prot_H-paniculata_contig21309.5597.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig21309.5597.1
Unique Nameprot_H-paniculata_contig21309.5597.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length74
Homology
BLAST of mRNA_H-paniculata_contig21309.5597.1 vs. uniprot
Match: D7G4Z5_ECTSI (Dynein light chain n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4Z5_ECTSI)

HSP 1 Score: 150 bits (379), Expect = 6.020e-46
Identity = 71/73 (97.26%), Postives = 73/73 (100.00%), Query Frame = 0
Query:    1 MRVDAQNWAAAAIETKSDEKEISRAIKAKFEVKYGPTWHCIVGTDFKAFVTHESKHFVFFYHGKMAFCLYKAG 73
            MRVDAQNWAAAAIE+KSDEKEISRAIK+KFEVKYGPTWHCIVGTDFKAFVTHESKHFVFFYHGKMAFCLYKAG
Sbjct:   20 MRVDAQNWAAAAIESKSDEKEISRAIKSKFEVKYGPTWHCIVGTDFKAFVTHESKHFVFFYHGKMAFCLYKAG 92          
BLAST of mRNA_H-paniculata_contig21309.5597.1 vs. uniprot
Match: A0A835YST4_9STRA (Dynein light chain n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YST4_9STRA)

HSP 1 Score: 117 bits (294), Expect = 5.560e-33
Identity = 54/73 (73.97%), Postives = 63/73 (86.30%), Query Frame = 0
Query:    1 MRVDAQNWAAAAIETKSDEKEISRAIKAKFEVKYGPTWHCIVGTDFKAFVTHESKHFVFFYHGKMAFCLYKAG 73
            MR DAQ WAAAAIE+ ++EK IS+ IK + + KYGPTWHCIVGTDFKA+VTHE+K F+FFYHGKMA CLYKAG
Sbjct:   20 MRTDAQAWAAAAIESHAEEKAISKDIKGRMDDKYGPTWHCIVGTDFKAYVTHETKTFMFFYHGKMAICLYKAG 92          
BLAST of mRNA_H-paniculata_contig21309.5597.1 vs. uniprot
Match: A0A7S2V5R3_9STRA (Dynein light chain (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5R3_9STRA)

HSP 1 Score: 115 bits (288), Expect = 1.430e-31
Identity = 54/73 (73.97%), Postives = 63/73 (86.30%), Query Frame = 0
Query:    1 MRVDAQNWAAAAIETKSDEKEISRAIKAKFEVKYGPTWHCIVGTDFKAFVTHESKHFVFFYHGKMAFCLYKAG 73
            M+ DA+N AAAA+E   +EK+ISR IKA F+ KYGPTWHCIVGTDF+AFVTHESKHF+FFY GK+A CLYKAG
Sbjct:   59 MKNDAKNVAAAAVEQHQEEKDISRHIKAHFDQKYGPTWHCIVGTDFRAFVTHESKHFIFFYIGKIAICLYKAG 131          
BLAST of mRNA_H-paniculata_contig21309.5597.1 vs. uniprot
Match: A0A482SJR4_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SJR4_9ARCH)

HSP 1 Score: 104 bits (260), Expect = 4.830e-28
Identity = 48/72 (66.67%), Postives = 59/72 (81.94%), Query Frame = 0
Query:    1 MRVDAQNWAAAAIETKSDEKEISRAIKAKFEVKYGPTWHCIVGTDFKAFVTHESKHFVFFYHGKMAFCLYKA 72
            M+ DA    AAA+ET ++EK+IS+ +K  F+ KYGPTWHCIVG+DF+AFVTHESKHF+FFY GK A CLYKA
Sbjct:    1 MKHDAFTVVAAALETNTEEKDISKHVKTYFDQKYGPTWHCIVGSDFRAFVTHESKHFIFFYIGKTAICLYKA 72          
BLAST of mRNA_H-paniculata_contig21309.5597.1 vs. uniprot
Match: A0A7S2CIH5_9STRA (Dynein light chain n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CIH5_9STRA)

HSP 1 Score: 104 bits (260), Expect = 1.680e-27
Identity = 49/73 (67.12%), Postives = 58/73 (79.45%), Query Frame = 0
Query:    1 MRVDAQNWAAAAIETKSDEKEISRAIKAKFEVKYGPTWHCIVGTDFKAFVTHESKHFVFFYHGKMAFCLYKAG 73
            M+ DA   A  AIE  ++EK IS +IK+ F+ KYGPTWHCIVG+DF+AFVTHESKHF+FFY GK A CLYKAG
Sbjct:   44 MKADAHTVAGEAIEKFTEEKAISTSIKSFFDAKYGPTWHCIVGSDFRAFVTHESKHFIFFYIGKTAICLYKAG 116          
BLAST of mRNA_H-paniculata_contig21309.5597.1 vs. uniprot
Match: A0A7S0SUZ6_9STRA (Dynein light chain n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SUZ6_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 1.040e-25
Identity = 46/72 (63.89%), Postives = 58/72 (80.56%), Query Frame = 0
Query:    1 MRVDAQNWAAAAIETKSDEKEISRAIKAKFEVKYGPTWHCIVGTDFKAFVTHESKHFVFFYHGKMAFCLYKA 72
            M+ DA + A+ A+E   +EK+ISR IK+ F+ KYGPTWHCIVG+DF+AFVT+ESKHF+FFY GK A CLYK 
Sbjct:   30 MKNDALSVASTALEANQEEKDISRHIKSFFDQKYGPTWHCIVGSDFRAFVTYESKHFIFFYIGKTAICLYKT 101          
BLAST of mRNA_H-paniculata_contig21309.5597.1 vs. uniprot
Match: F0XW00_AURAN (Dynein light chain (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XW00_AURAN)

HSP 1 Score: 99.0 bits (245), Expect = 1.100e-25
Identity = 46/73 (63.01%), Postives = 56/73 (76.71%), Query Frame = 0
Query:    1 MRVDAQNWAAAAIETKSDEKEISRAIKAKFEVKYGPTWHCIVGTDFKAFVTHESKHFVFFYHGKMAFCLYKAG 73
            M+ +  N AA AIE    E E+S+ IKA F+ KYGPTWHCIVG+DF+A+VTHESK+F+FFY GK A CLYK G
Sbjct:    6 MKQEVYNLAAYAIEQYVTEMEVSKHIKAHFDQKYGPTWHCIVGSDFRAYVTHESKNFIFFYQGKTAICLYKCG 78          
BLAST of mRNA_H-paniculata_contig21309.5597.1 vs. uniprot
Match: A0A8J2SHI5_9STRA ([Phosphatase 2A protein]-leucine-carboxy methyltransferase n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SHI5_9STRA)

HSP 1 Score: 96.7 bits (239), Expect = 4.340e-22
Identity = 46/73 (63.01%), Postives = 55/73 (75.34%), Query Frame = 0
Query:    1 MRVDAQNWAAAAIETKSDEKEISRAIKAKFEVKYGPTWHCIVGTDFKAFVTHESKHFVFFYHGKMAFCLYKAG 73
            M+ +A N AA A+E    E EIS+ IKA+F+ KYGPTWHCIVG+DFK   THE+KHF+FFYHGK A  LYK G
Sbjct:  306 MKQEAYNLAAYAVEQFVTEMEISKHIKAQFDEKYGPTWHCIVGSDFKLQCTHEAKHFIFFYHGKTAVALYKCG 378          
BLAST of mRNA_H-paniculata_contig21309.5597.1 vs. uniprot
Match: A0A0R3UCN8_MESCO (Dynein light chain n=1 Tax=Mesocestoides corti TaxID=53468 RepID=A0A0R3UCN8_MESCO)

