mRNA_H-paniculata_contig21138.5525.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig21138.5525.1 vs. uniprot
Match: D8LTF0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTF0_ECTSI) HSP 1 Score: 348 bits (893), Expect = 3.090e-108 Identity = 217/424 (51.18%), Postives = 254/424 (59.91%), Query Frame = 1
Query: 1 REERLGTFTHPNFVTTVRFHPWNDHVFLTGCFDKRLRLWTVPDGRVANWVQCQDMITAANFSPDGQLTAAGLNDGRVMFYHTTDLRYYTQQIHCRNRRGGNRHGKKVTGLAFVETAQLRHRRQPPGDPSLVPALSAAQGGARGAEDGMMAG--------------GVDVSSVSDGQRRGGKADSMSAQYSLLSTTNDSRLRVYDLDNFAMTSKFKGLLNDGMQIKGSISEDGKFVISGSEDGQVYIWNSKQGPSRRPSGHSVSGVG--------------------PPIGVGGDAAAAAPATARVKSRTSLSFSVQCSARPRIATVAAFVPAAALQSVLKSWDFCDIEMSRRGRGEDEGIIKGNRGWRGSRLRRCSAPVAAESFGEAAGTAVGDGGVGLIHLRRRRWSFAGPGRLGSGGAGGGS 1170
REERLGTFTHP+FVT+V FHP +DH+FLTGCFDKRLRLW +PDGRV +WVQCQDM++AA+FSPDG+L AAGL +GRVMFYHTTDLRYYTQ IHCRNR G R GKKVTGL F+ET++L P GD AA G AG RGGKADSMS+QYSLL+TTNDSRLRVYDLDNFAMTSKFKGL+NDG+QIK S S DG FV+SGSEDGQVY+WNSKQ R+ + SV A PAT VKSRTS SF VQC+ P++AT AAF+P AAL++ + + R D + +G +GWRG P AA + G+A G RRRWSF G R + GAG G+
Sbjct: 437 REERLGTFTHPDFVTSVHFHPLDDHIFLTGCFDKRLRLWKIPDGRVVDWVQCQDMVSAASFSPDGKLAAAGLFNGRVMFYHTTDLRYYTQ-IHCRNRHGSKRRGKKVTGLDFIETSRLH----PCGD--------AAAGXXXXXXXXXXAGCPVAXXXXXXXXXXXXXXXXXXXXHLRGGKADSMSSQYSLLTTTNDSRLRVYDLDNFAMTSKFKGLVNDGIQIKASFSTDGMFVVSGSEDGQVYLWNSKQ--RRQRTARSVPSCNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATTPATL-VKSRTSSSFDVQCATLPQVATAAAFLPTAALEAARLA---AAGGVERDDSAAD--VKRGTKGWRGGVHHSPPMPAAAHATGDAQ---EGXXXXXXXXXXRRRWSFTGHARSVAAGAGAGA 836
BLAST of mRNA_H-paniculata_contig21138.5525.1 vs. uniprot
Match: A0A7S1ZRZ4_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZRZ4_TRICV) HSP 1 Score: 181 bits (458), Expect = 1.970e-49 Identity = 105/248 (42.34%), Postives = 143/248 (57.66%), Query Frame = 1
Query: 1 REERLGTFTHPNFVTTVRFHPWNDHVFLTGCFDKRLRLWTVPDGRVANWVQCQDMITAANFSPDGQLTAAGLNDGRVMFYHTTDLRYYTQQIHCRNRRGGNRHGKKVTGLAFVETAQ---------LRHRRQPPGDPSLVPALSAAQGGARGAEDGMMAGGVDVSSVSDGQRRGGKADSMS----AQYSLLSTTNDSRLRVYDLDNFAMTSKFKGLLNDGMQIKGSISEDGKFVISGSEDGQVYIWNS 705
R L F H +FVT V FHP +D +FL+G FD++LR+W++P+GRV +W Q DMITAA F+PDG + AGL G+V FY LRYYTQ I RNR+G + GKKVTGL+F+ + P P+ A+GG RG ++V GKA S S A+ +L TTNDSRLR+Y ++++ + KFKGL+N +QI+ SE G ++I GSE G V +WN+
Sbjct: 9 RPSCLHVFRHADFVTAVDFHPCDDGLFLSGGFDRKLRVWSIPEGRVRDWAQAPDMITAARFAPDGNMAVAGLFKGQVYFYLAEGLRYYTQ-ISARNRKGKEKMGKKVTGLSFLTGTKEEGXXXXXXXXXXXXXPSSPTRSND-DGAKGGGRGRRTIKSLSPKKGTAVHRAWSGKGKAMSRSPKRRAKDMMLVTTNDSRLRLYGMNDYCIVRKFKGLVNSSLQIRARFSESGNYIICGSETGSVLVWNT 254
BLAST of mRNA_H-paniculata_contig21138.5525.1 vs. uniprot
Match: A0A7S3XNZ4_HETAK (Hypothetical protein n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XNZ4_HETAK) HSP 1 Score: 183 bits (465), Expect = 2.150e-49 Identity = 123/319 (38.56%), Postives = 164/319 (51.41%), Query Frame = 1
Query: 1 REERLGTFTHPNFVTTVRFHPWNDHVFLTGCFDKRLRLWTVPDGRVANWVQCQDMITAANFSPDGQLTAAGLNDGRVMFYHTTDLRYYTQQIHCRNRRGGNRHGKKVTGLAFVETAQLRHRRQPPGDPSLVPALSAAQGGARGAEDGMMAGG----------VDVSSVSDGQRRGGKADSMSAQYSLLSTTNDSRLRVYDLDNFAMTSKFKGLLNDGMQIKGSISEDGKFVISGSEDGQVYIWNSKQGPSRRPSGHSVSGVGPPIGVGGDAAAAAPATARVKSRTSLSFSVQCSARPRIATVAAFVPAAALQSVLKSWD 927
RE+ L F H +FVT V FHP + +F++GC PDGRV W+Q +++TAA F PDG AGL G+++FY T +RYYTQ + CRNR+G R+G+KVTGLAF PPG +AA GG AGG V GG + LL TTNDSRLR+Y +D++ M K+KGL ND MQIK S SED +++I GSE+G+VYIW +++ + G + A P R ++ SF + P IATVA FVPA A++ L+ D
Sbjct: 198 REDCLHHFQHSDFVTGVDFHPTQEKLFVSGCXXXXXXXXXXPDGRVKEWIQAPEIVTAAKFGPDGATVVAGLYHGQIIFYQTDGMRYYTQ-VECRNRKGPLRNGRKVTGLAFAHL--------PPGG------SNAAGGGGASPRGPTAAGGXXXXXXXXXSVGXXXXXXXXXTGGGG------HQLLVTTNDSRLRLYRVDDYLMACKYKGLANDSMQIKASFSEDNRYIICGSENGRVYIWATQRKGDKD----------------GGSTGANPGR-RDRNNAHESF-MAAGGDPAIATVAQFVPARAVRHALRPAD 477
BLAST of mRNA_H-paniculata_contig21138.5525.1 vs. uniprot
Match: A0A7S2ERU9_9STRA (Hypothetical protein n=4 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2ERU9_9STRA) HSP 1 Score: 179 bits (455), Expect = 2.190e-46 Identity = 112/289 (38.75%), Postives = 151/289 (52.25%), Query Frame = 1
Query: 13 LGTFTHPNFVTTVRFHPWNDHVFLTGCFDKRLRLWTVPDGRVANWVQCQDMITAANFSPDGQLTAAGLNDGRVMFYHTTDLRYYTQQIHCRNRRGGNRHGKKVTGLAFVETAQ---LRHRRQPPGDPSLVPALSAAQGGARGAEDGMMAGGVDVSSVSDGQRRGGKADSM-----------------SAQYS----------------------LLSTTNDSRLRVYDLDNFAMTSKFKGLLNDGMQIKGSISEDGKFVISGSEDGQVYIWNSKQGPSRRPSGHSVSGV 753
L F H + VT+V FHP +D FL+G DK+LR+W++ DGRV +W Q +MITAA ++PD + AGL G+V FY L+YYTQ I C+NR G + GKKVTGL F+ A+ + + QPPG G R + + MMAG + +S+ S G A SM + Y +L TTNDSRLR++ LD+F M K+KGL+N MQI+ +E G F++SGSE G VYIWN+ P VSG+
Sbjct: 455 LQIFQHADLVTSVAFHPRDDGYFLSGGSDKKLRVWSILDGRVRDWAQAPEMITAARYTPDARFVVAGLLHGQVYFYDVDGLKYYTQ-ISCKNRSGSQKEGKKVTGLTFMRGAEYDGISSKSQPPG-------------GERASRESMMAGSISISTNS---LVGTHATSMIKGPDNSTALTPRSSIRATSYENSPPVSKLKYRSRQSKIIYRDKMLVTTNDSRLRLFGLDDFCMIRKYKGLVNMQMQIRARFNETGNFIVSGSESGNVYIWNTSS--KNEPLNLKVSGL 724
BLAST of mRNA_H-paniculata_contig21138.5525.1 vs. uniprot
Match: A0A7S2KRK6_9STRA (Hypothetical protein n=2 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KRK6_9STRA) HSP 1 Score: 170 bits (431), Expect = 2.320e-45 Identity = 93/232 (40.09%), Postives = 131/232 (56.47%), Query Frame = 1
Query: 13 LGTFTHPNFVTTVRFHPWNDHVFLTGCFDKRLRLWTVPDGRVANWVQCQDMITAANFSPDGQLTAAGLNDGRVMFYHTTDLRYYTQQIHCRNRRGGNRHGKKVTGLAFVETAQLRHRRQPPGDPSLVPALSAAQGGARGAEDGMMAGGVDVSSVSDGQRRGGKADSMSAQYS--LLSTTNDSRLRVYDLDNFAMTSKFKGLLNDGMQIKGSISEDGKFVISGSEDGQVYIWN 702
L F H N V +V FHP +D F++G DK+LRLW + DGRV +W Q ++IT+ F+PDG+ AGL G+V Y L+YYTQ I CRNR G NR GKKVTG++F+ + PSL LS E G + + V G +++S + + +L +TNDSR+R+Y L++F M K+KG N+ MQI+ +SE G + GSE G +IW+
Sbjct: 82 LHLFKHANLVASVDFHPLDDRYFISGGLDKKLRLWNITDGRVKDWAQAPEVITSTRFTPDGKYAVAGLLRGQVYLYEADGLKYYTQ-IACRNRSGKNRKGKKVTGISFLREVDDKSEHSEEHHPSLTERLS---------ETGRSVANLVATKVL------GNPEALSTRRTDRMLVSTNDSRVRLYGLNDFCMIRKYKGHTNNSMQIRARVSESGSHIACGSESGHCFIWD 297
BLAST of mRNA_H-paniculata_contig21138.5525.1 vs. uniprot
Match: W7U9T0_9STRA (Wd repeat protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U9T0_9STRA) HSP 1 Score: 172 bits (437), Expect = 7.480e-45 Identity = 122/319 (38.24%), Postives = 160/319 (50.16%), Query Frame = 1
Query: 1 REERLGTFTHPNFVTTVRFHPWNDHVFLTGCFDKRLRLWTVPDGRVANWVQCQDMITAANFSPDGQLTAAGLNDGRVMFYHTTDLRYYTQQIHCRNRRGGNRHGKKVTGLAFVETAQLRHRRQPP----GDPSLVPALSAAQG--GARGAEDGMMAGGVDVSSVSDGQRRGGKADSMSAQYSLLSTTNDSRLRVYDLDNFAMTSKFKGLLNDGMQIKGSISEDGKFVISGSEDGQVYIWNSKQGPSRRPSGHSVSGVGPPIGVGGDAAAAAPATARVKSRTSLSF--SVQCSA-RPRIATVAAFVPAAALQSVLKSWDF 930
R E L + H + VT V FHP DH+F DGRV W DMITAA FSP+G + AGL G+V FY T ++YYTQ + CRNR G + GKKVTGL + ++ PP G + P L A G + + +G V + G + LL TTNDSRLR+Y ++++M K+KGL ND MQIK S SEDGK+VISGSE+GQ+YIW + GH+ GG A +AP T + T+ F S + P I +VA FVPA A+ +K +
Sbjct: 239 RSECLHVYPHVDCVTAVDFHPKIDHLFXXXXXXXXXXXXXXTDGRVKEWANTPDMITAACFSPEGSMAVAGLYRGQVFFYQTEGMKYYTQ-VECRNRHGALKGGKKVTGLCYDTSSHTVAAAFPPSSSGGATTPGPRLQGAPSTSGGHSSSFPVSSGPVSAPGPTPHSVTGAGCEQ------LLITTNDSRLRLYQTEDYSMLCKYKGLTNDHMQIKASFSEDGKYVISGSENGQIYIWKG----TTPQHGHA----------GGLAGLSAPLTFKKDRNTAYEFFPSTEIGGINPPIVSVALFVPANAVWHAMKGTSY 536
BLAST of mRNA_H-paniculata_contig21138.5525.1 vs. uniprot
Match: K0T8Q7_THAOC (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T8Q7_THAOC) HSP 1 Score: 172 bits (436), Expect = 6.220e-44 Identity = 116/311 (37.30%), Postives = 158/311 (50.80%), Query Frame = 1
Query: 1 REERLGTFTHPNFVTTVRFHPWNDHVFLTGCFDKRLRLWTVPDGRVANWVQCQDMITAANFSPDGQLTAAGLNDGRVMFYHTTD-LRYYTQQIHCRNRRGGNRHGKKVTGLAFVETAQLRHRRQPPGDPSLVPALSAAQGGARGAEDGMMAGGVDVSSVSDGQRRGGKA-DSMSAQYSLLSTTNDSRLRVYDLDNFAMTSKFKGLLNDGMQIKGSISEDGKFVISGSEDGQVYIWNSKQGPSRRPSGHSVSGVGPPIGVGGDAAAAAPATARVKSRTSLSFSVQCSARPRIATVAAFVPAAALQSVLKSWD 927
+ E L F H N V +V FHP +D F++G DK+LRLW V GRV W Q +IT FSPDG+ AGL G+V +Y D L+YYTQ I CRNR G +R GKKVTG++FV + P P ++ G A+ +G + +S + G KA D++ +L +TNDSRLR+Y+L++F + K+KG N MQI+ +SE G + GSE GQV+IW + RR H + AR K+ + SF S P I T F P +L+ L S D
Sbjct: 421 KSECLHLFKHANLVASVDFHPSDDRYFISGGVDKKLRLWDVTSGRVKEWAQSPSVITTVRFSPDGKYACAGLFRGQVYWYSVDDGLKYYTQ-IACRNRSGKHRQGKKVTGISFVRAERDDWLSTSANPPMTTPDCEDSEIGHSIAKKLSHSGREVAARLSTLRGNGAKAPDALRYTERMLVSTNDSRLRLYNLNDFCLIRKYKGNSNLSMQIRARVSESGSHIACGSETGQVFIWETSDKSRRRVGNHMMD------------------KAREKAMSHASFEASKSDLP-IVTDTVFFPGKSLREALASSD 711
BLAST of mRNA_H-paniculata_contig21138.5525.1 vs. uniprot
Match: B8BQJ4_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BQJ4_THAPS) HSP 1 Score: 172 bits (435), Expect = 2.050e-43 Identity = 100/248 (40.32%), Postives = 151/248 (60.89%), Query Frame = 1
Query: 1 REERLGTFTHPNFVTTVRFHPWNDHVFLTGCFDKRLRLWTVPDGRVANWVQCQDMITAANFSPDGQLTAAGLNDGRVMFYHTTDLRYYTQQIHCRNRRGGNRHGKKVTGLAFVETAQ---LRHRRQPP---GDPSLVPALSAAQGGARGAEDGMMAGGVDVSSVSDGQR-----RGGKADSMSAQYS--LLSTTNDSRLRVYDLDNFAMTSKFKGLLNDGMQIKGSISEDGKFVISGSEDGQVYIWNS 705
+ + L F H N V +V F+P +D F++G DK+LRLW++ DGRV +W Q D+ITAA F+ DG+ AGL G+V FY L+YYTQ I CRNR G +R GKKVTG++FV + L+ ++ P G+ +L S ++ ++G V+ + +R RGG++ + + +Y+ +L +TNDSR+R+Y L++F + K+KG N MQI+ +SE G F+ SGSE G V+IWN+
Sbjct: 780 KSQCLHLFKHANLVASVAFNPNDDRYFISGGIDKKLRLWSITDGRVRDWAQAPDVITAARFTSDGKYAVAGLFRGQVYFYDADGLKYYTQ-IACRNRSGKHRMGKKVTGISFVRGERDDWLKAKQNAPSEGGEATLDNQSSLSK----------LSGVVNEAGNRVARRVSLTFRGGESRAEALRYTERMLVSTNDSRVRLYGLNDFCLIRKYKGHTNYSMQIRARVSESGNFIASGSESGHVFIWNT 1016
BLAST of mRNA_H-paniculata_contig21138.5525.1 vs. uniprot
Match: A0A196S6S1_BLAHN (Uncharacterized protein n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196S6S1_BLAHN) HSP 1 Score: 160 bits (405), Expect = 2.040e-41 Identity = 84/231 (36.36%), Postives = 127/231 (54.98%), Query Frame = 1
Query: 13 LGTFTHPNFVTTVRFHPWNDHVFLTGCFDKRLRLWTVPDGRVANWVQCQDMITAANFSPDGQLTAAGLNDGRVMFYHTTDLRYYTQQIHCRNRRGGNRHGKKVTGLAFVETAQLRHRRQPPGDPSLVPALSAAQGGARGAEDGMMAGGVDVSSVSDGQRRGGKADSMSAQYSLLSTTNDSRLRVYDLDNFAMTSKFKGLLNDGMQIKGSISEDGKFVISGSEDGQVYIWNS 705
L F H + VT+V F+P + F++GC D++LR+W++P G V W Q +IT F P G+L AAGL+DG+V+FY++ LRY+TQ + CRNR G ++ G+KVTG++F+ ++ +RQ +L TTNDSRLRV LD F++T+KFKG +N Q+K S+S D K++ GS++G+VY+W +
Sbjct: 159 LCIFKHKDMVTSVDFYPEEEAYFISGCMDRKLRVWSIPQGCVLKWTQAPSVITTVTFCPGGRLCAAGLSDGQVIFYYSDGLRYFTQ-MECRNRHGKDKAGRKVTGISFL----VKEKRQ----------------------------------------------------YMLVTTNDSRLRVMSLDTFSITTKFKGHVNRSRQLKASLSSDRKYIACGSDNGRVYLWRT 332
BLAST of mRNA_H-paniculata_contig21138.5525.1 vs. uniprot
Match: K3WSW5_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WSW5_GLOUD) HSP 1 Score: 160 bits (404), Expect = 3.380e-41 Identity = 95/260 (36.54%), Postives = 129/260 (49.62%), Query Frame = 1
Query: 1 REERLGTFTHPNFVTTVRFHPWNDHVFLTGCFDKRLRLWTVPDGRVANWVQCQDMITAANFSPDGQLTAAGLNDGRVMFYHTTD---LRYYTQQIHCRNRRGGNRHGKKVTGLAFVETAQLRHRRQPPGDPSLVPALSAAQGGARGAEDGMMAGGVDVSSVSDGQRRGGKADSMSAQYSLLSTTNDSRLRVYDLDNFAMTSKFKGLLNDGMQIKGSISEDGKFVISGSEDGQVYIWNSKQGPSRRPSGHSVSGVGPPIGV 771
RE+ L F HP+ V V FHP D FL+GCFD + R+W +PDG V ++VQ MITAA+F+P G GL +G+ +FY + YYTQ I CRN RG + G+KVTG+ F DP +Y ++ST NDSR+R++ +DN++ K+KGL+ND +QIKG S+DG +VI GSE+G VY+WN R S PP G+
Sbjct: 187 REDCLHVFQHPDSVPAVDFHPKEDRYFLSGCFDNKARVWDIPDGCVVSYVQTPVMITAASFNPSGTRAIVGLLNGQCIFYQVNSHQQMNYYTQ-IECRNSRGPMKKGRKVTGIEF--------------DPE-------------------------------------------GKYFMVST-NDSRMRLFSVDNYSRICKYKGLVNDHLQIKGRFSQDGDYVICGSENGSVYVWNKACKHDRNASYEYFCAAEPPNGI 387 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig21138.5525.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig21138.5525.1 >prot_H-paniculata_contig21138.5525.1 ID=prot_H-paniculata_contig21138.5525.1|Name=mRNA_H-paniculata_contig21138.5525.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=390bp REERLGTFTHPNFVTTVRFHPWNDHVFLTGCFDKRLRLWTVPDGRVANWVback to top mRNA from alignment at H-paniculata_contig21138:127..4287+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig21138.5525.1 ID=mRNA_H-paniculata_contig21138.5525.1|Name=mRNA_H-paniculata_contig21138.5525.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4161bp|location=Sequence derived from alignment at H-paniculata_contig21138:127..4287+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig21138:127..4287+ >mRNA_H-paniculata_contig21138.5525.1 ID=mRNA_H-paniculata_contig21138.5525.1|Name=mRNA_H-paniculata_contig21138.5525.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2340bp|location=Sequence derived from alignment at H-paniculata_contig21138:127..4287+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |