prot_H-paniculata_contig2119.5551.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2119.5551.1
Unique Nameprot_H-paniculata_contig2119.5551.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length102
Homology
BLAST of mRNA_H-paniculata_contig2119.5551.1 vs. uniprot
Match: A0A8F0JXK8_9PHAE (Ribosomal protein S5 n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0JXK8_9PHAE)

HSP 1 Score: 188 bits (478), Expect = 1.780e-59
Identity = 97/102 (95.10%), Postives = 100/102 (98.04%), Query Frame = 0
Query:    1 MTTSNQKIVWEKRVVKVSRVSKVVKGGKKISFRATVVVGNMEGKVGVGIGKAEEVSTAIKKAETDAQKNVINVPISEGKTIPHPIMGIDGGSKVFIRPAVQG 102
            MTTSN KIVWEKRVVK+SRVSKVVKGGKKISFRATVVVG+MEGKVGVGIGKAEEVSTAIKKAETDAQKNVINVPISEGKTIPHPI+GIDGGSKVFIRPAV G
Sbjct:    1 MTTSNNKIVWEKRVVKISRVSKVVKGGKKISFRATVVVGDMEGKVGVGIGKAEEVSTAIKKAETDAQKNVINVPISEGKTIPHPIIGIDGGSKVFIRPAVPG 102          
BLAST of mRNA_H-paniculata_contig2119.5551.1 vs. uniprot
Match: A0A141BSM5_9PHAE (30S ribosomal protein S5, chloroplastic n=13 Tax=Sargassaceae TaxID=3014 RepID=A0A141BSM5_9PHAE)

HSP 1 Score: 167 bits (422), Expect = 5.570e-51
Identity = 79/102 (77.45%), Postives = 97/102 (95.10%), Query Frame = 0
Query:    1 MTTSNQKIVWEKRVVKVSRVSKVVKGGKKISFRATVVVGNMEGKVGVGIGKAEEVSTAIKKAETDAQKNVINVPISEGKTIPHPIMGIDGGSKVFIRPAVQG 102
            M+T N+KI+WE+RVVKVSRVSKVVKGGKKISFRATVV+G+ME KVGVG+GKA+EVS A+KKAETDA+KN+IN+P++EGKTIPH ++G+ GGSK+FIRPAVQG
Sbjct:    1 MSTENEKIIWEQRVVKVSRVSKVVKGGKKISFRATVVIGDMEQKVGVGVGKAKEVSIAVKKAETDAKKNIINIPVAEGKTIPHSMIGVAGGSKIFIRPAVQG 102          
BLAST of mRNA_H-paniculata_contig2119.5551.1 vs. uniprot
Match: D1GJR6_FUCVE (30S ribosomal protein S5, chloroplastic n=3 Tax=Fucaceae TaxID=3010 RepID=D1GJR6_FUCVE)

HSP 1 Score: 166 bits (421), Expect = 7.900e-51
Identity = 84/102 (82.35%), Postives = 94/102 (92.16%), Query Frame = 0
Query:    1 MTTSNQKIVWEKRVVKVSRVSKVVKGGKKISFRATVVVGNMEGKVGVGIGKAEEVSTAIKKAETDAQKNVINVPISEGKTIPHPIMGIDGGSKVFIRPAVQG 102
            M T N KI+WE+RVVKVSRVSKVVKGGKKISFRATVVVG+ME KVGVG+GKA+EVSTA+KKAETDA+KNVIN+PI EGKTIPH ++GI GGSKVFIRPAV G
Sbjct:    1 MNTENTKIIWEQRVVKVSRVSKVVKGGKKISFRATVVVGDMEDKVGVGVGKAKEVSTAVKKAETDAKKNVINIPIVEGKTIPHSMIGIAGGSKVFIRPAVPG 102          
BLAST of mRNA_H-paniculata_contig2119.5551.1 vs. uniprot
Match: A0A0S0GN90_COSCS (30S ribosomal protein S5, chloroplastic n=30 Tax=Phaeophyceae TaxID=2870 RepID=A0A0S0GN90_COSCS)

HSP 1 Score: 163 bits (413), Expect = 1.300e-49
Identity = 83/102 (81.37%), Postives = 94/102 (92.16%), Query Frame = 0
Query:    1 MTTSNQKIVWEKRVVKVSRVSKVVKGGKKISFRATVVVGNMEGKVGVGIGKAEEVSTAIKKAETDAQKNVINVPISEGKTIPHPIMGIDGGSKVFIRPAVQG 102
            MTT N+KI WE+RVVK+SRVSKVVKGGKKISFRATVVVG+ME +VGVG+GKAEEVSTAIKKAETDA+KNV+ +PI EGKTIPH ++GI GGSKVFIRPAV G
Sbjct:    1 MTTPNKKIRWEQRVVKISRVSKVVKGGKKISFRATVVVGDMEERVGVGVGKAEEVSTAIKKAETDAKKNVLTIPIVEGKTIPHAMVGIAGGSKVFIRPAVPG 102          
BLAST of mRNA_H-paniculata_contig2119.5551.1 vs. uniprot
Match: A0A7T8JJZ4_SCYLO (30S ribosomal protein S5, chloroplastic n=7 Tax=Ectocarpales TaxID=2877 RepID=A0A7T8JJZ4_SCYLO)

HSP 1 Score: 159 bits (401), Expect = 1.080e-47
Identity = 83/102 (81.37%), Postives = 92/102 (90.20%), Query Frame = 0
Query:    1 MTTSNQKIVWEKRVVKVSRVSKVVKGGKKISFRATVVVGNMEGKVGVGIGKAEEVSTAIKKAETDAQKNVINVPISEGKTIPHPIMGIDGGSKVFIRPAVQG 102
            MT  N+ I WEKRVVKVSRVSKVVKGGKKISFRATVVVG+ME +VGVG+GKAEEVSTAIKKAETDA+KNVI VPI+EGKTIPH  +G++ GSKVFIRPAV G
Sbjct:    8 MTNQNKDINWEKRVVKVSRVSKVVKGGKKISFRATVVVGDMEYQVGVGVGKAEEVSTAIKKAETDARKNVIIVPIAEGKTIPHATVGVECGSKVFIRPAVPG 109          
BLAST of mRNA_H-paniculata_contig2119.5551.1 vs. uniprot
Match: A0A1I9LVF8_9PHAE (30S ribosomal protein S5, chloroplastic n=1 Tax=Pleurocladia lacustris TaxID=246121 RepID=A0A1I9LVF8_9PHAE)

HSP 1 Score: 150 bits (380), Expect = 1.400e-44
Identity = 80/103 (77.67%), Postives = 90/103 (87.38%), Query Frame = 0
Query:    1 MTTSNQKIVWEKRVVKVSRVSKVVKGGKKISFRATVVVGNMEGK-VGVGIGKAEEVSTAIKKAETDAQKNVINVPISEGKTIPHPIMGIDGGSKVFIRPAVQG 102
            MTT N+K  WEKRVVK+SRVSKVVKGGKKISFRATVVVG++E K VGVG+GKA++VSTA+KKAETD  KNVINV I+EGKTIPH   GI+ GSKVFIRPAV G
Sbjct:    1 MTTENKKSSWEKRVVKISRVSKVVKGGKKISFRATVVVGDIEKKQVGVGVGKAKDVSTAVKKAETDGIKNVINVQIAEGKTIPHATFGIECGSKVFIRPAVPG 103          
BLAST of mRNA_H-paniculata_contig2119.5551.1 vs. uniprot
Match: A0A8E6D2P2_9PHAE (30S ribosomal protein S5, chloroplastic n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A8E6D2P2_9PHAE)

HSP 1 Score: 137 bits (345), Expect = 3.060e-39
Identity = 68/100 (68.00%), Postives = 83/100 (83.00%), Query Frame = 0
Query:    3 TSNQKIVWEKRVVKVSRVSKVVKGGKKISFRATVVVGNMEGKVGVGIGKAEEVSTAIKKAETDAQKNVINVPISEGKTIPHPIMGIDGGSKVFIRPAVQG 102
            T N+ + WEKRVVK++RVSKVVKGGKK+SFRAT+V GN  G VGVGIGKAEE + AIKKAE +A+KN++ VP+ +G+TIPH I+G  GG KVFIRPAV G
Sbjct:    6 TLNKNVRWEKRVVKIARVSKVVKGGKKLSFRATLVTGNRNGLVGVGIGKAEETALAIKKAEVNAKKNLVKVPLVKGQTIPHSIIGNTGGCKVFIRPAVPG 105          
BLAST of mRNA_H-paniculata_contig2119.5551.1 vs. uniprot
Match: A0A2I4Q2I9_9PHAE (30S ribosomal protein S5, chloroplastic n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A2I4Q2I9_9PHAE)

HSP 1 Score: 137 bits (344), Expect = 4.090e-39
Identity = 70/93 (75.27%), Postives = 80/93 (86.02%), Query Frame = 0
Query:   10 WEKRVVKVSRVSKVVKGGKKISFRATVVVGNMEGKVGVGIGKAEEVSTAIKKAETDAQKNVINVPISEGKTIPHPIMGIDGGSKVFIRPAVQG 102
            WEKRVVKVSRVSKVVKGGKKISFRATVV+G+ + KVGVG+GKA EVS AIKKAET+A+KNVI + +  G+TI H I+G  GGSKVFIRPAV G
Sbjct:   11 WEKRVVKVSRVSKVVKGGKKISFRATVVIGDKKNKVGVGMGKAVEVSNAIKKAETNAKKNVITITVESGQTISHSILGAAGGSKVFIRPAVPG 103          
BLAST of mRNA_H-paniculata_contig2119.5551.1 vs. uniprot
Match: B7T1W8_VAULI (30S ribosomal protein S5, chloroplastic n=1 Tax=Vaucheria litorea TaxID=109269 RepID=B7T1W8_VAULI)

HSP 1 Score: 125 bits (313), Expect = 3.720e-34
Identity = 66/109 (60.55%), Postives = 83/109 (76.15%), Query Frame = 0
Query:    2 TTSNQK--------IVWEKRVVKVSRVSKVVKGGKKISFRATVVVGNMEGKVGVGIGKAEEVSTAIKKAETDAQKNVINVPISEGKTIPHPIMGIDGGSKVFIRPAVQG 102
            TT N+K        I WE+RVV++SRV KVVKGGKK+SFRATV++GN    VGVG+GKA+EVSTAI+KA   A+KN+I +P+++ KTIPH I+GIDG SKV IR A  G
Sbjct:   14 TTRNRKNKKVQEKTIRWEQRVVQISRVVKVVKGGKKLSFRATVIIGNKNSHVGVGVGKADEVSTAIQKAVNHARKNLIQIPLTKTKTIPHNIIGIDGASKVLIRTAGPG 122          
BLAST of mRNA_H-paniculata_contig2119.5551.1 vs. uniprot
Match: A0A1C9CCF6_9FLOR (30S ribosomal protein S5, chloroplastic n=1 Tax=Asparagopsis taxiformis TaxID=260499 RepID=A0A1C9CCF6_9FLOR)

HSP 1 Score: 122 bits (306), Expect = 2.810e-33
Identity = 56/100 (56.00%), Postives = 80/100 (80.00%), Query Frame = 0
Query:    3 TSNQKIVWEKRVVKVSRVSKVVKGGKKISFRATVVVGNMEGKVGVGIGKAEEVSTAIKKAETDAQKNVINVPISEGKTIPHPIMGIDGGSKVFIRPAVQG 102
            +  Q+ +WE+RVV+V RV+KVVKGGKK+SFRA +VVGN +G++GVG+GKA +V  A+KK  TDA+K++IN+P++   +IPHP+ GI G +KV IRP+  G
Sbjct:   10 SKEQETIWEERVVQVRRVTKVVKGGKKLSFRAILVVGNEKGQIGVGVGKASDVIGAVKKGVTDAKKHLINIPLTHTNSIPHPMQGISGAAKVMIRPSAPG 109          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2119.5551.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8F0JXK8_9PHAE1.780e-5995.10Ribosomal protein S5 n=1 Tax=Protohalopteris sp. T... [more]
A0A141BSM5_9PHAE5.570e-5177.4530S ribosomal protein S5, chloroplastic n=13 Tax=S... [more]
D1GJR6_FUCVE7.900e-5182.3530S ribosomal protein S5, chloroplastic n=3 Tax=Fu... [more]
A0A0S0GN90_COSCS1.300e-4981.3730S ribosomal protein S5, chloroplastic n=30 Tax=P... [more]
A0A7T8JJZ4_SCYLO1.080e-4781.3730S ribosomal protein S5, chloroplastic n=7 Tax=Ec... [more]
A0A1I9LVF8_9PHAE1.400e-4477.6730S ribosomal protein S5, chloroplastic n=1 Tax=Pl... [more]
A0A8E6D2P2_9PHAE3.060e-3968.0030S ribosomal protein S5, chloroplastic n=1 Tax=Is... [more]
A0A2I4Q2I9_9PHAE4.090e-3975.2730S ribosomal protein S5, chloroplastic n=1 Tax=Di... [more]
B7T1W8_VAULI3.720e-3460.5530S ribosomal protein S5, chloroplastic n=1 Tax=Va... [more]
A0A1C9CCF6_9FLOR2.810e-3356.0030S ribosomal protein S5, chloroplastic n=1 Tax=As... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013810Ribosomal protein S5, N-terminalPFAMPF00333Ribosomal_S5coord: 10..74
e-value: 1.2E-25
score: 89.2
IPR013810Ribosomal protein S5, N-terminalPROSITEPS50881S5_DSRBDcoord: 10..73
score: 23.961
NoneNo IPR availableGENE3D3.30.160.20coord: 2..72
e-value: 3.1E-26
score: 93.0
NoneNo IPR availablePANTHERPTHR13718:SF9430S RIBOSOMAL PROTEIN S5, CHLOROPLASTICcoord: 9..102
NoneNo IPR availableSUPERFAMILY54768dsRNA-binding domain-likecoord: 10..75
IPR000851Ribosomal protein S5PANTHERPTHR13718RIBOSOMAL S SUBUNITcoord: 9..102
IPR018192Ribosomal protein S5, N-terminal, conserved sitePROSITEPS00585RIBOSOMAL_S5coord: 27..59

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2119contigH-paniculata_contig2119:22395..22700 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2119.5551.1mRNA_H-paniculata_contig2119.5551.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2119 22395..22700 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2119.5551.1 ID=prot_H-paniculata_contig2119.5551.1|Name=mRNA_H-paniculata_contig2119.5551.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=102bp
MTTSNQKIVWEKRVVKVSRVSKVVKGGKKISFRATVVVGNMEGKVGVGIG
KAEEVSTAIKKAETDAQKNVINVPISEGKTIPHPIMGIDGGSKVFIRPAV
QG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013810Ribosomal_S5_N
IPR000851Ribosomal_S5
IPR018192Ribosomal_S5_N_CS