mRNA_H-paniculata_contig21128.5521.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig21128.5521.1 vs. uniprot
Match: A0A6H5KBB7_9PHAE (FYVE-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBB7_9PHAE) HSP 1 Score: 262 bits (670), Expect = 3.170e-76 Identity = 153/334 (45.81%), Postives = 189/334 (56.59%), Query Frame = 1
Query: 1 VRHVLTHSTGLQYAFPERATFDSVSDWPKMRQVLEQAKPVWVPGARASYHFFTFGWLVAAIVEKISGVSFEEFVRKEIAAPLNVEDSFFMGRLAARGVPDTRIAAVDHTFKLP----------EGFE----------------------------------------KESNGVVGVEDNDIAAAXXXXXXXXXXXXXXXXXXXXXXXXXXGILGMMASALKEDDPEEGGAVEELGRKLVGREYFLDPRMFNHQQMREACIPAANGHFSAKALAIMYDSFLESLGLSDGHTRRSCGDHRSRSGGG---GVVGVNGENDNLLLSRAAVNEMRSYQV 843
VRHVLTHSTGLQ+AFP++ATFD V DW ++++ LE A P W PG+RASYH+FTFGWLVAA+VE+++GV F +FVR EIA PL +EDSFFMG L+A GV +RIA V+H FK+P +G E K VVG E + ++ G+L MASAL EDDP+EG A++ L RKL GREYFLDPR+FN+ QMR+ACIPAANGH +AKALA +YD+FL SLGLS ++ R R G V LL RA VNEMR+YQV
Sbjct: 1065 VRHVLTHSTGLQHAFPDKATFDRVCDWGEVQRTLEDAHPAWPPGSRASYHYFTFGWLVAAVVERVAGVPFGKFVRDEIATPLGLEDSFFMGGLSACGVEASRIAHVEHKFKIPGRSGVGLGSKDGSESAAGAGATKQEATESGXXXXXXXXXXXXXXXXXXXXXFSRKSVAAVVGPEPSLDSSQHAAGDDVIVGTEDIDEGLDEDGAPRLGLLATMASALMEDDPDEGAAIDGLARKLAGREYFLDPRVFNYPQMRDACIPAANGHMTAKALATLYDNFLGSLGLSSNANVKTSSSGRRRVVAGPSTATAAVALAKPPPLLCRARVNEMRAYQV 1398
BLAST of mRNA_H-paniculata_contig21128.5521.1 vs. uniprot
Match: D7FPK9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPK9_ECTSI) HSP 1 Score: 260 bits (664), Expect = 6.870e-76 Identity = 152/345 (44.06%), Postives = 191/345 (55.36%), Query Frame = 1
Query: 1 VRHVLTHSTGLQYAFPERATFDSVSDWPKMRQVLEQAKPVWVPGARASYHFFTFGWLVAAIVEKISGVSFEEFVRKEIAAPLNVEDSFFMGRLAARGVPDTRIAAVDHTFKLP----------EGFE---------------------------------------------------KESNGVVGVEDNDIAAAXXXXXXXXXXXXXXXXXXXXXXXXXXGILGMMASALKEDDPEEGGAVEELGRKLVGREYFLDPRMFNHQQMREACIPAANGHFSAKALAIMYDSFLESLGLSDGHTRRSCGDHRSRSGGG---GVVGVNGENDNLLLSRAAVNEMRSYQV 843
VRHVLTHSTGLQ+AFP++ATFD V DW ++++ LE A P W PG+RASYH+FTFGWLVAA+VE+++GV F +FVR EIA PL +EDSFFMG L+A GV +RIA V+H FK+P +G E ++S VVG E + ++ G+L MASAL EDDP+EG A++ L RKL GREYFLDPR+FN+ QMR+ACIPAANGH +AKALA +YD+FL SLGLS ++ R R G + LL RA VNEMR+YQV
Sbjct: 625 VRHVLTHSTGLQHAFPDKATFDKVCDWGEVQRTLEDAHPAWPPGSRASYHYFTFGWLVAAVVERVAGVPFGKFVRDEIATPLGLEDSFFMGGLSACGVEASRIAHVEHKFKIPGRSGVGLGSTDGGESTAGAGATKQEAADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRKSAAVVGPEPSLDSSQHAAGDDVIVGTEDIDEGLDEDGAPRLGLLATMASALMEDDPDEGAAIDGLARKLAGREYFLDPRVFNYPQMRDACIPAANGHMTAKALATLYDNFLGSLGLSSNAKVKTSSSGRRRVVAGPSPATASIAPAKPPSLLCRARVNEMRAYQV 969
BLAST of mRNA_H-paniculata_contig21128.5521.1 vs. uniprot
Match: A0A835ZC02_9STRA (Beta-lactamase/transpeptidase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC02_9STRA) HSP 1 Score: 202 bits (513), Expect = 2.230e-55 Identity = 133/238 (55.88%), Postives = 166/238 (69.75%), Query Frame = 1
Query: 1 VRHVLTHSTGLQYAFPERATFDSVSDWPKMRQVLEQAKPVWVPGARASYHFFTFGWLVAAIVEKISGVSFEEFVRKEIAAPLNVEDSFFMGRLAARGVPDTRIAAVDHT-FKLPEGFEKESNGVVGVEDNDIAAAXXXXXXXXXXXXXXXXXXXXXXXXXXGILGMMASALKEDDPEEGGAVEELGRKLVGREYFLDPRMFNHQQMREACIPAANGHFSAKALAIMYDSFLESLGLSD 711
+RHVLTH+TGLQ+A P A + DW + LE A PVW PG R++YH+F FG+L A VEK+SG+ F EFVR EIAAPL + F+G +AA GVP +RIAAV+ FK E F G +G D+ XXXXXXXXXXXXXXXXXXXXXXG L +MA A+KE+DP+EG A+EEL KL REY LDPR+FN + ++EACIP+ANG F+A+ALA +++ FL SLG D
Sbjct: 572 LRHVLTHATGLQHALPRDANLRVLCDWRAVLAALEDAAPVWPPGTRSAYHYFNFGFLAGACVEKLSGMPFGEFVRTEIAAPLGLSAHMFIGGVAAAGVPRSRIAAVEMAAFK--EAFGSADQGEIG----DVMREEEEAXXXXXXXXXXXXXXXXXXXXXXGFLHLMAEAIKEEDPQEGAALEELADKLRRREYLLDPRIFNSKDVQEACIPSANGLFTARALATLHNDFLLSLGAVD 803
BLAST of mRNA_H-paniculata_contig21128.5521.1 vs. uniprot
Match: A0A7S3XWD7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XWD7_HETAK) HSP 1 Score: 195 bits (496), Expect = 2.140e-53 Identity = 103/230 (44.78%), Postives = 135/230 (58.70%), Query Frame = 1
Query: 1 VRHVLTHSTGLQYAFPERATFDSVSDWPKMRQVLEQAKPVWVPGARASYHFFTFGWLVAAIVEKISGVSFEEFVRKEIAAPLNVEDSFFMGRLAARGVPDTRIAAVDHTFKLPEGFEKESNGVVGVEDNDIAAAXXXXXXXXXXXXXXXXXXXXXXXXXXGILGMMASALKEDDPEEGGAVEELGRKLVGREYFLDPRMFNHQQMREACIPAANGHFSAKALAIMYDSFL 690
VRH LTH GLQ+A + TFD + DWPK+R LE+A PVW PG+R SYH+FTFGWL+A +VE SG+ E VR +AAPL +ED F+G + ARGV R+AA++ + S+G G E L +A+ +KE+D EG A+EEL RKL GREY LDPRMFN+ +R+A PAANGHF+A+ALA+++D L
Sbjct: 606 VRHALTHRAGLQHALLDAPTFDDLCDWPKVRAALEEAAPVWEPGSRCSYHYFTFGWLLAGVVEGASGLPLAEAVRSLVAAPLGLEDEMFLGDVGARGVAPERLAALESDLAKRMQEQASSHGP-GDEXXXXXXXDKVNMAG---------------------LAFLAAGIKEEDEAEGRALEELARKLRGREYLLDPRMFNYPPLRDAVFPAANGHFTARALAVLFDRLL 813