HSP 1 Score: 89.4 bits (220), Expect = 1.380e-21
Identity = 40/73 (54.79%), Postives = 59/73 (80.82%), Query Frame = 0
Query:    1 MRVDAQNWAAAAIETKSDEKEISRAIKAKFEVKYGPTWHCIVGTDFKAFVTHESKHFVFFYHGKMAFCLYKAG 73
            M+ DA + A+ A++ ++ EK+I+ AIK KF+ KYGPTWHCIVG +F ++VTHESKHF++FY G++A  L+K+G
Sbjct:   30 MQHDAVDCASEAMQNQTIEKDIAAAIKKKFDSKYGPTWHCIVGRNFGSYVTHESKHFIYFYMGQVAILLFKSG 102          
BLAST of mRNA_H-paniculata_contig21309.5597.1 vs. uniprot
Match: G4VB75_SCHMA (Dynein light chain n=7 Tax=Schistosoma TaxID=6181 RepID=G4VB75_SCHMA)

HSP 1 Score: 84.3 bits (207), Expect = 9.440e-20
Identity = 39/73 (53.42%), Postives = 55/73 (75.34%), Query Frame = 0
Query:    1 MRVDAQNWAAAAIETKSDEKEISRAIKAKFEVKYGPTWHCIVGTDFKAFVTHESKHFVFFYHGKMAFCLYKAG 73
            M+ DA + AA A+E  S EK+I+  IK +F+ KY PTWHCIVG +F ++VTHE+KHF++FY G +A  L+K+G
Sbjct:   18 MQQDAVDCAAQALEKYSVEKDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYMGNVAILLFKSG 90          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig21309.5597.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G4Z5_ECTSI6.020e-4697.26Dynein light chain n=2 Tax=Ectocarpus TaxID=2879 R... [more]
A0A835YST4_9STRA5.560e-3373.97Dynein light chain n=1 Tax=Tribonema minus TaxID=3... [more]
A0A7S2V5R3_9STRA1.430e-3173.97Dynein light chain (Fragment) n=1 Tax=Fibrocapsa j... [more]
A0A482SJR4_9ARCH4.830e-2866.67Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A7S2CIH5_9STRA1.680e-2767.12Dynein light chain n=1 Tax=Florenciella parvula Ta... [more]
A0A7S0SUZ6_9STRA1.040e-2563.89Dynein light chain n=1 Tax=Chromulina nebulosa Tax... [more]
F0XW00_AURAN1.100e-2563.01Dynein light chain (Fragment) n=1 Tax=Aureococcus ... [more]
A0A8J2SHI5_9STRA4.340e-2263.01[Phosphatase 2A protein]-leucine-carboxy methyltra... [more]
A0A0R3UCN8_MESCO1.380e-2154.79Dynein light chain n=1 Tax=Mesocestoides corti Tax... [more]
G4VB75_SCHMA9.440e-2053.42Dynein light chain n=7 Tax=Schistosoma TaxID=6181 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001372Dynein light chain, type 1/2SMARTSM01375Dynein_light_2coord: 1..72
e-value: 2.0E-23
score: 93.8
IPR001372Dynein light chain, type 1/2PFAMPF01221Dynein_lightcoord: 1..71
e-value: 2.6E-25
score: 88.5
IPR001372Dynein light chain, type 1/2PANTHERPTHR11886DYNEIN LIGHT CHAINcoord: 1..73
IPR037177Dynein light chain superfamilyGENE3D3.30.740.10coord: 1..73
e-value: 1.1E-25
score: 91.5
IPR037177Dynein light chain superfamilySUPERFAMILY54648DLCcoord: 1..72
NoneNo IPR availablePANTHERPTHR11886:SF35DYNEIN LIGHT CHAIN 2, CYTOPLASMICcoord: 1..73

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig21309contigH-paniculata_contig21309:1695..2681 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig21309.5597.1mRNA_H-paniculata_contig21309.5597.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig21309 1695..2699 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig21309.5597.1 ID=prot_H-paniculata_contig21309.5597.1|Name=mRNA_H-paniculata_contig21309.5597.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=74bp
MRVDAQNWAAAAIETKSDEKEISRAIKAKFEVKYGPTWHCIVGTDFKAFV
THESKHFVFFYHGKMAFCLYKAG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001372Dynein_light_chain_typ-1/2
IPR037177DLC_sf