prot_H-paniculata_contig10872.561.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig10872.561.1
Unique Nameprot_H-paniculata_contig10872.561.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length293
Homology
BLAST of mRNA_H-paniculata_contig10872.561.1 vs. uniprot
Match: A0A6H5JKP4_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKP4_9PHAE)

HSP 1 Score: 165 bits (418), Expect = 4.110e-45
Identity = 126/322 (39.13%), Postives = 165/322 (51.24%), Query Frame = 0
Query:    5 KTLIAHIIGKGGLTVRRISRESKTAIVIRPRNNGDG-DVVITGKPKDVSVAKH------------------LVEELYREK---------GVNPDRMPXXXXXXXXXXXXXXXXXXXXXSTFHTTQGAGRARLGDPAPAGADAMINRLAQGKPPXXXXXXXXXXXXXXXXXXXXXXXXPALAGSKVVAVAGAWGGEMRALLKRAGCEKHLAMFQREMVDMEVLTMMRDKDFHKMGLNEGEMIRILNALKSP-------ADEDSDDGLDPDDPHTCKICLDAIVEIMFVPCGHQVTCERCGSSYDHKPCIICRVMITRVVKVYK 291
            + +   +IGK G TV ++ +ES+  IV++P  +  G DVVITG P  V V+K                   L   LY +          G     +                        F+ ++G     L  P+ A A A     A+ +P      XXXXXXXXXXXX              VV   GAWGGE+R LL+ AGCE HL  F+ + +D EVL MM  +DF +MG+  GE IRILNALK         +DEDSD GLDPD P TCKICLDA+V+I+F+PC H  TC RCGS+Y+ KPCI+CR ++ +V +V K
Sbjct:   51 QNIAPQLIGKQGQTVSKLMKESRAKIVVKPYPDRSGNDVVITGTPNAVKVSKSRVLGSTLDCCRGCVRVRCLAIPLYFQAVVVGRCDGVGAGCFVVVVNALSLRHPLQCTRRVTMRVEEEFYRSKGCQPTALPPPSSAVAAARKAEGARARPAQPVTGXXXXXXXXXXXX--------------VVVEDGAWGGELRQLLRVAGCEHHLERFREDQLDGEVLLMMDRRDFERMGVTVGEQIRILNALKGSGAGGVDDSDEDSD-GLDPDHPDTCKICLDALVDILFLPCAHHCTCSRCGSAYEGKPCILCRRVVDKVQRVIK 357          
BLAST of mRNA_H-paniculata_contig10872.561.1 vs. uniprot
Match: D7FX21_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX21_ECTSI)

HSP 1 Score: 159 bits (403), Expect = 2.290e-40
Identity = 77/137 (56.20%), Postives = 96/137 (70.07%), Query Frame = 0
Query:  161 VVAVAGAWGGEMRALLKRAGCEKHLAMFQREMVDMEVLTMMRDKDFHKMGLNEGEMIRILNALKSPADED------SDDGLDPDDPHTCKICLDAIVEIMFVPCGHQVTCERCGSSYDHKPCIICRVMITRVVKVYK 291
            VV   GAWGGE+R LL+ AGCE HL  F+ + +D EVL MM  +DF +MG+ EGE IRILNALK              DGLDPD P TCKICLDA+V+I+F+PC HQ TC RCGS+Y+ KPCI+CR ++ +V +V K
Sbjct:  879 VVVEDGAWGGELRQLLRVAGCEHHLERFREDQLDGEVLLMMDRRDFERMGVTEGEQIRILNALKGSGGXXXXXXXXDSDGLDPDHPDTCKICLDALVDILFLPCAHQCTCSRCGSAYEGKPCILCRRVVDKVQRVIK 1015          
BLAST of mRNA_H-paniculata_contig10872.561.1 vs. uniprot
Match: A0A6H5J8V2_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8V2_9PHAE)

HSP 1 Score: 90.5 bits (223), Expect = 1.430e-16
Identity = 41/65 (63.08%), Postives = 48/65 (73.85%), Query Frame = 0
Query:  228 DEDSD-DGLDPDDPHTCKICLDAIVEIMFVPCGHQVTCERCGSSYDHKPCIICRVMITRVVKVYK 291
            DED D DGLDPD P TCKIC+DA+V I+F+PC HQ TC RCGS +  KPCIICR  +TR   V +
Sbjct: 1007 DEDXDSDGLDPDHPDTCKICMDALVGILFLPCAHQCTCVRCGSGFVGKPCIICRQKVTRAQPVIR 1071          
BLAST of mRNA_H-paniculata_contig10872.561.1 vs. uniprot
Match: A0A0D2WTC9_CAPO3 (Uncharacterized protein n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2WTC9_CAPO3)

HSP 1 Score: 67.4 bits (163), Expect = 6.140e-9
Identity = 26/56 (46.43%), Postives = 38/56 (67.86%), Query Frame = 0
Query:  239 DPHTCKICLDAIVEIMFVPCGHQVTCE--RCGSSYDHKPCIICRVMITRVVKVYKS 292
            D  TC +C+DA ++  FVPCGH V C+   C SS   KPC +CR ++T++ ++YKS
Sbjct:  471 DQETCIVCMDAAIQFAFVPCGHYVCCDINGCASSLVDKPCPLCRALVTKIQRIYKS 526          
BLAST of mRNA_H-paniculata_contig10872.561.1 vs. uniprot
Match: A0A1A8J025_NOTKU (Baculoviral IAP repeat-containing 7 (Fragment) n=1 Tax=Nothobranchius kuhntae TaxID=321403 RepID=A0A1A8J025_NOTKU)

HSP 1 Score: 61.2 bits (147), Expect = 7.940e-9
Identity = 25/51 (49.02%), Postives = 34/51 (66.67%), Query Frame = 0
Query:  242 TCKICLDAIVEIMFVPCGHQVTCERCGSSYDHKPCIICRVMITRVVKVYKS 292
            TCK+C+D +V I+F+PCGH V CE C +S  H  C ICR +I   V+ + S
Sbjct:   18 TCKVCMDKLVSIVFIPCGHLVVCEDCAASLRH--CPICRAVIRGSVRAFMS 66          
BLAST of mRNA_H-paniculata_contig10872.561.1 vs. uniprot
Match: A0A816TRX1_9BILA (Hypothetical protein n=6 Tax=Rotaria TaxID=231623 RepID=A0A816TRX1_9BILA)

HSP 1 Score: 63.9 bits (154), Expect = 6.320e-8
Identity = 29/54 (53.70%), Postives = 36/54 (66.67%), Query Frame = 0
Query:  239 DPHTCKICLDAIVEIMFVPCGHQVTCERCGSSYDHKPCIICRVMITRVVKVYKS 292
            D   CKIC+DAIV+ +F+ CGH VTC +CG       C ICR  I RVV+V+KS
Sbjct:  310 DSELCKICMDAIVDCVFLDCGHMVTCVKCGKLLAE--CPICRSNIVRVVRVFKS 361          
BLAST of mRNA_H-paniculata_contig10872.561.1 vs. uniprot
Match: A0A817ETY9_9BILA (Hypothetical protein n=4 Tax=Rotaria sp. Silwood2 TaxID=2762512 RepID=A0A817ETY9_9BILA)

HSP 1 Score: 63.9 bits (154), Expect = 6.840e-8
Identity = 29/54 (53.70%), Postives = 36/54 (66.67%), Query Frame = 0
Query:  239 DPHTCKICLDAIVEIMFVPCGHQVTCERCGSSYDHKPCIICRVMITRVVKVYKS 292
            D   CKIC+DAIV+ +F+ CGH VTC +CG       C ICR  I RVV+V+KS
Sbjct:  335 DSELCKICMDAIVDCVFLDCGHMVTCVKCGKLLAE--CPICRSNIVRVVRVFKS 386          
BLAST of mRNA_H-paniculata_contig10872.561.1 vs. uniprot
Match: A0A818HTJ4_9BILA (Hypothetical protein n=4 Tax=Rotaria sp. Silwood1 TaxID=2762511 RepID=A0A818HTJ4_9BILA)

HSP 1 Score: 63.9 bits (154), Expect = 6.970e-8
Identity = 29/54 (53.70%), Postives = 36/54 (66.67%), Query Frame = 0
Query:  239 DPHTCKICLDAIVEIMFVPCGHQVTCERCGSSYDHKPCIICRVMITRVVKVYKS 292
            D   CKIC+DAIV+ +F+ CGH VTC +CG       C ICR  I RVV+V+KS
Sbjct:  342 DSELCKICMDAIVDCVFLDCGHMVTCVKCGKLLAE--CPICRSNIVRVVRVFKS 393          
BLAST of mRNA_H-paniculata_contig10872.561.1 vs. uniprot
Match: A0A814IF12_9BILA (Hypothetical protein n=3 Tax=Rotaria sordida TaxID=392033 RepID=A0A814IF12_9BILA)

HSP 1 Score: 63.9 bits (154), Expect = 7.040e-8
Identity = 29/54 (53.70%), Postives = 36/54 (66.67%), Query Frame = 0
Query:  239 DPHTCKICLDAIVEIMFVPCGHQVTCERCGSSYDHKPCIICRVMITRVVKVYKS 292
            D   CKIC+DAIV+ +F+ CGH VTC +CG       C ICR  I RVV+V+KS
Sbjct:  346 DSELCKICMDAIVDCVFLDCGHMVTCVKCGKLLAE--CPICRSNIVRVVRVFKS 397          
BLAST of mRNA_H-paniculata_contig10872.561.1 vs. uniprot
Match: A0A3Q3KPZ8_MONAL (RING-type domain-containing protein n=1 Tax=Monopterus albus TaxID=43700 RepID=A0A3Q3KPZ8_MONAL)

HSP 1 Score: 61.2 bits (147), Expect = 3.600e-7
Identity = 30/74 (40.54%), Postives = 43/74 (58.11%), Query Frame = 0
Query:  219 ILNALKSPADEDSDDGLDPDDPHTCKICLDAIVEIMFVPCGHQVTCERCGSSYDHKPCIICRVMITRVVKVYKS 292
            +  A+K P+ ED    L  +   TCK+C+D +V I+F+PCGH V C  C +S  H  C ICR +I   V+ + S
Sbjct:  222 VSAAVKDPSPEDLLRQLQEE--RTCKVCMDKLVSIVFIPCGHLVVCGDCAASLRH--CPICRAVIRGSVRTFMS 291          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig10872.561.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JKP4_9PHAE4.110e-4539.13RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D7FX21_ECTSI2.290e-4056.20Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J8V2_9PHAE1.430e-1663.08RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A0D2WTC9_CAPO36.140e-946.43Uncharacterized protein n=1 Tax=Capsaspora owczarz... [more]
A0A1A8J025_NOTKU7.940e-949.02Baculoviral IAP repeat-containing 7 (Fragment) n=1... [more]
A0A816TRX1_9BILA6.320e-853.70Hypothetical protein n=6 Tax=Rotaria TaxID=231623 ... [more]
A0A817ETY9_9BILA6.840e-853.70Hypothetical protein n=4 Tax=Rotaria sp. Silwood2 ... [more]
A0A818HTJ4_9BILA6.970e-853.70Hypothetical protein n=4 Tax=Rotaria sp. Silwood1 ... [more]
A0A814IF12_9BILA7.040e-853.70Hypothetical protein n=3 Tax=Rotaria sordida TaxID... [more]
A0A3Q3KPZ8_MONAL3.600e-740.54RING-type domain-containing protein n=1 Tax=Monopt... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004087K Homology domainSMARTSM00322kh_6coord: 1..63
e-value: 1.4E-8
score: 44.5
IPR036612K Homology domain, type 1 superfamilyGENE3D3.30.1370.10coord: 1..69
e-value: 1.1E-12
score: 49.3
IPR036612K Homology domain, type 1 superfamilySUPERFAMILY54791Eukaryotic type KH-domain (KH-domain type I)coord: 1..75
IPR004088K Homology domain, type 1PFAMPF00013KH_1coord: 1..60
e-value: 1.9E-11
score: 43.6
NoneNo IPR availablePFAMPF13920zf-C3HC4_3coord: 241..286
e-value: 6.6E-11
score: 41.9
NoneNo IPR availablePANTHERPTHR12183UNCHARACTERIZED RING ZINC FINGER-CONTAINING PROTEINcoord: 228..291
NoneNo IPR availablePROSITEPS50084KH_TYPE_1coord: 1..58
score: 13.816
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 239..287
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 229..291
e-value: 4.5E-14
score: 53.7
IPR013761Sterile alpha motif/pointed domain superfamilyGENE3D1.10.150.50coord: 171..228
e-value: 1.6E-10
score: 42.6
IPR013761Sterile alpha motif/pointed domain superfamilySUPERFAMILY47769SAM/Pointed domaincoord: 174..224
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 243..280
score: 10.026

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig10872contigH-paniculata_contig10872:3147..7652 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig10872.561.1mRNA_H-paniculata_contig10872.561.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig10872 2265..8279 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig10872.561.1 ID=prot_H-paniculata_contig10872.561.1|Name=mRNA_H-paniculata_contig10872.561.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=293bp
MYCPKTLIAHIIGKGGLTVRRISRESKTAIVIRPRNNGDGDVVITGKPKD
VSVAKHLVEELYREKGVNPDRMPPPGGAATPAASAAAHAAAATTSTFHTT
QGAGRARLGDPAPAGADAMINRLAQGKPPAAATTATAAAPGGGGGKRMVA
AAAPALAGSKVVAVAGAWGGEMRALLKRAGCEKHLAMFQREMVDMEVLTM
MRDKDFHKMGLNEGEMIRILNALKSPADEDSDDGLDPDDPHTCKICLDAI
VEIMFVPCGHQVTCERCGSSYDHKPCIICRVMITRVVKVYKS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004087KH_dom
IPR036612KH_dom_type_1_sf
IPR004088KH_dom_type_1
IPR013083Znf_RING/FYVE/PHD
IPR013761SAM/pointed_sf
IPR001841Znf_RING