prot_H-paniculata_contig10863.552.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig10863.552.1
Unique Nameprot_H-paniculata_contig10863.552.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length271
Homology
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BLAST of mRNA_H-paniculata_contig10863.552.1 vs. uniprot
Match: D7G3K7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3K7_ECTSI)

HSP 1 Score: 201 bits (512), Expect = 2.200e-57
Identity = 115/227 (50.66%), Postives = 139/227 (61.23%), Query Frame = 0 
Query:    1 TFRLKIHIYEAHLGL---------TQGNKEEQIDASSHAG-WDTIASVYLPNDPAGERHDTIRARKSRNPVWNQSVMFEDIDFSDHVRLEVLGMRKLGENPVLARLDFEVHDVMGLDLRNSASLFQLECDRVRVRYGVILLAFEFDPPVAADVLVALNG---------------------ETTVRWG-----EESPRSPPVEVDYPVYVNVSENFACLLLDDDEPQN 191
            TF L I+IYEAHLG+         T G            G WDT   V LP DP GERH+T RA K+ NPVW+Q+V+  DI++S+ VR+E+   RK+GENPVLA ++FEVHDV+GL LR  AS+FQLECDR R RYG+ILLAF FDPPVAADVL AL+G                     E    WG     +++ R   VEV  PVY+NV  +FACLLLDDD P N
Sbjct:   18 TFTLTIYIYEAHLGVNSSISNNSSTGGPXXXXXXXXXGGGPWDTKIVVSLPKDPMGERHETGRAGKTSNPVWDQAVVLRDIEYSELVRVEMRRPRKIGENPVLASVEFEVHDVIGLSLREGASVFQLECDRSRARYGIILLAFRFDPPVAADVLGALDGVGLASLPRGVTTPADQGHDEGEKAPAWGAPEAGQQAERE--VEVAEPVYINVEGHFACLLLDDDTPLN 242
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BLAST of mRNA_H-paniculata_contig10863.552.1 vs. uniprot
Match: A0A7S2BYM4_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BYM4_9STRA)

HSP 1 Score: 109 bits (272), Expect = 1.200e-25
Identity = 63/185 (34.05%), Postives = 98/185 (52.97%), Query Frame = 0 
Query:    1 TFRLKIHIYEAHLGLTQGNKEEQIDASSHAGWDTIASVYLPNDPAGERHDTIRARKSRNPVWNQSVMFEDIDFSDHVRLEVLGMRKLGENPVLARLDFEVHDVMGLDLRNSASLFQLECDRVRVRYGVILLAFEFDPPVAADVLVALNGETTVRWGEESPRSPPVEVDYPVYVNVSENFACLLLD 185
            T+RL IH +EA L + + +K     A      D    V+L  D  G +  T   +KS +PVWNQS++F ++++SD +R+E+   R+   N  L   DF V DVM   ++     ++L  ++V    G +L AF+FDPPV  D+      E       E+  +   EV+  VY+NV  NF+C+L+D
Sbjct:   18 TYRLTIHFFEAQLQVAENSKANPQGAML----DPYVVVFLTRDREGSKQKTSVQKKSLSPVWNQSLVFNELNYSDKLRVEIKANRQFQVNDFLCGFDFIVADVMAQSVQECQPSYRLVGEKVT---GTLLAAFDFDPPVPLDI------EPPPAAPIEATSAGEEEVEEKVYLNVERNFSCMLID 189
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig10863.552.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G3K7_ECTSI2.200e-5750.66Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2BYM4_9STRA1.200e-2534.05Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000008C2 domainSMARTSM00239C2_3ccoord: 3..112
e-value: 0.0026
score: 27.0
IPR000008C2 domainPFAMPF00168C2coord: 3..102
e-value: 2.2E-5
score: 24.7
IPR000008C2 domainPROSITEPS50004C2coord: 1..97
score: 10.397
IPR035892C2 domain superfamilyGENE3D2.60.40.150coord: 1..118
e-value: 1.8E-7
score: 33.0
NoneNo IPR availableSUPERFAMILY49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 4..138

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig10863contigH-paniculata_contig10863:1452..5121 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig10863.552.1mRNA_H-paniculata_contig10863.552.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig10863 1452..5122 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig10863.552.1 ID=prot_H-paniculata_contig10863.552.1|Name=mRNA_H-paniculata_contig10863.552.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=271bp
TFRLKIHIYEAHLGLTQGNKEEQIDASSHAGWDTIASVYLPNDPAGERHD
TIRARKSRNPVWNQSVMFEDIDFSDHVRLEVLGMRKLGENPVLARLDFEV
HDVMGLDLRNSASLFQLECDRVRVRYGVILLAFEFDPPVAADVLVALNGE
TTVRWGEESPRSPPVEVDYPVYVNVSENFACLLLDDDEPQNTEFPWRDSK
HSAVARSVNQPSCTTGRPRPSPILAPSRLELPPTTTFEDSQHEWFSRRSQ
NRRESALGPNFAHELSLSMGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000008C2_dom
IPR035892C2_domain_sf