prot_H-paniculata_contig21158.5536.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig21158.5536.1
Unique Nameprot_H-paniculata_contig21158.5536.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length600
Homology
[Close]
BLAST of mRNA_H-paniculata_contig21158.5536.1 vs. uniprot
Match: D8LG60_ECTSI (Histone deactylase of possible bacterial origin with ankyrin repeats at the N-terminus n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG60_ECTSI)

HSP 1 Score: 67.8 bits (164), Expect = 5.610e-8
Identity = 57/150 (38.00%), Postives = 68/150 (45.33%), Query Frame = 0 
Query:  407 MSPSAVQAIHQISKLRDAQYGIGPG-DSP------------------VHDQTSGYSSDEADGVLGAGR-QGWTSAHRGGAFSLGSRTGAAHPQSS-----------------------------SVDPGRANLGQLAAKAQEEDKMNHVR 507
            MSPSA+QAI QISKLRDAQY  G G D P                  +     GY S +     GAGR QGW SAHRGGA+SL     +++P+S+                             + D  RA LGQLAAK Q E+K    R
Sbjct:  434 MSPSALQAIKQISKLRDAQYLSGRGRDKPSTSDEEQEPVLPMGPTPELAPAAGGYESSDGGHTGGAGRGQGWRSAHRGGAYSLSLNNNSSNPRSAGGAXXXXXXXXXXXXXXXXXXXXXXGQDAAKDSSRATLGQLAAKVQAEEKSRRTR 583
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig21158.5536.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LG60_ECTSI5.610e-838.00Histone deactylase of possible bacterial origin wi... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig21158contigH-paniculata_contig21158:311..4193 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig21158.5536.1mRNA_H-paniculata_contig21158.5536.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig21158 311..4194 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig21158.5536.1 ID=prot_H-paniculata_contig21158.5536.1|Name=mRNA_H-paniculata_contig21158.5536.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=600bp
HVVPPPGAPASYAGEQGAGGAGANAQTAAFRSGVAAQLAKKQSTSASVIA
AAIAQDEKARVAAAAAALAAREFAAKQAAVHAAGGVSTMHGTGPTIPIPV
APSTSSLPVALAEGAPLHLRQFSPAPAPTAGSTAGLPIGSNSSAAAAAAA
AAMAIATSGIIGLSGSSIAAATTATLGNSTTGSGGGMACTLFSNTKAITT
TEGVPAAPQQQQQQQARPGVYYNTPSGGGSGQPQQQQQQPGSSSHPATTS
AMFQPAYPAATPTAAAAATAAAAAAAAAAVGIYGAQVSTTTAAPNAAAPL
TGTTWESQSSPQVNSNGAGGPIAAAGGLINVGLPAVSGSAPRGAKPAPGV
SGPVSAPGGHGSAAAQQQENEGYSQAMALAGGGVGAGGESALAAGAVARR
GAARDIMSPSAVQAIHQISKLRDAQYGIGPGDSPVHDQTSGYSSDEADGV
LGAGRQGWTSAHRGGAFSLGSRTGAAHPQSSSVDPGRANLGQLAAKAQEE
DKMNHVRMVDMVAAATNAGAAGMPGIQGGENAMDANGIPVLGAAAGPGPT
GASATAAAAAGGGGSGGSGGGGSSSGGLPGLGASISTTTGTGGGSGGGES
back to top