prot_H-paniculata_contig2126.5573.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2126.5573.1
Unique Nameprot_H-paniculata_contig2126.5573.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length746
Homology
BLAST of mRNA_H-paniculata_contig2126.5573.1 vs. uniprot
Match: D7G4F1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4F1_ECTSI)

HSP 1 Score: 107 bits (267), Expect = 5.330e-21
Identity = 94/293 (32.08%), Postives = 138/293 (47.10%), Query Frame = 0
Query:  355 RKVFGLLMVISFLLLVISSTTMLFYGSEVNSVTLVIGAATVLFIADVDEKVLLVLRNVDHKWRLFWIFEAIGISLCLALMAVTATGNAKSVNSDGSNKCPQSDIATIR-------CYVFDWGFFVILSPISVTIVSFLSSCAIARPA-------FFFRTLQERCFDLLVLSWIGH-FFATASVGVQGAVYVDVVPTVCVLLCSLVYTMYNGNDVKDLLLQMWTDARK---VSWRSARWLLVAEIVLLLYVHVWAFYLSMYKSDDAEKHWAAPVGHWPTALFAFLTT-ALTWWL 628
            R++FG+ +V + L L+ +S  +LF+ SE N V LVIGAA VLFIADVDEK   VL+NV  KWRLFW+ E IG+S  LA  +V ATGN      DG     + D A          C +F W +  +  P++VT+ + L +  ++ P        F  R  Q   F LL L W+   +F   ++     + + VV    V+ C     +Y     +       TD R+   + W          +V LL+V + A   S+   D+ +     P   +  A+ A +T   L  WL
Sbjct:  155 RRLFGVFLVATLLTLIGASVRVLFFSSEDN-VNLVIGAAAVLFIADVDEKAHTVLKNVSGKWRLFWVLEVIGMSFVLATFSVKATGN------DGRVAGREPDRAACAAWTDGDDCDIFTWPYIFLELPLTVTVCALLITSEVSEPISPIHVRRFHDRPCQWSMFSLLALCWVSMPYFWRWTIVYALVIVLFVVVVALVIACRSFRELYRA-FTRGAERFSATDKRRRFYLFWAGM-------VVQLLWVTLDAISFSLSDDDEDDDSHFFPDSVYSPAVNAIITLDTLVLWL 432          
BLAST of mRNA_H-paniculata_contig2126.5573.1 vs. uniprot
Match: A0A6H5JP75_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP75_9PHAE)

HSP 1 Score: 104 bits (259), Expect = 9.630e-20
Identity = 121/406 (29.80%), Postives = 189/406 (46.55%), Query Frame = 0
Query:  355 RKVFGLLMVISFLLLVISSTTMLFYGSEVNSVTLVIGAATVLFIADVDEKVLLVLRNVDHKWRLFWIFEAIGISLCLALMAVTATGNAKSVNSDGSNKCPQSDIATIR--CYVFDWGFFVILSPISVTIVSFLSSCAIARPAFFFRTLQERCFDLLVLSWIG--HFFATASVGVQGAVYVDVVPTVCVLLCSLVYTMYNGNDVKDLLLQMWTDARKVSWRSAR---WLLVAEIVL-LLYVHVWAFYLSMYKSDD---AEKHWAAPVGHWPTALFAFLTTAL-TWWLL-WGILATEAGNLGENPPLTQALALLWGWSFHTLLRSTFEDIFNICMSNGIENNPVAFIGFRLFLECLFTTLIGIEGVCVRAEKTRGIAFWAAATYFRDIVITWGLI---WANARTEGTI 744
            R++FG+ +V++FL L+ +S  +LF+ S+ N VTLVIGAA VLFIADVDEK   VL+N   K RL W+ E IG+S  LA  ++ AT N   V    + K   SD A     C +F W +     P++VT+         +RP     TL      LL L W+   +FF           ++ ++    VL   +V  +      ++L       A + +    R   +L  A IV+ LL V + A Y S+  +D    +E  ++A      + L A +  A+ +WW+   GI    + ++  +PPL Q + L WG  +  L+  T   +F          + + +I       C +  +IG      RAE  + +A+W AA+    +V T GL    W +A  E  +
Sbjct:  141 RRLFGVFLVVTFLTLIGASVRVLFFSSQDN-VTLVIGAAAVLFIADVDEKAHTVLKNFSGKSRLCWVLEIIGMSFVLATFSLKATDNYGRVAGKDAYK---SDCAGWGNDCGIFTWQYIFFELPLTVTV---------SRP-----TLAMEHVLLLALCWVSMPYFFR----------WIILLAVAIVLFVVVVAVVIARRSFRELYRAFTQGAERFTATDKRRRFYLFWAGIVVQLLRVALTAMYFSLSDNDQLVFSESIFSAEDAI--SFLDALVHLAIFSWWICGMGISEGPSRDIAIDPPL-QPMLLGWGLYYGVLIVLTL--VFEWIRGPSDFADAMVYIAEWSVRHC-WNIMIGTW--VWRAEGKKDVAYWIAAS---GLVFTMGLCVAAWVDAWKESVL 507          
BLAST of mRNA_H-paniculata_contig2126.5573.1 vs. uniprot
Match: A0A6H5KBY2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBY2_9PHAE)

HSP 1 Score: 93.2 bits (230), Expect = 3.980e-17
Identity = 58/127 (45.67%), Postives = 77/127 (60.63%), Query Frame = 0
Query:   71 WPRRAFKLAEFMPDSVYLWACGERSSSEQSTCGNQNDHKAP-SRCEAVAAWIILLTQILCYVQLTIMSIRWSGATQDP--SEGSFEEAPATTSKSTSYSILAVAAAMYLVLAIAAADLFGGLALLLE 194
            WP + F+L + +PDSVYLWACGER          + D   P SR EAVAAW++L++Q +CY  L +++       Q P  S+ S  +      +S  YSILA+A AMYL+L I AADL+GG AL LE
Sbjct:  116 WPGKDFRLKKVLPDSVYLWACGER---------GEGDAPYPVSRSEAVAAWVVLISQAVCYAGLWVIT-----GNQPPTQSQTSAIDDDFYADRSPDYSILAIAGAMYLLLTIVAADLWGGCALCLE 228          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2126.5573.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G4F1_ECTSI5.330e-2132.08Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JP75_9PHAE9.630e-2029.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KBY2_9PHAE3.980e-1745.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 507..526
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 194..356
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 468..495
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 139..166
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 663..681
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..116
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 682..702
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 439..467
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 380..384
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 117..138
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 527..531
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 418..438
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 407..417
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 357..379
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 737..745
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 572..592
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 612..633
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 496..506
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 552..571
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 645..662
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 385..406
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 634..644
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 593..611
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 532..551
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 714..736
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 703..713
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 167..193
NoneNo IPR availableTMHMMTMhelixcoord: 507..529
NoneNo IPR availableTMHMMTMhelixcoord: 574..596
NoneNo IPR availableTMHMMTMhelixcoord: 171..193
NoneNo IPR availableTMHMMTMhelixcoord: 714..736
NoneNo IPR availableTMHMMTMhelixcoord: 464..486
NoneNo IPR availableTMHMMTMhelixcoord: 357..379
NoneNo IPR availableTMHMMTMhelixcoord: 608..630
NoneNo IPR availableTMHMMTMhelixcoord: 389..411
NoneNo IPR availableTMHMMTMhelixcoord: 418..440
NoneNo IPR availableTMHMMTMhelixcoord: 685..707
NoneNo IPR availableTMHMMTMhelixcoord: 116..138

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2126contigH-paniculata_contig2126:17383..20583 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2126.5573.1mRNA_H-paniculata_contig2126.5573.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2126 15354..20639 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2126.5573.1 ID=prot_H-paniculata_contig2126.5573.1|Name=mRNA_H-paniculata_contig2126.5573.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=746bp
MISLATEGKSQSSRQLEATEAGTANATEAGTAKRSVEGTLSSPYPSRALS
MISRNAESAACGTGCSGKATWPRRAFKLAEFMPDSVYLWACGERSSSEQS
TCGNQNDHKAPSRCEAVAAWIILLTQILCYVQLTIMSIRWSGATQDPSEG
SFEEAPATTSKSTSYSILAVAAAMYLVLAIAAADLFGGLALLLERRPLAP
DASDSAETAAQSIERYLYRSGHSQTTENQADMAPGVSTPNTGFRGQAQHD
VDNVTGSDNASVSRSGEISRPERLDFRACPGLDDMTRRALADVQHQLVAL
SADFHDLRNGLVVAPTTSRNRESAPGTADAGTRSGLEEPRAEMTRPRRYR
AWIQRKVFGLLMVISFLLLVISSTTMLFYGSEVNSVTLVIGAATVLFIAD
VDEKVLLVLRNVDHKWRLFWIFEAIGISLCLALMAVTATGNAKSVNSDGS
NKCPQSDIATIRCYVFDWGFFVILSPISVTIVSFLSSCAIARPAFFFRTL
QERCFDLLVLSWIGHFFATASVGVQGAVYVDVVPTVCVLLCSLVYTMYNG
NDVKDLLLQMWTDARKVSWRSARWLLVAEIVLLLYVHVWAFYLSMYKSDD
AEKHWAAPVGHWPTALFAFLTTALTWWLLWGILATEAGNLGENPPLTQAL
ALLWGWSFHTLLRSTFEDIFNICMSNGIENNPVAFIGFRLFLECLFTTLI
GIEGVCVRAEKTRGIAFWAAATYFRDIVITWGLIWANARTEGTIN*
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