prot_H-paniculata_contig2119.5550.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2119.5550.1
Unique Nameprot_H-paniculata_contig2119.5550.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length110
Homology
BLAST of mRNA_H-paniculata_contig2119.5550.1 vs. uniprot
Match: A0A8F0F787_9PHAE (Ribosomal protein L18 n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0F787_9PHAE)

HSP 1 Score: 197 bits (502), Expect = 7.860e-64
Identity = 102/109 (93.58%), Postives = 106/109 (97.25%), Query Frame = 0
Query:    1 MGKREKKRIKGTESKPRLSIYRSNKHIYVQVIDDSSSKTIASCSTLEMEVKAKCEKTATKLASKIVGELIGTRLRAKNIKEIIFDRGKKPYHGRIKELADGARIGGLSF 109
            MGKREKKRIKGTE KPRLSIYRSNKHIYVQVIDDS SKTIASCSTL++EVKAKCEKTATKLASKIVGELIG RLRAKNIKEIIFDRGKKPYHGRIKELA+GAR+GGLSF
Sbjct:    1 MGKREKKRIKGTELKPRLSIYRSNKHIYVQVIDDSCSKTIASCSTLDIEVKAKCEKTATKLASKIVGELIGIRLRAKNIKEIIFDRGKKPYHGRIKELAEGARLGGLSF 109          
BLAST of mRNA_H-paniculata_contig2119.5550.1 vs. uniprot
Match: A0A8F0JZH3_9PHAE (Ribosomal protein L18 n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0JZH3_9PHAE)

HSP 1 Score: 172 bits (437), Expect = 6.420e-54
Identity = 88/109 (80.73%), Postives = 99/109 (90.83%), Query Frame = 0
Query:    1 MGKREKKRIKGTESKPRLSIYRSNKHIYVQVIDDSSSKTIASCSTLEMEVKAKCEKTATKLASKIVGELIGTRLRAKNIKEIIFDRGKKPYHGRIKELADGARIGGLSF 109
            MGKREKK+IKGT  KPRL+I+RSNKHIY QVIDDS SKTI SCSTLE+EVK KCEKT+TK ASKIVGE+IGTRL A+NIKEIIFDRG KPYHGRIKELA+GAR+ G++F
Sbjct:    1 MGKREKKKIKGTNLKPRLAIHRSNKHIYAQVIDDSCSKTIISCSTLEIEVKTKCEKTSTKEASKIVGEVIGTRLLAENIKEIIFDRGTKPYHGRIKELAEGARLVGVNF 109          
BLAST of mRNA_H-paniculata_contig2119.5550.1 vs. uniprot
Match: D1J737_ECTSI (50S ribosomal protein L18 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D1J737_ECTSI)

HSP 1 Score: 170 bits (431), Expect = 5.270e-53
Identity = 87/109 (79.82%), Postives = 95/109 (87.16%), Query Frame = 0
Query:    1 MGKREKKRIKGTESKPRLSIYRSNKHIYVQVIDDSSSKTIASCSTLEMEVKAKCEKTATKLASKIVGELIGTRLRAKNIKEIIFDRGKKPYHGRIKELADGARIGGLSF 109
            MGKREKKRIKG   KPRL+++RSNKHIY QVIDDS S TI SCSTLE+EVKAKCEKT+ KLASKIVGE IGTRL   NIKEI+FDRGKK YHGRIKELA+GAR+ GLSF
Sbjct:    1 MGKREKKRIKGNHLKPRLTVFRSNKHIYAQVIDDSDSTTITSCSTLEIEVKAKCEKTSNKLASKIVGETIGTRLLKHNIKEIVFDRGKKSYHGRIKELAEGARLVGLSF 109          
BLAST of mRNA_H-paniculata_contig2119.5550.1 vs. uniprot
Match: A0A0R6M4V6_UNDPI (50S ribosomal protein L18, chloroplastic n=28 Tax=Laminariales TaxID=2886 RepID=A0A0R6M4V6_UNDPI)

HSP 1 Score: 169 bits (427), Expect = 2.150e-52
Identity = 86/109 (78.90%), Postives = 96/109 (88.07%), Query Frame = 0
Query:    1 MGKREKKRIKGTESKPRLSIYRSNKHIYVQVIDDSSSKTIASCSTLEMEVKAKCEKTATKLASKIVGELIGTRLRAKNIKEIIFDRGKKPYHGRIKELADGARIGGLSF 109
            MGKREKK IKG   KPRL+++RSNKHIY QVIDDS SKTI SCSTLE+EVKAKCEKT+ K+ASKIVGE+IG RL  +NIKEIIFDRGKK YHGRIKELA+GAR+ GLSF
Sbjct:    1 MGKREKKIIKGNNIKPRLAVFRSNKHIYAQVIDDSCSKTIISCSTLELEVKAKCEKTSNKMASKIVGEIIGARLLEENIKEIIFDRGKKSYHGRIKELAEGARLVGLSF 109          
BLAST of mRNA_H-paniculata_contig2119.5550.1 vs. uniprot
Match: A0A1I9LVY4_9PHAE (50S ribosomal protein L18, chloroplastic n=1 Tax=Pleurocladia lacustris TaxID=246121 RepID=A0A1I9LVY4_9PHAE)

HSP 1 Score: 166 bits (421), Expect = 1.760e-51
Identity = 84/109 (77.06%), Postives = 95/109 (87.16%), Query Frame = 0
Query:    1 MGKREKKRIKGTESKPRLSIYRSNKHIYVQVIDDSSSKTIASCSTLEMEVKAKCEKTATKLASKIVGELIGTRLRAKNIKEIIFDRGKKPYHGRIKELADGARIGGLSF 109
            MGKRE+KRIKG  +KPRL+++RSNKHIY QVI+D  S TI SCSTLE+EVKAKCEKT  K ASKIVGE+IGTRL  KNIKEI+FDRGKK YHGRIKELA+GAR+ GLSF
Sbjct:    1 MGKRERKRIKGDHNKPRLTVFRSNKHIYAQVINDYDSTTITSCSTLEVEVKAKCEKTCNKPASKIVGEIIGTRLMKKNIKEIVFDRGKKSYHGRIKELAEGARLVGLSF 109          
BLAST of mRNA_H-paniculata_contig2119.5550.1 vs. uniprot
Match: A0A8F0JYJ6_9PHAE (Ribosomal protein L18 n=1 Tax=Chorda asiatica TaxID=1281577 RepID=A0A8F0JYJ6_9PHAE)

HSP 1 Score: 166 bits (421), Expect = 1.760e-51
Identity = 85/109 (77.98%), Postives = 95/109 (87.16%), Query Frame = 0
Query:    1 MGKREKKRIKGTESKPRLSIYRSNKHIYVQVIDDSSSKTIASCSTLEMEVKAKCEKTATKLASKIVGELIGTRLRAKNIKEIIFDRGKKPYHGRIKELADGARIGGLSF 109
            MGKREKK+IKG   KPRL+IYRSNKHIY QVIDDS SKTI SCSTLE+EVK KCEKT+ K+ASKIVGE+I TRL  +NIKEIIFDRGK+ YHGRIKELA+GAR+ GL F
Sbjct:    1 MGKREKKKIKGNNLKPRLAIYRSNKHIYAQVIDDSCSKTILSCSTLEIEVKEKCEKTSNKVASKIVGEIIATRLLQENIKEIIFDRGKRSYHGRIKELAEGARLVGLHF 109          
BLAST of mRNA_H-paniculata_contig2119.5550.1 vs. uniprot
Match: A0A7T8JK65_SCYLO (50S ribosomal protein L18, chloroplastic n=5 Tax=Scytosiphonaceae TaxID=2891 RepID=A0A7T8JK65_SCYLO)

HSP 1 Score: 166 bits (419), Expect = 3.670e-51
Identity = 83/109 (76.15%), Postives = 97/109 (88.99%), Query Frame = 0
Query:    1 MGKREKKRIKGTESKPRLSIYRSNKHIYVQVIDDSSSKTIASCSTLEMEVKAKCEKTATKLASKIVGELIGTRLRAKNIKEIIFDRGKKPYHGRIKELADGARIGGLSF 109
            MGKREKKRIKG   KPRL+++RSNKHIY QVIDDS S TI SCSTLE+EVKAKCEKT+ K+ASKIVGE+IGTRL  ++IKEI+FDRG+K YHGRIKELA+GAR+ GL+F
Sbjct:    2 MGKREKKRIKGDGRKPRLAVFRSNKHIYAQVIDDSDSTTITSCSTLEIEVKAKCEKTSNKVASKIVGEIIGTRLLEQDIKEIVFDRGQKSYHGRIKELAEGARLVGLNF 110          
BLAST of mRNA_H-paniculata_contig2119.5550.1 vs. uniprot
Match: D1GJR7_FUCVE (50S ribosomal protein L18, chloroplastic n=3 Tax=Fucaceae TaxID=3010 RepID=D1GJR7_FUCVE)

HSP 1 Score: 165 bits (417), Expect = 7.180e-51
Identity = 84/109 (77.06%), Postives = 95/109 (87.16%), Query Frame = 0
Query:    1 MGKREKKRIKGTESKPRLSIYRSNKHIYVQVIDDSSSKTIASCSTLEMEVKAKCEKTATKLASKIVGELIGTRLRAKNIKEIIFDRGKKPYHGRIKELADGARIGGLSF 109
            MGKREKK+IKG   KPRLSIYRSNKHIY QVIDDSSSKTI SCSTLE+EVK+KC  T+ KLASK+VGE+I TRL  ++I EIIFDRGKKPYHGRIKELA+ AR+ GL+F
Sbjct:    1 MGKREKKKIKGNNLKPRLSIYRSNKHIYAQVIDDSSSKTIISCSTLELEVKSKCLNTSNKLASKVVGEIIETRLLKEDINEIIFDRGKKPYHGRIKELAEAARLKGLNF 109          
BLAST of mRNA_H-paniculata_contig2119.5550.1 vs. uniprot
Match: A0A2I4Q2I8_9PHAE (50S ribosomal protein L18, chloroplastic n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A2I4Q2I8_9PHAE)

HSP 1 Score: 160 bits (406), Expect = 3.410e-49
Identity = 78/109 (71.56%), Postives = 96/109 (88.07%), Query Frame = 0
Query:    1 MGKREKKRIKGTESKPRLSIYRSNKHIYVQVIDDSSSKTIASCSTLEMEVKAKCEKTATKLASKIVGELIGTRLRAKNIKEIIFDRGKKPYHGRIKELADGARIGGLSF 109
            MGKR+KK IKGT SKPRL++YRSN HIY QVIDDS SKT+ SCSTL++++K KC+KTA K+ASK+VGE+IGT+L  K+I+EIIFDRGK+PYHGRIKELA+GAR  G+ F
Sbjct:    1 MGKRDKKIIKGTGSKPRLAVYRSNNHIYAQVIDDSCSKTMLSCSTLDVQIKIKCQKTANKIASKMVGEIIGTKLLEKDIQEIIFDRGKRPYHGRIKELAEGARFVGVKF 109          
BLAST of mRNA_H-paniculata_contig2119.5550.1 vs. uniprot
Match: A0A6B7EYI1_9PHAE (50S ribosomal protein L18 n=1 Tax=Cladosiphon okamuranus TaxID=309737 RepID=A0A6B7EYI1_9PHAE)

HSP 1 Score: 160 bits (405), Expect = 4.850e-49
Identity = 80/109 (73.39%), Postives = 94/109 (86.24%), Query Frame = 0
Query:    1 MGKREKKRIKGTESKPRLSIYRSNKHIYVQVIDDSSSKTIASCSTLEMEVKAKCEKTATKLASKIVGELIGTRLRAKNIKEIIFDRGKKPYHGRIKELADGARIGGLSF 109
            MGKREKKRIKG + KPRLS++RSN HIY QVIDDS+S TI SCSTLE EVKAKCEKT+ K AS+IVGE+IG+RL  +NI +I+FDRGKK YHGRIKE+A+GAR+ GL F
Sbjct:    1 MGKREKKRIKGNKLKPRLSVFRSNNHIYAQVIDDSASITITSCSTLETEVKAKCEKTSNKPASRIVGEIIGSRLLEQNINQIVFDRGKKTYHGRIKEVAEGARLAGLCF 109          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2119.5550.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8F0F787_9PHAE7.860e-6493.58Ribosomal protein L18 n=1 Tax=Protohalopteris sp. ... [more]
A0A8F0JZH3_9PHAE6.420e-5480.73Ribosomal protein L18 n=1 Tax=Desmarestia aculeata... [more]
D1J737_ECTSI5.270e-5379.8250S ribosomal protein L18 n=1 Tax=Ectocarpus silic... [more]
A0A0R6M4V6_UNDPI2.150e-5278.9050S ribosomal protein L18, chloroplastic n=28 Tax=... [more]
A0A1I9LVY4_9PHAE1.760e-5177.0650S ribosomal protein L18, chloroplastic n=1 Tax=P... [more]
A0A8F0JYJ6_9PHAE1.760e-5177.98Ribosomal protein L18 n=1 Tax=Chorda asiatica TaxI... [more]
A0A7T8JK65_SCYLO3.670e-5176.1550S ribosomal protein L18, chloroplastic n=5 Tax=S... [more]
D1GJR7_FUCVE7.180e-5177.0650S ribosomal protein L18, chloroplastic n=3 Tax=F... [more]
A0A2I4Q2I8_9PHAE3.410e-4971.5650S ribosomal protein L18, chloroplastic n=1 Tax=D... [more]
A0A6B7EYI1_9PHAE4.850e-4973.3950S ribosomal protein L18 n=1 Tax=Cladosiphon okam... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005484Ribosomal protein L18PFAMPF00861Ribosomal_L18pcoord: 3..109
e-value: 1.0E-36
score: 125.9
IPR005484Ribosomal protein L18PANTHERPTHR1289939S RIBOSOMAL PROTEIN L18, MITOCHONDRIALcoord: 4..109
NoneNo IPR availableGENE3D3.30.420.100coord: 2..109
e-value: 1.6E-37
score: 130.5
NoneNo IPR availablePANTHERPTHR12899:SF339S RIBOSOMAL PROTEIN L18, MITOCHONDRIALcoord: 4..109
NoneNo IPR availableSUPERFAMILY53137Translational machinery componentscoord: 3..107
IPR004389Ribosomal protein L18, bacterial-typeTIGRFAMTIGR00060TIGR00060coord: 3..109
e-value: 1.4E-32
score: 110.4
IPR004389Ribosomal protein L18, bacterial-typeHAMAPMF_01337_BRibosomal_L18_Bcoord: 3..109
score: 22.365

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2119contigH-paniculata_contig2119:22018..22347 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2119.5550.1mRNA_H-paniculata_contig2119.5550.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2119 22018..22347 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2119.5550.1 ID=prot_H-paniculata_contig2119.5550.1|Name=mRNA_H-paniculata_contig2119.5550.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=110bp
MGKREKKRIKGTESKPRLSIYRSNKHIYVQVIDDSSSKTIASCSTLEMEV
KAKCEKTATKLASKIVGELIGTRLRAKNIKEIIFDRGKKPYHGRIKELAD
GARIGGLSF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005484Ribosomal_L18
IPR004389Ribosomal_L18_bac-type