mRNA_H-paniculata_contig10867.554.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig10867.554.1 vs. uniprot
Match: D7FWQ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWQ3_ECTSI) HSP 1 Score: 199 bits (506), Expect = 3.430e-53 Identity = 115/309 (37.22%), Postives = 172/309 (55.66%), Query Frame = 2 Query: 203 NKCWVFLHLERNGGTTIKKILYRRWKIAYDFYDNDQWQGGDVIAAKYAERLLVDRQLRVIAGEHAEGLRSM--VGDRCKWFTVFRHPVSQLVSAYFYCKQRPHKLGCAYEHSDKREEDLVMFAKHRGNLSFQQFMLNYVTFSELIDDAV---EASSVEEFGGLQTGPGWNILKRYLKRLPK-----------------------AAVRDMLPPMKKVLHNNYTAVGILEQFDETLELFNRALEMPNLEWKKWFHNSNIQMKNLQYHIQEHELLTDPLIYSKVKKYIELDLSLYEHAVTTFNHQKEVYGI 1045 ++CWVF+HL++ GG+T+K +L R + Y YD++QW+ GD I+A + +L V+AG + E LR V C++FT+FRHP++++VSAYFYC+ CA E D ++ DL+ FAKH GN + +QF L +V S+ + + + EA ++ +F L+ GW LK YL+R K A + D+L P ++ + Y AVGILEQ++ TL LF+ ALE+P + W F Q + + E E L S++KKY+ LDL LYEHAV F+ Q YG+ Sbjct: 154 DQCWVFMHLQKCGGSTVKYMLRRSYGSRYSIYDSNQWKLGDDISANFGVKLARGETWNVMAGGYTEALRRSEPVDAGCRFFTLFRHPIARMVSAYFYCRSTLGDAACASEVVDAKDVDLLTFAKHWGNFAVRQFALGFVP-SDGVQEYIRTPEAQALHDFD-LKKIAGWYQLKMYLERPEKGDWGVPGQSEAMTVEHDAAATLEAPLYDLLQPAMDLIRSGYVAVGILEQWNTTLHLFDHALEIPGMYWGAQFAEGGKQRVDYKNKRLESETLKQAWTDSELKKYMRLDLLLYEHAVDVFHEQARGYGL 460
BLAST of mRNA_H-paniculata_contig10867.554.1 vs. uniprot
Match: D7G715_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G715_ECTSI) HSP 1 Score: 194 bits (494), Expect = 3.850e-52 Identity = 109/303 (35.97%), Postives = 162/303 (53.47%), Query Frame = 2 Query: 203 NKCWVFLHLERNGGTTIKKILYRRWKIAYDFYDNDQWQGGDVIAAKYAERLLVDRQLRVIAGEHAEGLRSMVGDR-------CKWFTVFRHPVSQLVSAYFYCKQRPHKLGCAYEHSDKREEDLVMFAKHRGNLSFQQFMLNYVTFSELIDDAVEASSVEEFG----GLQTGPGWNILKRYLKRLPKAAVRD-----------MLPPMKKVLHNNYTAVGILEQFDETLELFNRALEMPNLEWKKWFHNSNIQMKNLQYHIQEHELLTDPLIYSKVKKYIELDLSLYEHAVTTFNHQKEVYGI 1045 N+CW+F HL++ GGTT+K++L+ W YD+ QW+ G A A L AG + E LR + C+WFTVFRHPVS+LVSAY+YC++ P CA E R DLV FA+H GN + +QF L +V+ ++ D V + G ++ PGW +LK +L ++ V D M P+ +L +NY VGILE ++ TL LF+ AL+MP + W++ F S + ++ ++ ++L L ++ K++ LDL LY AV FN Q+ YGI Sbjct: 86 NRCWIFNHLQKAGGTTVKRLLFDSWGSESTTYDSYQWKKGQGYAESVAASLASPAGWSAAAGGYLEALRRTPAFQPDDERTPCRWFTVFRHPVSRLVSAYYYCREDPSDQLCASEFVSSRNVDLVTFARHWGNFALRQFALGFVSHDKVKDFLVSPNGGGAMGLTAEQVELMPGWYMLKLFLN--DRSGVADDTSPEGTRLEYMFRPVVDLLRDNYAVVGILEDWNATLSLFDSALDMPGMTWREEFERSGKLNVDTRFKGEKQDVLQQALSDPEIVKHLSLDLRLYGQAVDIFNQQRHSYGI 386
BLAST of mRNA_H-paniculata_contig10867.554.1 vs. uniprot
Match: D7G716_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G716_ECTSI) HSP 1 Score: 190 bits (483), Expect = 6.020e-50 Identity = 103/288 (35.76%), Postives = 166/288 (57.64%), Query Frame = 2 Query: 206 KCWVFLHLERNGGTTIKKILYRRWKIAYDFYDNDQWQGGDVIAAKYAERLLVDRQLRVIAGEHAEGLR--SMVGDRCKWFTVFRHPVSQLVSAYFYCKQRPHKLGCAYEHSDKREEDLVMFAKHRGNLSFQQFMLNYVTFSELIDDAVEA---SSVEEFGGLQTGPGWNILKRYLKRLPKAAVRDMLPPMKKVLHNNYTAVGILEQFDETLELFNRALEMPNLEWKKWFHNS---NIQMKNLQYHIQEHELLTDPLIYSKVKKYIELDLSLYEHAVTTFNHQKEVYGI 1045 +CWVF+HL++ GG+T+K +L RW + YD+ +W+ GD +AK+ +L + + V+ G + E LR VG C++FT+FRHP++++VSAYFYC+ + CA E ++ DL+ FAKH GN + +QF L +V ++ + ++ +E GG+ + P A + ++L P ++ + Y AVGILEQ++ TL LF+ L+MP + W++ F S ++ + N Q I E L S++KKY+ LDL LYEHAV F+ Q +G+ Sbjct: 176 QCWVFMHLQKCGGSTVKDLLEDRWGSRFFIYDSMRWKFGDEFSAKFGAKLALGDKWNVMTGGYTEALRLSEPVGAGCRFFTLFRHPIARMVSAYFYCRSVSGDVACASEVMQAKDVDLLTFAKHWGNFALRQFALGFVPSDDVQEYQLKMYLERPQKEDGGVLGQREAMTAHQDAAATPDAPLYELLQPAMDLVRDGYVAVGILEQWNTTLRLFDHTLDMPVMNWEEQFAESGKHHVDIVNKQLEI---ETLQQAWTDSELKKYMRLDLLLYEHAVDVFHQQARSHGL 460
BLAST of mRNA_H-paniculata_contig10867.554.1 vs. uniprot
Match: D7FS84_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FS84_ECTSI) HSP 1 Score: 162 bits (410), Expect = 2.420e-41 Identity = 100/305 (32.79%), Postives = 160/305 (52.46%), Query Frame = 2 Query: 227 LERNGGTTIKKILY---RRWKIAYDFYDNDQWQGGDVIAAKYAERLLVDRQLRVIAGEHAEGLRSMVG---DRCKWFTVFRHPVSQLVSAYFYCKQRPHKLGCAYEHSDKREED--LVMFAKHRGNLSFQQFMLNYVTFSELIDDAVEASSV---EEFGGLQTGPGWNILKRYLKRL---------------------PKAAVRDMLPPMKKVLHNNYTAVGILEQFDETLELFNRALEMPNLEWKKWFHNSNIQMKNLQYHIQEHELLTDPLIYSKVKKYIELDLSLYEHAVTTFNHQKEVYGI 1045 + + GG+T+K +L + + YD+ QW G +A+ L D ++ G + EGLR G CKWFT+FRHP+ +LVSAYFYCK++P CA D +D L FA+H G+ +QF L +V EL+ + V+ + + G ++ PGW LK YL++ A + +L P++++L N Y AVG+LEQ++ +L LFN AL MP +W + F + + + +H +E E+L ++++Y+ LDL LY++AV+ N Q + YG+ Sbjct: 1 MNKAGGSTVKYMLAPWTKAQNVTVGLYDSPQWLEGK----DFAQDFLGDEN-SLMWGAYTEGLRPFGGLGLRECKWFTIFRHPIPRLVSAYFYCKKKPQDGLCATVALDANADDTDLYAFAEHWGDFGLRQFALAFVLPEELLANKVKYDATGICTPYHGKRSCPGWYELKLYLQQQLDEQEQGEGSRGWDGSGAAASGAATISHLLQPVQELLTNEYAAVGVLEQWETSLLLFNEALGMPGFDWPETFGSIGKKNSDGTFHNEEAEMLLRSWTDPRLRRYLSLDLLLYDYAVSVHNQQVDKYGL 300
BLAST of mRNA_H-paniculata_contig10867.554.1 vs. uniprot
Match: A0A6H5JY77_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY77_9PHAE) HSP 1 Score: 154 bits (390), Expect = 3.680e-38 Identity = 97/296 (32.77%), Postives = 149/296 (50.34%), Query Frame = 2 Query: 209 CWVFLHLERNGGTTIKKILY---RRWKIAYDFYDNDQWQGGDVIAAKYAERLLVDRQLRVIAGEHAEGLRSMVGDR-CKWFTVFRHPVSQLVSAYFYCKQRPHKLGCAYEHSDKREEDLVMFAKHRGNLSFQQFMLNYVTFSELIDDAVEASSVEEFGGLQTG--PGWNILKRYLK----------RLPKAAVRDMLPPMKKVLHNNYTAVGILEQFDETLELFNRALEMPNLEWKKWFHNSNIQMKN-LQYHIQEHELLTDPLIYSKVKKYIELDLSLYEHAVTTFNHQKEVYGI 1045 CWVF H+ ++GG T++K++ ++ +D+ +W G YAE + + + G + EGLR M DR CKWFTVFRHPVS++VSAYFYC++ H CA D + DL+ FA+H GN +QF L + ++ + V + ++ G P W K YL P++ + L ++ L Y AVGI+E++D ++ELFNR L + +W K F S + Q+ L ++KK+I LD+ LY+HA++ Q GI Sbjct: 52 CWVFSHMNKSGGMTVRKMIMPFLTEKGVSTALFDDIEWSSG----RSYAETFVKENAVFTYGG-YTEGLR-MYDDRDCKWFTVFRHPVSRVVSAYFYCQRAHHDQLCAAVVLDASKVDLLTFAEHWGNYGLRQFALASIKAEDVFHNEVVSEFCQQARGHGDVCIPAWYRQKHYLHLPHQDDFCGPTQPESGLAQFLSSAQETLSTRYAAVGIIEEWDNSMELFNRVLNLRRFDWVKEFQKSGKKNSGGSQFETASKSALKAAWHSPELKKFIWLDILLYDHALSVHRSQVADLGI 341
BLAST of mRNA_H-paniculata_contig10867.554.1 vs. uniprot
Match: A0A6H5JNJ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNJ0_9PHAE) HSP 1 Score: 136 bits (343), Expect = 6.150e-32 Identity = 98/308 (31.82%), Postives = 150/308 (48.70%), Query Frame = 2 Query: 209 CWVFLHLERNGGTTIKKILY-----RRWKIAYDFYDNDQWQGGDVIAAKYAERLLVDRQLRVIAGEHAEGLRSMVGDRCKWFTVFRHPVSQLVSAYFYCKQRPHKLGCAYEHSDKREEDLVMFAKHRGNLSFQQFMLNYVTFSELIDDAVEASSVEEFGGLQTGPGWNILKRYLK-------RLPKAAVR------------DMLPPMKKVLHNNYTAVGILEQFDETLELFNRALEMPNLEWKKWFHNSNIQMKNLQYHIQEHELL-----TDPLIYSKVKKYIELDLSLYEHAVTTFNHQKEVYGI 1045 CWVF H + GGTT+K L R +A +D + GD K + LL D+ + +IAG +AEGLR+ CKWFT+ RHP+++L+SA++YC CA + D+ FAKH GN + QF L V E+ + V+A P W K Y + + A R D+L P++++L +NY AVGILE + ++ LF+ ALE+P W ++++ + Q I E + + TDP++ ++Y+ LDL LYE+A + Q Y + Sbjct: 37 CWVFTHNNKAGGTTVKTHLRNYAESRNETVA--LCHSDWYARGD----KGIQDLLNDKPV-LIAGGYAEGLRTSAFQGCKWFTMMRHPIARLISAFYYCSGGNRDQLCAANIHKPEDGDIYDFAKHWGNYALLQFALGVVDQHEIFAEEVDA------------PAWFKAKLYFEGRLGYPGNMSTATNRTTHDEWQSVWIPDILQPVEELLRSNYAAVGILEHWQRSMMLFDHALEIPGFNWT--VASASLSPRKSQNKIVEKKAMLAAAMTDPVL----RQYVWLDLLLYEYACSLHEEQLRRYDL 319
BLAST of mRNA_H-paniculata_contig10867.554.1 vs. uniprot
Match: A0A6H5JQY7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQY7_9PHAE) HSP 1 Score: 120 bits (302), Expect = 1.860e-26 Identity = 85/305 (27.87%), Postives = 153/305 (50.16%), Query Frame = 2 Query: 209 CWVFLHLERNGGTTIKKILYRRWKIAYDF----YDNDQWQGGDVIAAKYAERLLVDRQLRVIAGEHAEGLR---SMVGDRCKWFTVFRHPVSQLVSAYFYCKQRPHKLGCAYEHSDKREEDLVMFAKHRGNLSFQQFMLNYVTFSELIDDAVEASSVEEFGGLQTGPGWNILKRYLK-RLPKAA------------------VRDMLPPMKKVLHNNYTAVGILEQFDETLELFNRALEMPNLEWKKWFHNSNIQMKNLQYHIQEHELLTDPLIYSKVKKYIELDLSLYEHAVTTFNHQKEVYGI 1045 CWV+ + + GGT+I++++ + + A + + + Q+ GD + ++DR+ +I G + EGLR +++G CKWFT+ RHP+++LVSA+ YC P CA + D+ FA+H GN QF L + ++++ V++ P W K Y + RL + + ++L P++++L + Y AVGILEQ++ ++ LF+ AL++P W +S +N+ +++LL + +K+ + LD+ LYEHA + Q YG+ Sbjct: 37 CWVYTDMNKAGGTSIRRMI-KDYAAATNTTVGEFTHTQYNAGD-----RGVQQILDRRPSLIWGAYTEGLRPYATVLG--CKWFTMVRHPIARLVSAFNYCGIVPSDQLCATRIHKPEDGDIYDFAEHWGNHGVVQFALAFEDLNDILVTEVKS------------PPWYKAKLYFEGRLGPSGKTSTSANISTKDVCQNVWMPEILQPVEELLRSKYAAVGILEQWETSMMLFDHALQLPGFNWTSTSASST--PRNVHDSKAKNDLLVASMTDPVLKQILWLDILLYEHACSVHKAQLSRYGL 319
BLAST of mRNA_H-paniculata_contig10867.554.1 vs. uniprot
Match: A0A6H5L061_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L061_9PHAE) HSP 1 Score: 100 bits (250), Expect = 2.250e-20 Identity = 69/220 (31.36%), Postives = 109/220 (49.55%), Query Frame = 2 Query: 446 FRHPVSQLVSAYFYCKQRPHKLGCAYEHSDKREEDLVMFAKHRGNLSFQQFMLNYVTFSELIDDAVEASSVEEFGGLQTGP----GWNILKRYLKRL-----PKAAVRD-----------MLPPMKKVLHNNYTAVGILEQFDETLELFNRALEMPNLEWKKWFHNSNIQMKNLQYHIQEHELLTDPLIYSKVKKYIELDLSLYEHAVTTFNHQKEVYGI 1045 ++ P+ +LVSAYFYCKQ CA DL FAKH GN +QF L +V A + + E+ G+ P GW +K Y + +A +++ +L P++ +L NY+AVGILE+++ ++ LFN+AL++P+ W+ N + + + H +E L + K + LD+ LY+HAV N Q E +GI Sbjct: 18 YKCPIPRLVSAYFYCKQNGWDELCASMVLKAGNTDLHTFAKHWGNYGLRQFSLAFV-------GAEDVFAAEQERGIDGRPVMFPGWYRVKEYFENQFDVEQERALMQETGASNDLAMSYLLQPVEDLLSRNYSAVGILEKWETSMTLFNKALKVPSFNWQTASRNLGRKNVDKRLHDEEAHALRAAWDDPVLAKTLWLDIFLYDHAVAVHNKQVEEHGI 230
BLAST of mRNA_H-paniculata_contig10867.554.1 vs. uniprot
Match: A0A6H5JT32_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT32_9PHAE) HSP 1 Score: 82.8 bits (203), Expect = 3.400e-13 Identity = 77/288 (26.74%), Postives = 129/288 (44.79%), Query Frame = 2 Query: 209 CWVFLHLERNGGTTIKKILYRRWKIAYDFYDNDQWQGGDVIAAKYAERLLVDRQLRVIAGEHAEGLR---SMVGDRCKWFTVFRHPVSQLVSAYFYC------KQRPHKLGCAYEHSDKREED-LVMFAKHRG-NLSFQQFMLNYV----TFSELIDDAVEASSVEEFGGLQTGPGWNILKRYLKRLPKAAVRDMLPPMKKVLHNNYTAVGILEQFDETLELFNRALEMPNLEWKKWFHNSNIQMKNLQYHIQEHELLTDPLIYSKVKKYIELDLSLYEHAVTTFNHQ 1027 C +F H+ ++GG+TIK L K D V Y + L + +AE LR ++G C++FTV RHP+ +L+SA+FYC + RP K C Y + + D LV FAK+ N +F+Q F E + + +V E GG W +L++ + + YTAVGILE +D +++LFN + P +W+ H++ Q L+ + ++ ++ + + D+ LY+++V+ F Q Sbjct: 128 CTLFNHMVKSGGSTIKDKLDIAAKA-----DGVDGPAMCVNGVGYEDSCLKAMHSAPVIVGYAELLRYPLEVIGRECEYFTVMRHPIDRLLSAFFYCPAYGDVQDRPPK-WCGYANDPQPVTDRLVEFAKYGWKNKAFRQMTFGLYCPPNAFCEQAEPGAQ-QAVHEPGG------WILLEQI-----------------EAILATYTAVGILEYWDLSMQLFNARVTSPVWDWEDMEHSNRGQRSGLRDEVHRWAHMSP-----EIHRVMATDMLLYDYSVSVFKLQ 380
BLAST of mRNA_H-paniculata_contig10867.554.1 vs. uniprot
Match: A0A6H5JT23_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT23_9PHAE) HSP 1 Score: 80.5 bits (197), Expect = 8.560e-13 Identity = 81/296 (27.36%), Postives = 129/296 (43.58%), Query Frame = 2 Query: 209 CWVFLHLERNGGTTIKKILYRRWKIAYDFYDNDQWQGG-------------DVIAAKYAERLLVDRQLRVIAGEHAEGLRSMVGDRCKWFTVFRHPVSQLVSAYFYC------KQRPHKLGCAYEHSDKREED-LVMFAK-HRGNLSFQQFMLNYVTFSELIDDAVEASSVEEFGGLQTGPGWNILKRYLKRLPKAAVRDMLPPMKKVLHNNYTAVGILEQFDETLELFNRALEMPNLEWKKWFHNSNIQMKNLQYHIQE--HELLTDPLIYSKVKKYIELDLSLYEHAVTTFNHQ 1027 C VF H+ ++GG+TIK L+ + A GG + YAE + D L + + C++FT+ RHPV +LVSA+FYC + RP K C Y D L+ FA+ H N++++Q LI EA+ VE GL G ++L++ V D+L + YTAVGI+E +D +++LFN + P +W ++ L+ + + H+ P+I+ + + DL LY A++ F Q Sbjct: 41 CTVFHHMVKSGGSTIKHNLHISSRAAGGPRPGSCVAGGGKRINSCKEAFNSSAVIMGYAELMRQDGPLEAVRRD------------CEYFTLLRHPVDRLVSAFFYCPTDHDLQLRPPK-WCGYADDPLPATDRLLEFAQQHWKNMAYKQMTFGMYCPHGLI---CEATEVETAPGLDEPHGLDVLQK---------VEDIL--------SGYTAVGIMEHWDLSMQLFNARVRSPVRDWNMTVRSNAGLPSELRDEVLQWAHD---SPVIH----RLMATDLLLYSFALSIFKRQ 296 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig10867.554.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig10867.554.1 >prot_H-paniculata_contig10867.554.1 ID=prot_H-paniculata_contig10867.554.1|Name=mRNA_H-paniculata_contig10867.554.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=333bp MGVLSLPPRRRALFLLFGFVFLSSSMKQLVTPALASELHEDSQHALDAGVback to top mRNA from alignment at H-paniculata_contig10867:3638..5640+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig10867.554.1 ID=mRNA_H-paniculata_contig10867.554.1|Name=mRNA_H-paniculata_contig10867.554.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2003bp|location=Sequence derived from alignment at H-paniculata_contig10867:3638..5640+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig10867:3638..5640+ >mRNA_H-paniculata_contig10867.554.1 ID=mRNA_H-paniculata_contig10867.554.1|Name=mRNA_H-paniculata_contig10867.554.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1998bp|location=Sequence derived from alignment at H-paniculata_contig10867:3638..5640+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |