mRNA_H-paniculata_contig21305.5596.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig21305.5596.1 vs. uniprot
Match: W7T174_9STRA (Gag-pol polyprotein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T174_9STRA) HSP 1 Score: 301 bits (771), Expect = 7.990e-87 Identity = 236/726 (32.51%), Postives = 347/726 (47.80%), Query Frame = 1
Query: 1 VCSACEKGKASKKPVKKNREERTTEPLELMHTDITGPVD-KSFGGCRFAIVFVEDYSKRSKVYTLRPKSDALWALKQFERDVA---RANGVRIKR-LRSDQGGEYTGKPFRQFCTENDIK*EFSAAYTSQQSIVAERSWRNIFEMARANMITAKMGRGYCAEAVRSAVYCLNRAPTRPQNGG-TPYEK*HR*IPKLDHLRVFGCMSYDMFQSQQRCKLDDKACAGVFLGYD---KDSPSYRIYNPENKSVQLSRNVRFDEEDF----------VTGHHGQQEHE--GTRNIGDFFNTLVTPAHGSITNT--EDRTSASQMPPILPTPSLPATSANLFSVLSDDGDD----ENN------------------GDSTM---------------------------------KDAEPAVEDAPSAGTAAPASRGDITKQSGTEAQRPRDRSPIRTRQ-------GFSEVEDEEFFEISAPVARMSTLHTVFSLAAAHGFELEDTDVDAAYLNARVEEELIIELP---PEFSPSSGDIPFVRRMRKCLYGLKQSGRNWNNNLDDVLVGIGLRHSTTDSCLYFSRDGRGETNVLVAAYVDDLVIADR-REKVDKFKHNISERFRMKDLGSLSRVLGIEVRRDHPNSTITISQGSYIREVLK------CTPAKPKPLGAVLSYIGAGIQESSRGRSGNSTEYRGMVGSLVYASTGIRPDIAYAVHQAARRME 1893
VC CE+ K +KK ER EPLEL+HTD+ GPV+ +S GG R+AI F +DY++ VY ++ KS++L LK++ +D+ R + V R LRSD GGEYTG F+ FC + I+ +F Y Q + +AE+SW + MARA I A +G+G+ AEA+ +A Y NR+ G TPY K ++H R FGC ++ S +R K DD+A G+ +GYD + YRIY P S +V FDEE F V +H ++E + + +G + P+ S + E+R+ ++P + + + + D DD NN G +TM KDA+ P +G+ SG RD++ + R+ G+S+ ++ + APVA M+T+ V +LA EL++ DVD AYL + +EE++ I+ P ++ P+ G++ V R+RK LYGLKQSGRNW+ +D G G S+ D CLY GE V+V YVDDL+IA R DKFK IS F MKDL L +LG+ ++R+ + ISQ YI +L C P G + G ++ S EY +VGSL+YA+ RPDIA+AV + ++
Sbjct: 102 VCGTCERAKQTKKSFGTKSRERAKEPLELVHTDVLGPVEVESLGGARYAIGFTDDYTRWRVVYPMKHKSESLDCLKRYIQDMNISFRDHKVNTLRGLRSDNGGEYTGVDFKNFCKNHGIRQDFGMPYGPQDNGLAEKSWHILCNMARALRIQAGLGKGFWAEALNTATYIWNRSRNSTLGAGETPYYKMFGKHASVNHFRTFGCKAFVHDTSVRRGKFDDRAVEGILIGYDDIGNNPKCYRIYIPSLGRYIRSGHVTFDEETFPARVRPSNIRVETYHNEEEDDKNSMKTVGAHQEDELLPSGRSEDDDGIENRSHQDEIPNDREVDHVREYPSQVGATGWKDTDDIIRNMNNMGRTRSRTKARERRRLDDGSTTMGGNLAFAAASEIVNEDYHLTEDEKEVRAERKKAKDAKYQAHMKNGTWELTPLPKGERCISSGWVETDKRDQNGVIVRRKARFIAKGYSQEYGYDYLQTYAPVASMTTIRLVLALACILDLELDNMDVDTAYLQSDLEEKVYIKQPHGYEKYGPNGGEL--VCRLRKSLYGLKQSGRNWHKKIDGWFRGYGFHPSSADPCLYVKFGSSGEMLVVVL-YVDDLIIASNSRTMADKFKQAISREFSMKDLKELDWILGMAIKRNREKRIMEISQTGYIDMMLNKFGMTDCKPVLTPMEGTLTKMDGKDVKPDS--------EYMKLVGSLLYAALVTRPDIAFAVQSLGKHLQ 816
BLAST of mRNA_H-paniculata_contig21305.5596.1 vs. uniprot
Match: A0A6A2WSU7_HIBSY (Integrase catalytic domain-containing protein n=2 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2WSU7_HIBSY) HSP 1 Score: 301 bits (771), Expect = 8.900e-86 Identity = 223/686 (32.51%), Postives = 343/686 (50.00%), Query Frame = 1
Query: 1 VCSACEKGKASKKPVKKNREERTTEPLELMHTDITGPVD-KSFGGCRFAIVFVEDYSKRSKVYTLRPKSDALWALKQFERDVARANGVRIKRLRSDQGGEYTGKPFRQFCTENDIK*EFSAAYTSQQSIVAERSWRNIFEMARANMITAKMGRGYCAEAVRSAVYCLNRAPTRPQNGGTPYEK*HR*IPKLDHLRVFGCMSYDMFQSQQRCKLDDKACAGVFLGYDKDSPSYRIYNPENKSVQLSRNVRFDEEDFVTGHHGQQEHEGTRNIGDFFNTLVTPAHGSITNTEDRTSASQMPPILPTPSLPATSANLFSVLSDD--------------------GDDENNGDST---MKDAEP-----AVEDAPSAGTAAPASRGDITKQSGTEAQR-PRDRSPIRTR----------------------QGFSEVEDEEFFEISAPVARMSTLHTVFSLAAAHGFELEDTDVDAAYLNARVEEELIIELPPEFSPSSGDIPFVRRMRKCLYGLKQSGRNWNNNLDDVLVGIGLRHSTTDSCLYFSRDGRGETNVLVAAYVDDLVIADRREKV-DKFKHNISERFRMKDLGSLSRVLGIEVRRDHPNSTITISQGSYIREVLKCTPAKPKPLGAVLSYIGAGIQESSRGRSGNSTEYRGMVGSLVYASTGIRPDIAYAVHQAARRMEDP 1899
+C AC KGK ++ K R R LE++HTDI GP D S GG R+ + F++D+S++ +Y L+ KS+AL LK+F+ + +G +K LRSD+GGEYT K F +FC E+ I + +A YT QQ+ VAER R I +MAR+ + ++ R + AEAVR AVY LNR PT+ TP E P + H ++FGC++Y R KLDD+ +F+GYD+ S +YR+YNP K + +SR+V FDE D+ +++ EG FF G + N +++ A P PS ++S++ +++ D D E N S + +++P AVED A I + E R P +PI + +G+ + + ++ E+ APVAR+ T+ + ++A G+++ DV +A+LN +EEE+ IE PP + G V R++K LYGLKQ+ R WN +D+ G S + LY ++ G+ ++V YVDD++ + + FK +++ F M D+G +S LG+EV++ IT I + KP A + G + +S N T ++ +VGSL Y T RPDI YAV +R ME P
Sbjct: 364 LCEACIKGKQHRQSFKVGRSGRAQRLLEIVHTDIAGPFDIPSLGGNRYYLTFIDDFSRKCWIYILKEKSEALEKLKEFKAMAEKQSGQYLKILRSDRGGEYTSKLFEEFCKEHGIIHQLTARYTPQQNGVAERKNRTILDMARSMIKGKQLPRNFWAEAVRCAVYLLNRCPTKSVKYMTPNEAWSGQKPGVGHFKIFGCIAYAHVPEHTRKKLDDRGEKCIFIGYDERSKAYRLYNPLTKKIIISRDVEFDEADYWRWSEEEKKVEGL-----FFE----DKDGDLINQDEQ--ADDQDPRQNLPSSSSSSSDASNIIEDPEAPPTELQRSTRERRMPERYNDYELNNVSLFCLLVNSDPITYEEAVED-DKWRNAMDEEIASIERNDTWELTRQPEGHNPIGVKWVYKTKINKEGNVEKYKARLVVKGYKQRQGIDYDEVFAPVARIETIRLLTAVATQKGWKIYQMDVKSAFLNGYLEEEVYIEQPPGYI-RKGHEDKVYRLKKALYGLKQAPRAWNTRIDEYFQRNGFMKSPYEHALYTKKNEDGDI-MIVCLYVDDMIFTGNNPGMFNDFKKAMTKEFEMTDIGEMSYFLGVEVKQMQEGIFITKKYAEEILRKFRMEDCKPV---ATPAEPGVKLSVNSTREQVNPTLFKSIVGSLRYL-TITRPDITYAVGLVSRFMEHP 1031
BLAST of mRNA_H-paniculata_contig21305.5596.1 vs. uniprot
Match: A0A068B703_GOSBA (Polyprotein n=5 Tax=Gossypium TaxID=3633 RepID=A0A068B703_GOSBA) HSP 1 Score: 302 bits (773), Expect = 1.390e-85 Identity = 223/682 (32.70%), Postives = 341/682 (50.00%), Query Frame = 1
Query: 1 VCSACEKGKASKKPVKKNREERTTEPLELMHTDITGPVD-KSFGGCRFAIVFVEDYSKRSKVYTLRPKSDALWALKQFERDVARANGVRIKRLRSDQGGEYTGKPFRQFCTENDIK*EFSAAYTSQQSIVAERSWRNIFEMARANMITAKMGRGYCAEAVRSAVYCLNRAPTRPQNGGTPYEK*HR*IPKLDHLRVFGCMSYDMFQSQQRCKLDDKACAGVFLGYDKDSPSYRIYNPENKSVQLSRNVRFDEEDFVTGHHGQQEHEGT-----------------RNIGDFFNTLVTPAHGSITNTEDRTSASQMPPILPTPSLPATSANLFSVLSD------DGDDENNGDSTMKDAEPAVEDAPSAGTAAPASRGDITKQSGTEAQRPRDRSPIRTR----------------------QGFSEVEDEEFFEISAPVARMSTLHTVFSLAAAHGFELEDTDVDAAYLNARVEEELIIELPPEFSPSSGDIPFVRRMRKCLYGLKQSGRNWNNNLDDVLVGIGLRHSTTDSCLYFSRDGRGETNVLVAAYVDDLVIADRREKV-DKFKHNISERFRMKDLGSLSRVLGIEVRRDHPNSTITISQGSYIREVLKCTPAKPKPLGAVLSYIGAGIQES--SRGRSGNSTEYRGMVGSLVYASTGIRPDIAYAVHQAARRMEDP 1899
