prot_H-paniculata_contig21295.5588.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig21295.5588.1
Unique Nameprot_H-paniculata_contig21295.5588.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length71
Homology
BLAST of mRNA_H-paniculata_contig21295.5588.1 vs. uniprot
Match: A0A836CAV3_9STRA (Leo1-like protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAV3_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 7.950e-19
Identity = 39/76 (51.32%), Postives = 53/76 (69.74%), Query Frame = 0
Query:    1 EADEFKYTTNIVR----------WRHKRDNRGRLELGHDGRPIRESNARVVKWSDGSMQLLVGDEAFDIGEHSIDR 66
            E + FK+TTNI+R          WRH++D  G LE    G PIRE+N R+VKWSDGS+QL+VG+E FD+ EH++D+
Sbjct:  129 EDETFKFTTNIIRQAYFNSLTLEWRHRKDASGALEYDEHGEPIRETNTRLVKWSDGSLQLMVGEEVFDVSEHALDK 204          
BLAST of mRNA_H-paniculata_contig21295.5588.1 vs. uniprot
Match: D7FUQ9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUQ9_ECTSI)

HSP 1 Score: 70.9 bits (172), Expect = 8.250e-13
Identity = 32/42 (76.19%), Postives = 36/42 (85.71%), Query Frame = 0
Query:    1 EADEFKYTTNIVRWRHKRDNRGRLELGHDGRPIRESNARVVK 42
            EADEFK+TTNI+RWRHKR N GR ELG DGR +RESN R+VK
Sbjct:   97 EADEFKFTTNIIRWRHKRGNLGRPELGDDGRALRESNTRLVK 138          
BLAST of mRNA_H-paniculata_contig21295.5588.1 vs. uniprot
Match: A0A7S1FRB7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FRB7_9STRA)

HSP 1 Score: 67.8 bits (164), Expect = 1.690e-12
Identity = 32/56 (57.14%), Postives = 38/56 (67.86%), Query Frame = 0
Query:    1 EADEFKYTTNIVRWRHKRDNRGRLELGHDGRPIRESNARVVKWSDGSMQLLVGDEA 56
            E   FK+  NI+RW   RDNRG +     GRP+R SNAR+VKWSDGS  L+VG EA
Sbjct:   70 EERRFKFPHNIIRWGFVRDNRGGIARDPSGRPLRRSNARMVKWSDGSWTLVVGAEA 125          
BLAST of mRNA_H-paniculata_contig21295.5588.1 vs. uniprot
Match: A0A3S1HL45_ELYCH (Uncharacterized protein n=1 Tax=Elysia chlorotica TaxID=188477 RepID=A0A3S1HL45_ELYCH)

HSP 1 Score: 68.9 bits (167), Expect = 5.530e-12
Identity = 31/50 (62.00%), Postives = 37/50 (74.00%), Query Frame = 0
Query:   10 NIVRWRHKRDNRGRLELGHDGRPIRESNARVVKWSDGSMQLLVGDEAFDI 59
            N VRWR K D  G   L  +G+P+RESNAR+VKWSDGSM L +GDE FD+
Sbjct:  507 NTVRWRKKLDADGNEMLDEEGKPLRESNARIVKWSDGSMSLHLGDEIFDV 556          
BLAST of mRNA_H-paniculata_contig21295.5588.1 vs. uniprot
Match: A0A2R5G957_9STRA (RNA polymerase-associated protein LEO1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G957_9STRA)

HSP 1 Score: 65.5 bits (158), Expect = 9.000e-11
Identity = 28/50 (56.00%), Postives = 40/50 (80.00%), Query Frame = 0
Query:   10 NIVRWRHKRDNRGRLELGHDGRPIRESNARVVKWSDGSMQLLVGDEAFDI 59
            NI+RWR+K ++R  +E   DG+P+ ESN+R V+WSDGS+QL +GDE FD+
Sbjct:  155 NIIRWRYKMNDRREIEK-KDGKPVIESNSRFVEWSDGSVQLYIGDEVFDV 203          
BLAST of mRNA_H-paniculata_contig21295.5588.1 vs. uniprot
Match: A0A8J1XS43_OWEFU (Ofus.G061499 protein (Fragment) n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1XS43_OWEFU)

HSP 1 Score: 65.1 bits (157), Expect = 1.230e-10
Identity = 27/50 (54.00%), Postives = 36/50 (72.00%), Query Frame = 0
Query:   10 NIVRWRHKRDNRGRLELGHDGRPIRESNARVVKWSDGSMQLLVGDEAFDI 59
            N +RWR K+D  G   L  +G P+RESNAR+++WSDGSM L +G E FD+
Sbjct:  193 NTIRWRDKKDAEGNQILDEEGNPVRESNARMIRWSDGSMSLHLGVEVFDV 242          
BLAST of mRNA_H-paniculata_contig21295.5588.1 vs. uniprot
Match: A0A2R2MJW2_LINUN (RNA polymerase-associated protein LEO1 n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A2R2MJW2_LINUN)

HSP 1 Score: 64.7 bits (156), Expect = 1.700e-10
Identity = 25/50 (50.00%), Postives = 38/50 (76.00%), Query Frame = 0
Query:   10 NIVRWRHKRDNRGRLELGHDGRPIRESNARVVKWSDGSMQLLVGDEAFDI 59
            N +RWR K+D  G + +  +G+ +RESNAR+++WSDGSM L +G+E FD+
Sbjct:  370 NTIRWRPKKDEFGNIMMDENGKQLRESNARIIRWSDGSMSLHLGNEVFDV 419          
BLAST of mRNA_H-paniculata_contig21295.5588.1 vs. uniprot
Match: UPI0007113C22 (RNA polymerase-associated protein leo1 n=1 Tax=Blastocystis sp. subtype 4 TaxID=944170 RepID=UPI0007113C22)

HSP 1 Score: 63.5 bits (153), Expect = 3.140e-10
Identity = 27/45 (60.00%), Postives = 36/45 (80.00%), Query Frame = 0
Query:   11 IVRWRHKRDNRGRLELGHDGRPIRESNARVVKWSDGSMQLLVGDE 55
            ++RWR K+D+ G +     G+PIRESNAR+VKWSDGS QLL+GD+
Sbjct:  112 LIRWRWKKDSNGIVIRDARGKPIRESNARIVKWSDGSYQLLIGDD 156          
BLAST of mRNA_H-paniculata_contig21295.5588.1 vs. uniprot
Match: A0A0B7ALU3_9EUPU (Uncharacterized protein (Fragment) n=1 Tax=Arion vulgaris TaxID=1028688 RepID=A0A0B7ALU3_9EUPU)

HSP 1 Score: 63.9 bits (154), Expect = 3.160e-10
Identity = 28/50 (56.00%), Postives = 35/50 (70.00%), Query Frame = 0
Query:   10 NIVRWRHKRDNRGRLELGHDGRPIRESNARVVKWSDGSMQLLVGDEAFDI 59
            N +RWR K D  G      + +P+RESNARVVKW+DGSM L +GDE FD+
Sbjct:  253 NTIRWRRKFDEEGNEMKDENDQPVRESNARVVKWTDGSMSLHLGDEIFDV 302          
BLAST of mRNA_H-paniculata_contig21295.5588.1 vs. uniprot
Match: A0A663ECI3_AQUCH (RNA polymerase-associated protein LEO1 n=10 Tax=Aves TaxID=8782 RepID=A0A663ECI3_AQUCH)

HSP 1 Score: 63.2 bits (152), Expect = 5.950e-10
Identity = 29/58 (50.00%), Postives = 38/58 (65.52%), Query Frame = 0
Query:    2 ADEFKYTTNIVRWRHKRDNRGRLELGHDGRPIRESNARVVKWSDGSMQLLVGDEAFDI 59
            ++  KY  N +RWR +RD         +G  IRESNAR+VKWSDGSM L +G+E FD+
Sbjct:  385 SNTIKYVENTIRWRMRRD--------EEGNEIRESNARIVKWSDGSMSLHLGNEVFDV 434          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig21295.5588.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CAV3_9STRA7.950e-1951.32Leo1-like protein-domain-containing protein n=1 Ta... [more]
D7FUQ9_ECTSI8.250e-1376.19Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S1FRB7_9STRA1.690e-1257.14Hypothetical protein (Fragment) n=1 Tax=Corethron ... [more]
A0A3S1HL45_ELYCH5.530e-1262.00Uncharacterized protein n=1 Tax=Elysia chlorotica ... [more]
A0A2R5G957_9STRA9.000e-1156.00RNA polymerase-associated protein LEO1 n=1 Tax=Hon... [more]
A0A8J1XS43_OWEFU1.230e-1054.00Ofus.G061499 protein (Fragment) n=1 Tax=Owenia fus... [more]
A0A2R2MJW2_LINUN1.700e-1050.00RNA polymerase-associated protein LEO1 n=1 Tax=Lin... [more]
UPI0007113C223.140e-1060.00RNA polymerase-associated protein leo1 n=1 Tax=Bla... [more]
A0A0B7ALU3_9EUPU3.160e-1056.00Uncharacterized protein (Fragment) n=1 Tax=Arion v... [more]
A0A663ECI3_AQUCH5.950e-1050.00RNA polymerase-associated protein LEO1 n=10 Tax=Av... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007149Leo1-like proteinPFAMPF04004Leo1coord: 3..63
e-value: 3.3E-19
score: 69.3
IPR007149Leo1-like proteinPANTHERPTHR23146LEO1 PROTEINcoord: 5..63

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig21295contigH-paniculata_contig21295:384..596 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig21295.5588.1mRNA_H-paniculata_contig21295.5588.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig21295 384..596 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig21295.5588.1 ID=prot_H-paniculata_contig21295.5588.1|Name=mRNA_H-paniculata_contig21295.5588.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=71bp
EADEFKYTTNIVRWRHKRDNRGRLELGHDGRPIRESNARVVKWSDGSMQL
LVGDEAFDIGEHSIDRWGVL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007149Leo1