prot_H-paniculata_contig21159.5537.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig21159.5537.1
Unique Nameprot_H-paniculata_contig21159.5537.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length127
Homology
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BLAST of mRNA_H-paniculata_contig21159.5537.1 vs. uniprot
Match: D8LNZ3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNZ3_ECTSI)

HSP 1 Score: 57.0 bits (136), Expect = 5.820e-8
Identity = 40/118 (33.90%), Postives = 66/118 (55.93%), Query Frame = 0 
Query:   10 SLAWLMACFVASLFVGMAQGKSGASSAEAYDTEAILSRAWTQSSELASATWGNTLEYVGVQ-SSMVYMALLGTVAVALLVCTLYVISRITDKDPYLYNKGKLGRLERQSVYNTSKKSC 126
            S A ++AC +A+   G+     G +++   +T   ++ A      +A+A     LE  G +  S + + +LG +  AL+  TLY+     D+DPY++N GK+G+LE QSVY T+KK C
Sbjct:    7 SAAVMVACLIATFLAGL----HGVNASTGGETSGFMAFA----EGIATAARDKILECSGAEPDSHLPLIVLGAMGAALVAFTLYLTRLFFDRDPYVFNGGKMGKLEAQSVY-TNKKRC 115
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BLAST of mRNA_H-paniculata_contig21159.5537.1 vs. uniprot
Match: A0A7S2RYK7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RYK7_9STRA)

HSP 1 Score: 50.4 bits (119), Expect = 2.950e-5
Identity = 34/111 (30.63%), Postives = 60/111 (54.05%), Query Frame = 0 
Query:   10 SLAWLMACFVASLFVGMAQGKSGASSAEAYDTEAILSRAWTQSSELASATWGNTLEYVGVQSSMVYMALLGTVAVALLVCT-LYVISRITDKDPYLYNKGKLGRLERQSVY 119
            ++  L +   A+  + +AQ    +S + A D  +++SR  + +    ++ +   LE         Y++L G +A  +L C  L+V S+I D  P+LYN GKLG LE+QS++
Sbjct:    8 AMTTLRSIVTAAAVLAVAQAARFSSQSTAQDAPSLVSRVLSST----ASPFAKALELYNSTIVARYLSLPGLLAACVLTCVILWVTSKILDPTPFLYNDGKLGPLEKQSIF 114
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig21159.5537.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LNZ3_ECTSI5.820e-833.90Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2RYK7_9STRA2.950e-530.63Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 21..38
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 73..94
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..38
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 39..72
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 95..126
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..17
score: 5.0
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..29
score: 0.88
NoneNo IPR availableTMHMMTMhelixcoord: 7..29
NoneNo IPR availableTMHMMTMhelixcoord: 73..95
IPR023352Membrane associated eicosanoid/glutathione metabolism-like domain superfamilySUPERFAMILY161084MAPEG domain-likecoord: 8..97

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig21159contigH-paniculata_contig21159:2527..3303 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig21159.5537.1mRNA_H-paniculata_contig21159.5537.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig21159 1256..3559 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig21159.5537.1 ID=prot_H-paniculata_contig21159.5537.1|Name=mRNA_H-paniculata_contig21159.5537.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=127bp
MAQQHRFFFSLAWLMACFVASLFVGMAQGKSGASSAEAYDTEAILSRAWT
QSSELASATWGNTLEYVGVQSSMVYMALLGTVAVALLVCTLYVISRITDK
DPYLYNKGKLGRLERQSVYNTSKKSC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023352MAPEG-like_dom_sf