+C AC KGK ++ + + R PLE++HTDI+GP D +S GG R+ + F++DYS++ VY L+ KS+AL K+F+ V + +G +K LRSD+GGEYT K + FC ++ I + +A T QQ+ VAER R I +MAR+ + + R + AEAV AVY LN+ PT+ TP E P++ HL++FGC++Y QQR KLDD+ +F+GYDK S +YR+YNP K + +SR+V FDE D+ +++ EG S+ RT + P +LF ++++ + ENN D E A R D + + P SPI + +G+ + + ++ EI APVAR+ T+ + ++AA + +++ DV +A+LN +EEE+ IE PP +S G V R++K LYGLKQ+ R WN +D+ G S + LY ++G G+ ++V YVDD++ + D FK +++ F M D+G +S LG+EV++ I +SQ Y ++L K K V++ G++ S S S N T ++ +VGSL Y T RPDI YAV +R ME P
Sbjct: 518 LCEACVKGKQHRQKFEVGKSRRARRPLEIVHTDISGPYDIESLGGNRYYLTFIDDYSRKCWVYFLKAKSEALEKFKEFKAMVEKQSGRYLKILRSDRGGEYTAKLYESFCKDHGIIHQLTARRTPQQNGVAERKNRTILDMARSMIKGKHLPRTFWAEAVECAVYLLNQCPTKSVRHKTPEEAWSGHKPRVGHLKIFGCIAYAHVPEQQRKKLDDRGEKCIFIGYDKRSKAYRLYNPLTKKLIISRDVEFDEADYWRWSEEEKKVEGLFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSSLDEAPTRTRSLNDIYNSTEPVETQFDYSLFCLMTECDPVTYEEAIENNKWKKAMDEEIAA-----------IRRNDTWELTSL----PEGHSPIGVKWVYKTKTNKEGKVEKYKARLVAKGYKQRQGVDYDEIFAPVARIDTIRLLIAVAAQYKWKIYQMDVKSAFLNGYLEEEVYIEQPPGYS-IQGKEDKVYRLKKSLYGLKQAPRAWNTRIDEYFRRNGFIKSPHEHTLYTKKNGYGDI-MIVCLYVDDMIFTGNNPGMSDDFKKAMTKEFEMTDIGEMSYFLGVEVKQMQDG--IFVSQKKYAEQILN--KFKMKDCKPVVTPADPGMKLSVDSTRESINPTLFKSLVGSLRYL-TITRPDITYAVGLVSRFMEKP 1177
BLAST of mRNA_H-paniculata_contig21305.5596.1 vs. uniprot
Match: UPI001F004464 (DDE-type integrase/transposase/recombinase n=1 Tax=Corynebacterium parakroppenstedtii TaxID=2828363 RepID=UPI001F004464) HSP 1 Score: 293 bits (749), Expect = 8.300e-84 Identity = 224/681 (32.89%), Postives = 348/681 (51.10%), Query Frame = 1
Query: 1 VCSACEKGKASKKPVKKNREERTTEPLELMHTDITGPVD-KSFGGCRFAIVFVEDYSKRSKVYTLRPKSDALWALKQFERDVARANGVRIKRLRSDQGGEYTGKPFRQFCTENDIK*EFSAAYTSQQSIVAERSWRNIFEMARANMITAKMGRGYCAEAVRSAVYCLNRAPTRPQNGGTPYEK*HR*IPKLDHLRVFGCMSYDMFQSQQRCKLDDKACAGVFLGYDKDSPSYRIYNPENKSVQLSRNVRFDEEDFVTGHHGQQEHEGTRNIGDFFNTLVTPAHGSITNTEDRTSASQMPPILPT---PSLPATSANLFSV-----LSDDGDDENNGDST-----MKDAEPAV-EDAPSAG---------------------TAAPASRGDI--------TKQSGTEAQRPRDRSPIRTRQGFSEVEDEEFFEISAPVARMSTLHTVFSLAAAHGFELEDTDVDAAYLNARVEEELIIELPPEFSPSSGDIPFVRRMRKCLYGLKQSGRNWNNNLDDVLVGIGLRHSTTDSCLYFS-RDGRGETNVLVAAYVDDLVIADRREK-VDKFKHNISERFRMKDLGSLSRVLGIEVRRDHPNSTITISQGSYIREVLKCTPAKPKPLGAVLSYIGAGIQESSRGRSG--NSTEYRGMVGSLVYASTGIRPDIAYAVHQAARRMEDP 1899
+C C GK +K K R +PLEL+HTDI GP+ S G + ++F++D+S+++ VY L+ KS+A K+F+ V + +G+ IK +RSD+GGE+T + F+ FC ++ I+ + + QQ+ VAER R I +MAR+ + + + + + AEAV AVY LNR+PTR G TP E P + HLRVFG +Y + R KLDDK+ A +F+GYD +S Y++YNP+ ++ +SR+V FDEE G HE DF + + T T +D P PT + P + N SV L D +D ++ D EP E+A + T+ P I K S E +R + R + G+S+ ++ E+ APVAR+ T+ + SLAA + +++ DV +A+LN ++EE+ I+ P + + V R++K LYGLKQ+ R WN+ +D L G + LY +DG ++V YVDDL+ A ++ +D+FK ++++ F M D+G ++ LGIEV++ I ISQ Y +E++K K V + + GI+ S ++T ++ +VGSL Y T RPDI YA +R ME+P
Sbjct: 149 LCEGCLLGKQFRKSFPKKSSSRAQKPLELIHTDICGPIKPSSLGKSNYFLLFIDDFSRKTWVYFLKQKSEAFEVFKKFKAAVEKESGLHIKAMRSDRGGEFTSREFQNFCEKHGIRRPLTVPRSPQQNGVAERKNRTILDMARSMLKSKNLPKEFWAEAVACAVYLLNRSPTRSVWGKTPQESWSGRKPGISHLRVFGSKAYAHVPDETRSKLDDKSKAFIFIGYDSNSKGYKLYNPDTNNLVISRDVEFDEE----GEWDFSSHE------DFNSIMPTEEEEQPTAEQDVQQEPTTPLTSPTVVQDASPPSFLNERSVERARSLGDIYEDTERLENLTLLCLFADCEPVTFEEAVQSKKWRDAMDEEIKSIEKNDTWELTSLPKGHKAIGVKWVYKAKKNSKGEIERYKARLVAK---GYSQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGVLDEEVYIQQPMGYKVKMQEDK-VLRLKKALYGLKQAPRAWNSRIDKYLQENGFAKCPHEHALYTKMKDG---DILIVCLYVDDLIFAGNNQRMIDEFKQSMAKVFEMTDIGLMAYYLGIEVKQLEDG--IFISQEGYAKEIIK--KFKMDDCNPVNTPVECGIKLSKHDEDEKVDTTMFKSLVGSLRYL-TCTRPDILYATGLISRYMENP 807
BLAST of mRNA_H-paniculata_contig21305.5596.1 vs. uniprot
Match: C0JJI2_SOYBN (Copia-type polyprotein n=3 Tax=Glycine subgen. Soja TaxID=1462606 RepID=C0JJI2_SOYBN) HSP 1 Score: 293 bits (749), Expect = 1.550e-83 Identity = 224/677 (33.09%), Postives = 335/677 (49.48%), Query Frame = 1
Query: 1 VCSACEKGKASKKPVKKNREERTTEPLELMHTDITGPVDK-SFGGCRFAIVFVEDYSKRSKVYTLRPKSDALWALKQFERDVARANGVRIKRLRSDQGGEYTGKPFRQFCTENDIK*EFSAAYTSQQSIVAERSWRNIFEMARANMITAKMGRGYCAEAVRSAVYCLNRAPTRPQNGGTPYEK*HR*IPKLDHLRVFGCMSYDMFQSQQRCKLDDKACAGVFLGYDKDSPSYRIYNPENKSVQLSRNVRFDEEDFVTGHHGQQEHEGTRNIGDFFNTL---------VTPAHGSITNTEDRTSASQ---------MPPILPTPSLPATSANLFSVLSDDGDDENNGDSTMKDAE--PAVEDAPSA------GTAAPASRGD----------ITKQSGTEAQRPRDRSPIRTRQGFSEVEDEEFFEISAPVARMSTLHTVFSLAAAHGFELEDTDVDAAYLNARVEEELIIELPPEFSPSSGDIPFVRRMRKCLYGLKQSGRNWNNNLDDVLVGIGLRHSTTDSCLYFSRDGRGETNVLVAAYVDDLVIADRREKV-DKFKHNISERFRMKDLGSLSRVLGIEVRRDHPNSTITISQGSYIREVLK------CTPAKPKPLGAVLSYIGAGIQESSRGRSGNSTEYRGMVGSLVYASTGIRPDIAYAVHQAARRMEDP 1899
+C AC GK +++ K R EPL+L++TD+ GP++ S G ++ ++F++DYS+++ VY L+ KS+A A K F+ V + +G IK LRSD+GGE+T K F +FC + I+ + + QQ+ VAER R I M R + M + + AEAV AVY NR+PT+ TP E P++DHLRVFG ++Y Q R KLDD++ VF+GYD S Y++YNP N +SR+V F EE G +E E T + +F + TPA +T + +S+S+ M I +LF + D N D MKD A+E+ A + +G I K + E +R + R + G+ + + ++ E+ APVARM T+ + SLAA + + DV +A+LN +EE++ +E P F G V ++ K LYGLKQ+ R WN ++D G H + LY G+ + + YVDDL+ + + FK ++S F M D+G +S LG+EV++ + I +SQ Y +EVLK C P G G + + G +ST ++ +VGSL Y T RPDI YAV R ME P
Sbjct: 192 LCEACLLGKHARRSFPKEANSRAKEPLQLVYTDVCGPINPPSCGNNKYFLLFIDDYSRKTWVYFLKQKSEAFVAFKNFKALVEKESGYVIKALRSDRGGEFTSKEFNEFCEKYGIRRPLTVPRSPQQNGVAERKNRTILNMTRCMLKAKNMPKEFWAEAVACAVYLSNRSPTKNVKDQTPQEAWSGVKPRVDHLRVFGSIAYAHVPDQGRFKLDDRSEKHVFIGYDASSKGYKLYNPNNGKTIVSRDVEFYEE----GTWNWEEKEDTYDFFPYFEEIDEEALTPNDSTPALSPTPSTNEASSSSEGSSSERPRRMRNIQELYDETEVINDLFCLFVDSKP--LNFDEAMKDKRWRQAMEEEIKAIEKNNTWELSSLPKGHEAIGVKWVFKIKKNAKGEVERHKARLVAK---GYKQQYEVDYDEVFAPVARMETIRLLISLAAQMKWRIFQFDVKSAFLNGYLEEDVYVEQPMGFV-IEGQEGKVLKLNKALYGLKQAPRAWNTHIDKYFQDNGFVHCQNEYALYVKTFNNGDV-LFICLYVDDLIFTGNNPNLFEDFKESMSREFDMTDMGLMSYYLGMEVKQTQ--NGIFVSQERYTKEVLKKFNMLDCNPVNTPMEG------GLKLSKFDEGEKVDSTIFKSLVGSLRYL-TNTRPDILYAVGVVCRFMEAP 848
BLAST of mRNA_H-paniculata_contig21305.5596.1 vs. uniprot
Match: A0A4Y1QWW3_PRUDU (Transposable element protein n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A4Y1QWW3_PRUDU) HSP 1 Score: 290 bits (741), Expect = 2.730e-83 Identity = 218/671 (32.49%), Postives = 332/671 (49.48%), Query Frame = 1
Query: 1 VCSACEKGKASKKPVKKNREERTTEPLELMHTDITGPV-DKSFGGCRFAIVFVEDYSKRSKVYTLRPKSDALWALKQFERDVARANGVRIKRLRSDQGGEYTGKPFRQFCTENDIK*EFSAAYTSQQSIVAERSWRNIFEMARANMITAKMGRGYCAEAVRSAVYCLNRAPTRPQNGGTPYEK*HR*IPKLDHLRVFGCMSYDMFQSQQRCKLDDKACAGVFLGYDKDSPSYRIYNPENKSVQLSRNVRFDE--------EDFVTGHHGQQEHEGTRNIGDFFNTLVTPAHGSITNTEDRTSASQMPPILPTPSLPATSANLFSVLSDDGDDENNGDSTMKDAEPA-VEDAPSAGTAAPASRGDIT--KQSGTE--AQRPRDRSPIRTR----------------------QGFSEVEDEEFFEISAPVARMSTLHTVFSLAAAHGFELEDTDVDAAYLNARVEEELIIELPPEFSPSSGDIPFVRRMRKCLYGLKQSGRNWNNNLDDVLVGIGLRHSTTDSCLYFSRDGRGETNVLVAAYVDDLVIADRREKV-DKFKHNISERFRMKDLGSLSRVLGIEVRRDHPNSTITISQGSYIREVLK-CTPAKPKPLGAVLSYIGAGIQESSRGRSGNSTEYRGMVGSLVYASTGIRPDIAYAVHQAARRMEDP 1899
+C C GK + P ++ R PLEL+H DI GP SF R+ I+FV+D+S+ VY L KS+A KQF+ +G +K LR+D+GGE+T F ++C N IK E +A YT QQ+ VAER R I EMAR+ + + + AEA+ +AV+ LNR+PT+ TP+E HR PK+D ++FGC +Y SQ+R K D+K +F+GY S +YR+ +P KS+ +SR+V FDE D ++ F + + A + ++ D T P L A + +L + + D + EP E+A A +I K++ T RP+ + I + +G+S+ +F E APV RM T+ TV +LAA ++ DV +A+LN +EEE+ +E P + G V R+RK LYGLKQ+ R WNN +D G S ++ LY ++G + +L YVDDL+ ++ + FK N+ + + M DLG++ LGI+V++ + I ISQG Y +LK K KP+ ++ I + + +++ Y+ +VGSL+Y T RPDI +AV +R M DP
Sbjct: 158 ICEGCIFGKFHRLPFSQSSW-RAKAPLELVHADICGPTRTPSFNNKRYFILFVDDFSRMMWVYFLEQKSEAFSVFKQFKAFGENQSGHNLKVLRTDRGGEFTSNEFSEYCKSNGIKRELTARYTPQQNGVAERRNRTIVEMARSMLKAKSLPNTFWAEAIHTAVFILNRSPTKAVKDKTPFEAWHRFKPKVDFFKIFGCTAYAHIPSQKREKFDEKGEKYIFVGYSDQSKAYRLIDPRTKSLVISRDVIFDELKAWKWENYDIEVPRFFEEPDSSHSEETQFLQSPIPSAGTADPSSPDST-----------PRLNARTRSLADIYE-------SCDLALSALEPQKFEEAVKENIWQDAMDEEIRVIKKNRTWELVDRPKSKDIIGLKWVYKTKFNEDGSIQKHKARLVAKGYSQQPGIDFNETFAPVVRMETIRTVLALAAQLKTKVYQLDVKSAFLNGELEEEVYVEQPQGYV-EKGREDKVYRLRKALYGLKQAPRAWNNKIDHYFQQNGFTRSLSEPSLYLKKEGTHDFLIL-CLYVDDLIYTSTNPRMAEVFKKNMMKEYEMTDLGTMRYFLGIQVQQS--DEGIFISQGKYAENLLKKFNMLKSKPMDTPMA-INLKLTSNDGAPKFDASIYKSVVGSLIYL-TNTRPDIVHAVSVVSRFMSDP 803
BLAST of mRNA_H-paniculata_contig21305.5596.1 vs. uniprot
Match: A0A6A2XLF1_HIBSY (Protein indeterminate-domain 1 n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2XLF1_HIBSY) HSP 1 Score: 296 bits (758), Expect = 3.000e-83 Identity = 216/659 (32.78%), Postives = 340/659 (51.59%), Query Frame = 1
Query: 1 VCSACEKGKASKKPVKKNREERTTEPLELMHTDITGPVD-KSFGGCRFAIVFVEDYSKRSKVYTLRPKSDALWALKQFERDVARANGVRIKRLRSDQGGEYTGKPFRQFCTENDIK*EFSAAYTSQQSIVAERSWRNIFEMARANMITAKMGRGYCAEAVRSAVYCLNRAPTRPQNGGTPYEK*HR*IPKLDHLRVFGCMSYDMFQSQQRCKLDDKACAGVFLGYDKDSPSYRIYNPENKSVQLSRNVRFDEEDFVTGHHGQQEHEGTRNIGDFFNTLVTPAHGSITNTEDRTSASQMPPILPTPSLPAT----------------------SANLFSVLSDDGDDENNGDSTMKDAEPAVEDAPSAGTAAPASRGDITKQSGT-EAQRPRDRSPIRTRQGFSEVEDEEFFEISAPVARMSTLHTVFSLAAAHGFELEDTDVDAAYLNARVEEELIIELPPEFSPSSGDIPFVRRMRKCLYGLKQSGRNWNNNLDDVLVGIGLRHSTTDSCLYFSRDGRGETNVLVAAYVDDLVIADRREKV-DKFKHNISERFRMKDLGSLSRVLGIEVRRDHPNSTITISQGSYIREVLKCTPAKP-KPLGAVLSYIGAGIQESSRGRSGNSTEYRGMVGSLVYASTGIRPDIAYAVHQAARRMEDP 1899
+C C GK +K K E R +PLEL+HTD+ GP+ S G + ++F++D+S+++ VY L+ KS+ K+F+ V R +G +IK +RSD+GGE+T K F++FC N I+ + + QQ+ VAER R I +MAR+ + + K+ + + AEAV AVY NR+PTR G TP E P + HLR FG +++ ++R KLDDK+ + +F+GYD +S Y++YNP+NK +SR++ F+EE G+ + + +FF+ ++ SQ P SL +T + +L + D DE + K+ + P A TKQ+ E +R + R + G+S+ ++ E+ APVAR+ T+ + SLAA + ++++ DV A+LN +EEEL I+ P + G V +++K LYGLKQ+ R WN+ +D G + LY + E ++V YVDDL+ + ++FK + + F M D+G ++ LGIEV++ N I ISQ SY +E+LK + KP+ Y G + + G S + T ++ +VGSL Y T RPDI +AV +R ME P
Sbjct: 508 LCEGCLVGKQFRKSFPKESETRAKKPLELIHTDVCGPIKPSSLGNNNYFLLFIDDFSRKTWVYFLKQKSEVFEVFKKFKAAVERESGRKIKAMRSDRGGEFTSKEFQEFCEANGIRRPMTVPRSPQQNGVAERKNRTILDMARSMLKSKKLPKEFWAEAVSCAVYLSNRSPTRSVWGKTPQEACSGRKPGISHLRTFGSIAHVHVPDERRTKLDDKSESFIFIGYDANSKGYKLYNPDNKKFVISRDLVFNEE-------GEWDFNSHTDDFNFFSQFEEDEQ----TMREQLDESQQELATPPTSLTSTXXXXXXXXXXXXGSQSERVVQRTRSLRDLYERDAMDEEI-KAIEKNDTWELTSLPKGHKAIGVKWVYKTKQNAKGEIERHKARLVAK---GYSQKAGIDYDEVFAPVARLETIRLIISLAAQNKWKIQQMDVKFAFLNGVLEEELYIQQPSGYEVK-GHEDKVLKLKKALYGLKQAPRAWNSRIDKYFQENGFNKCPYEHALYIKI--KDEDILIVCLYVDDLIFTGSNPSMFNEFKDVMMKEFEMTDMGLMAYYLGIEVKQQ--NDGIFISQESYAKEILKKFKMENCKPISTPAEY-GIKMTKHEEGESVDPTFFKSLVGSLRYL-TCTRPDILHAVGLVSRYMESP 1144
BLAST of mRNA_H-paniculata_contig21305.5596.1 vs. uniprot
Match: A0A151T355_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Cajanus cajan TaxID=3821 RepID=A0A151T355_CAJCA) HSP 1 Score: 293 bits (750), Expect = 9.400e-83 Identity = 207/660 (31.36%), Postives = 333/660 (50.45%), Query Frame = 1
Query: 1 VCSACEKGKASKKPVKKNREERTTEPLELMHTDITGPVDK-SFGGCRFAIVFVEDYSKRSKVYTLRPKSDALWALKQFERDVARANGVRIKRLRSDQGGEYTGKPFRQFCTENDIK*EFSAAYTSQQSIVAERSWRNIFEMARANMITAKMGRGYCAEAVRSAVYCLNRAPTRPQNGGTPYEK*HR*IPKLDHLRVFGCMSYDMFQSQQRCKLDDKACAGVFLGYDKDSPSYRIYNPENKSVQLSRNVRFDEEDFVTGHHGQQEHEGTRNIGDFFNTLVTPAHGSITNTEDRTSASQMPPILPTPSLPATSANLFSVLSDDGDDENNGDSTMKDAEPAVEDAPSAGTAAPASRGDITKQSGTE--AQRPRDRSPI------RTR----------------QGFSEVEDEEFFEISAPVARMSTLHTVFSLAAAHGFELEDTDVDAAYLNARVEEELIIELPPEFSPSSGDIPFVRRMRKCLYGLKQSGRNWNNNLDDVLVGIGLRHSTTDSCLYFSRDGRGETNVLVAAYVDD-LVIADRREKVDKFKHNISERFRMKDLGSLSRVLGIEVRRDHPNSTITISQGSYIREVLK-CTPAKPKPLGAVLSYIGAGIQESSRGRSGNSTEYRGMVGSLVYASTGIRPDIAYAVHQAARRMEDP 1899
+C C+ GK K P K R TE L+L+HTD+ GP+ S G ++ ++F++DY++ S V+ L+ KSD +F+ V G+++KRLRSD G EYT F++FC + I+ + + YT QQ+ V+ER R + EMAR + + + + AEAV ++VY LN PT+ G TP+E H P ++HL+VFGC+ Y + +R KLD K+ G+FLGY S YRIYNP K + +SRNV+FDE + E R + + N +++ S S+ L P + + E + ++ E A A ++ +++ T RP ++ I RT+ +G+ + +F + APVAR T+ + +LAA G+++ DV +A+LN +EE++ ++ P F + V ++ K LYGLKQ+ R W +D+ L+ G S ++ LY R + E ++++ YVDD LVI + + +FKH++ F M DLG ++ LG+E+ + ++ I ISQ Y+ E+LK K KP+ L I + + +++ YR ++GSL+Y S RPDI +A +R M P
Sbjct: 429 LCDVCQYGKQRKLPFPKEASWRATEKLQLVHTDVCGPMSTTSLNGSKYFLLFIDDYTRMSWVFFLKKKSDVFANFLKFKFMVENETGLQVKRLRSDNGTEYTAGEFKKFCEQVGIQHQLTVPYTPQQNGVSERKNRTVMEMARCLLFEKGLPKTFWAEAVNTSVYLLNLLPTKALKGNTPFEAWHGRTPSVEHLKVFGCVCYALVPEVKRDKLDQKSEVGIFLGYSSYSKGYRIYNPATKKILVSRNVKFDELSRWNWEKSKAEASNKRQL-------------EVDNLQEQNSESEEQN-LDDDDFPVRGTRDLAEIY-----ERCNVAALEPKEYAEAAELEGWRVAMQEEMNMIEKNNTWQLVDRPINQKVIGLKWVYRTKLNYDGSVNKLKARLVVKGYHQQYGVDFLDTFAPVARHDTIRMLVALAAKFGWKIYHFDVKSAFLNGFLEEDIYVDQPEGFQVKGSENK-VYKLHKALYGLKQAPRAWYTRIDNYLLQKGFERSENEATLYVKRS-QNEVKLIISLYVDDMLVIGSDFDSLRQFKHDMENEFEMSDLGQMNYFLGMEIYQC--DAGIFISQRKYVLEILKKFHMEKCKPVDTPL-VINEKLSLNDAIAKVDASLYRSLIGSLLYLSA-TRPDIMFAASLLSRFMHSP 1063
BLAST of mRNA_H-paniculata_contig21305.5596.1 vs. uniprot
Match: A0A4Y1R9H3_PRUDU (Transposable element protein (Fragment) n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A4Y1R9H3_PRUDU) HSP 1 Score: 290 bits (741), Expect = 1.320e-81 Identity = 218/671 (32.49%), Postives = 332/671 (49.48%), Query Frame = 1
Query: 1 VCSACEKGKASKKPVKKNREERTTEPLELMHTDITGPV-DKSFGGCRFAIVFVEDYSKRSKVYTLRPKSDALWALKQFERDVARANGVRIKRLRSDQGGEYTGKPFRQFCTENDIK*EFSAAYTSQQSIVAERSWRNIFEMARANMITAKMGRGYCAEAVRSAVYCLNRAPTRPQNGGTPYEK*HR*IPKLDHLRVFGCMSYDMFQSQQRCKLDDKACAGVFLGYDKDSPSYRIYNPENKSVQLSRNVRFDE--------EDFVTGHHGQQEHEGTRNIGDFFNTLVTPAHGSITNTEDRTSASQMPPILPTPSLPATSANLFSVLSDDGDDENNGDSTMKDAEPA-VEDAPSAGTAAPASRGDIT--KQSGTE--AQRPRDRSPIRTR----------------------QGFSEVEDEEFFEISAPVARMSTLHTVFSLAAAHGFELEDTDVDAAYLNARVEEELIIELPPEFSPSSGDIPFVRRMRKCLYGLKQSGRNWNNNLDDVLVGIGLRHSTTDSCLYFSRDGRGETNVLVAAYVDDLVIADRREKV-DKFKHNISERFRMKDLGSLSRVLGIEVRRDHPNSTITISQGSYIREVLK-CTPAKPKPLGAVLSYIGAGIQESSRGRSGNSTEYRGMVGSLVYASTGIRPDIAYAVHQAARRMEDP 1899
+C C GK + P ++ R PLEL+H DI GP SF R+ I+FV+D+S+ VY L KS+A KQF+ +G +K LR+D+GGE+T F ++C N IK E +A YT QQ+ VAER R I EMAR+ + + + AEA+ +AV+ LNR+PT+ TP+E HR PK+D ++FGC +Y SQ+R K D+K +F+GY S +YR+ +P KS+ +SR+V FDE D ++ F + + A + ++ D T P L A + +L + + D + EP E+A A +I K++ T RP+ + I + +G+S+ +F E APV RM T+ TV +LAA ++ DV +A+LN +EEE+ +E P + G V R+RK LYGLKQ+ R WNN +D G S ++ LY ++G + +L YVDDL+ ++ + FK N+ + + M DLG++ LGI+V++ + I ISQG Y +LK K KP+ ++ I + + +++ Y+ +VGSL+Y T RPDI +AV +R M DP
Sbjct: 395 ICEGCIFGKFHRLPFSQSSW-RAKAPLELVHADICGPTRTPSFNNKRYFILFVDDFSRMMWVYFLEQKSEAFSVFKQFKAFGENQSGHNLKVLRTDRGGEFTSNEFSEYCKSNGIKRELTARYTPQQNGVAERRNRTIVEMARSMLKAKSLPNTFWAEAIHTAVFILNRSPTKAVKDKTPFEAWHRFKPKVDFFKIFGCTAYAHIPSQKREKFDEKGEKYIFVGYSDQSKAYRLIDPRTKSLVISRDVIFDELKAWKWENYDIEVPRFFEEPDSSHSEETQFLQSPIPSAGTADPSSPDST-----------PRLNARTRSLADIYE-------SCDLALSALEPQKFEEAVKENIWQDAMDEEIRVIKKNRTWELVDRPKSKDIIGLKWVYKTKFNEDGSIQKHKARLVAKGYSQQPGIDFNETFAPVVRMETIRTVLALAAQLKTKVYQLDVKSAFLNGELEEEVYVEQPQGYV-EKGREDKVYRLRKALYGLKQAPRAWNNKIDHYFQQNGFTRSLSEPSLYLKKEGTHDFLIL-CLYVDDLIYTSTNPRMAEVFKKNMMKEYEMTDLGTMRYFLGIQVQQS--DEGIFISQGKYAENLLKKFNMLKSKPMDTPMA-INLKLTSNDGAPKFDASIYKSVVGSLIYL-TNTRPDIVHAVSVVSRFMSDP 1040
BLAST of mRNA_H-paniculata_contig21305.5596.1 vs. uniprot
Match: A0A2I0X5W4_9ASPA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Dendrobium catenatum TaxID=906689 RepID=A0A2I0X5W4_9ASPA) HSP 1 Score: 288 bits (736), Expect = 1.890e-81 Identity = 207/643 (32.19%), Postives = 318/643 (49.46%), Query Frame = 1
Query: 1 VCSACEKGKASKKPVKKNREERTTEPLELMHTDITGPVD-KSFGGCRFAIVFVEDYSKRSKVYTLRPKSDALWALKQFERDVARANGVRIKRLRSDQGGEYTGKPFRQFCTENDIK*EFSAAYTSQQSIVAERSWRNIFEMARANMITAKMGRGYCAEAVRSAVYCLNRAPTRPQNGGTPYEK*HR*IPKLDHLRVFGCMSYDMFQSQQRCKLDDKACAGVFLGYDKDSPSYRIYNPENKSVQLSRNVRFDEEDFVTGHHGQQEHEGTRNIGDFFNTLVTPAHGSITNTEDRTSASQMPPILPTPSLPATSANLFSVLSDDGDDENNGDSTMKDAEPAVEDAPSAGTAAPASRGDITKQSGTEAQRPRDRSPIR-TRQGFSEVEDEEFFEISAPVARMSTLHTVFSLAAAHGFELEDTDVDAAYLNARVEEELIIELPPEFSPSSGDIPFVRRMRKCLYGLKQSGRNWNNNLDDVLVGIGLRHSTTDSCLYFSRDGRGETNVLVAAYVDDLVIADRREK-VDKFKHNISERFRMKDLGSLSRVLGIEVRRDHPNSTITISQGSYIREVLK------CTPAK-PKPLGAVLSYIGAGIQESSRGRSGNSTEYRGMVGSLVYASTGIRPDIAYAVHQAARRMEDP 1899
+C C GK ++ +K E R + LEL+HTDI GP+ +SF G R+ I F++DYS+++ VY L+ KS+ K+F+ V + G I+ LRSD+GGEY F FC + ++ + Y+ QQ+ VAER R I +M R+ + + +M + + AEAV+ ++Y NR P TP E P + HL++FG ++Y QQR KL+DK+ VF+GYD+ + Y++ +P NK V LSR+VR +E ++ +E E N A + +R ++ LP S P +F + ++G+I DR R +G+ + ++ E+ APV RM T+ + S AA + + DV +A+LN +EEE+ +E PP + G+ V ++RK LYGLKQ+ R WN +D G + LY + +G + VA YVDDL+ K ++ FK + + F M DLG + LG+EVR+ S I +SQ +Y +++LK C P P LGA S G + ++T+YR +VGSL Y T RPDI+Y+V +R ME+P
Sbjct: 405 LCEDCIFGKHARNSFQKKAEYRASSILELVHTDICGPITPESFSGKRYFITFIDDYSRKTWVYFLKEKSETFNVFKKFKAMVEKTTGKFIRALRSDRGGEYNSAEFTSFCEQQGVRRFLTTPYSPQQNGVAERKNRTILDMVRSMLKSKEMPKEFWAEAVQCSIYIQNRCPHMKLEDKTPQEAWSGKKPTVSHLKIFGSVAYAHVPDQQRTKLEDKSKKYVFIGYDEQTKGYKLLDPINKKVVLSRDVRVNEARKWDWNNSSEEQENISFEEAVKNEKWKEAMDEEIKSIERNKTWELAE-LPKGSRPIGVKWVFKKKMN-------------------------------AQGEI------------DRYKARLVAKGYIQKAGIDYDEVFAPVTRMETIRLLISYAAQFEWPIYQMDVKSAFLNGVIEEEIYLEQPPGYK-KIGEEQKVLKLRKALYGLKQAPRAWNTRIDIYFKKNGFTQCPYEHALYVKK--KGGNLLFVALYVDDLLFMGNNGKMIENFKCEMEQEFEMTDLGLMKYFLGLEVRQG--KSGIFVSQEAYSKDILKKNKMENCNPVTTPMELGAKFSRFDGGDRV-------DATKYRSLVGSLRYL-TSTRPDISYSVGVVSRFMEEP 990 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig21305.5596.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig21305.5596.1 >prot_H-paniculata_contig21305.5596.1 ID=prot_H-paniculata_contig21305.5596.1|Name=mRNA_H-paniculata_contig21305.5596.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=435bp MSYDMFQSQQRCKLDDKACAGVFLGYDKDSPSYRIYNPENKSVQLSRNVRback to top mRNA from alignment at H-paniculata_contig21305:20..2022- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig21305.5596.1 ID=mRNA_H-paniculata_contig21305.5596.1|Name=mRNA_H-paniculata_contig21305.5596.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2003bp|location=Sequence derived from alignment at H-paniculata_contig21305:20..2022- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig21305:20..2022- >mRNA_H-paniculata_contig21305.5596.1 ID=mRNA_H-paniculata_contig21305.5596.1|Name=mRNA_H-paniculata_contig21305.5596.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2610bp|location=Sequence derived from alignment at H-paniculata_contig21305:20..2022- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |