI +++GLFE CR +DSASDW+ FA               V G+ R   VP++WALAGD+TFS  L+  IQ AQ   ++LI +
Sbjct:    2 RLLADGYKCAVTRQTGVLEAEGDERLSP-PSDLTHYLVSLGELVLTWLSLSPAEGVGPALSRRLLASGSSWMLLRTFGRAFRPDLARRDIPPGNAEQIEEGHNAGAA------SAAAATSADGRRLSDDPSLSYLHAVVAMVVGSFVSSGSNLASRALAAGIERYVGLFEFCRILDSASDWIAFAWPATATHTPTHPGGSVAGEMR---VPSFWALAGDSTFSSRLVKMIQTAQMTMIDLIIK 234          
BLAST of mRNA_H-paniculata_contig2139.5624.1 vs. uniprot
Match: A0A6H5JB63_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB63_9PHAE)

HSP 1 Score: 88.2 bits (217), Expect = 1.800e-14
Identity = 64/161 (39.75%), Postives = 82/161 (50.93%), Query Frame = 0
Query:   26 NREVFMMLLDRMLNAFLNGNTPWCLNVLSAVSSLHSPLPSAASTRTSAGDSSVPYPLPRGGTVDRKS-----TLCNGAHTISDIIGGVAVAAVAPAXXXXAGRGIRARAPASN--GHYQHDDNXNDDEPITAALCLHLFRRVLQVGGAEARAIAAKVGIAT 179
            N    + LLDR L+AFL GNT WC +VL+ V++ H     A++ R      SVP P   G             + NG     D+ GGVAV +          R   A AP S+  G  + D    +D+P+ AAL L L RRVLQ GGA+ARAIAA VG+ T
Sbjct:  655 NATAEVALLDRTLDAFLYGNTEWCKSVLAGVAAKH-----ASAARIGDASQSVPPPASTGNPSSASRGNDHVPVANGTSKEQDV-GGVAVMSTVAKIGLLCVRASSAGAPRSSTRGETEADGGGGEDDPLAAALRLRLLRRVLQAGGADARAIAASVGLPT 809          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2139.5624.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LC54_ECTSI1.610e-6637.42Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JC49_9PHAE1.890e-3641.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JB63_9PHAE1.800e-1439.75Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 503..523

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2139contigH-paniculata_contig2139:2079..9638 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2139.5624.1mRNA_H-paniculata_contig2139.5624.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2139 167..9773 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2139.5624.1 ID=prot_H-paniculata_contig2139.5624.1|Name=mRNA_H-paniculata_contig2139.5624.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=595bp
MEFNTEREGEEGTEEEAATEVRQEGNREVFMMLLDRMLNAFLNGNTPWCL
NVLSAVSSLHSPLPSAASTRTSAGDSSVPYPLPRGGTVDRKSTLCNGAHT
ISDIIGGVAVAAVAPAAAAVAGRGIRARAPASNGHYQHDDNNNDDEPITA
ALCLHLFRRVLQVGGAEARAIAAKVGIATAGATAAAAAAAAAAGTGNARV
GGGKSSRSNSISSEDSSGLRRVDGGGGGGWRRGRGGVGVAEVALRCGPPL
TPALVVAVRLFADGYDVVVKLQANAADVEECESIDPLPLDLIRYLVSLGE
LLVTWVSPRGAESGLSRRLLSSGANWSLLRAFGKMLDFPPLPSVAAGAGA
GAAWRTEDCQCRATANARAPGFMADFSLAYLHALVAVNLGGLFASAEGLT
RGTLAAGIAKHIGLFELCRAMDSASDWVTFAKVGGQGRCSPVPAWWALAG
DATFSKELLGAIQAAQCAAVELIARRGGNEDDETRKNSSSSSNNNSSNND
VEIESGKKLLRRQQLRIEELEKRLLEGGGGGGIGEIGIVKEAEQLSISRK
AKEHSNFQGVKEENNPRGGVEMGNGGSSNFSGERPSQQQWRITI*
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