BLAST of mRNA_H-paniculata_contig21128.5521.1 vs. uniprot
Match: A0A7S2V6Z4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V6Z4_9STRA) HSP 1 Score: 141 bits (356), Expect = 1.080e-34 Identity = 81/215 (37.67%), Postives = 114/215 (53.02%), Query Frame = 1
Query: 1 VRHVLTHSTGLQYAFPERATFDSVSDWPKMRQVLEQAKPVWVPGARASYHFFTFGWLVAAIVEKI--------SGVSFEEFVRKEIAAPLNVEDSFFMGRLAARGVPDTRIAAVDHT----FKLPEGFEKESNGVVGVEDNDIAAAXXXXXXXXXXXXXXXXXXXXXXXXXXGILGM--MASALKEDDPEEGGAVEELGRKLVGREYFLDPRMFN 603
+RHVLTHSTGLQ+ PE TFD++ DW +++LE+AKP+W PGAR SYH+FT+GWLV +I+EK + E V +E+ APL + +G L+ V + R+A ++ F G + ED+ G+ G+ +A+ +KE+D EEG A+EEL RKL GREY LDPR+FN
Sbjct: 414 IRHVLTHSTGLQHVLPENPTFDALCDWKGCQKLLEEAKPIWKPGARCSYHYFTYGWLVGSIIEKAWERTASPAGPRTCGEIVHQEVLAPLGLHQDIVLGELSRWKVQEDRLATLESDVAKRFAASMGDQAPDEEDEXXEDS----------------------------ANMGMAGLQFLAAGVKEEDEEEGKALEELARKLSGREYLLDPRIFN 600
BLAST of mRNA_H-paniculata_contig21128.5521.1 vs. uniprot
Match: A0A7S3XWC8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XWC8_HETAK) HSP 1 Score: 130 bits (327), Expect = 2.010e-30 Identity = 61/122 (50.00%), Postives = 80/122 (65.57%), Query Frame = 1
Query: 1 VRHVLTHSTGLQYAFPERATFDSVSDWPKMRQVLEQAKPVWVPGARASYHFFTFGWLVAAIVEKISGVSFEEFVRKEIAAPLNVEDSFFMGRLAARGVPDTRIAAVDHTFKLPEGFEKESNG 366
VRH LTH GLQ+A + TFD + DWPK+R LE+A PVW PG+R SYH+FTFGWL+A +VE SG+ E VR +AAPL +ED F+G + ARGV R+AA++ + S+G
Sbjct: 606 VRHALTHRAGLQHALLDAPTFDDLCDWPKVRAALEEAAPVWEPGSRCSYHYFTFGWLLAGVVEGASGLPLAEAVRSLVAAPLGLEDEMFLGDVGARGVAPERLAALESDLAKRMQEQASSHG 727
BLAST of mRNA_H-paniculata_contig21128.5521.1 vs. uniprot
Match: A0A4D9D1F3_9STRA (FYVE-type domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D1F3_9STRA) HSP 1 Score: 108 bits (269), Expect = 1.060e-22 Identity = 74/242 (30.58%), Postives = 115/242 (47.52%), Query Frame = 1
Query: 1 VRHVLTHSTGLQYAFPERATFDSVSDWPKMRQVLEQAKPVWV---PGARASYHFFTFGWLVAAIVEKISGVSFEEFVRKEIAAPLNVEDSF-----------FMGRLAARGVPDTRIAAVDHTFK-LPEGFEKESNGVVGVEDNDIAAAXXXXXXXXXXXXXXXXXXXXXXXXXXGILGMMASALK---EDDPEEGGAVEELGRKLVGREYFLDPRMFNHQQMREA-CIPAANGHFSAKALA 669
+RH+LTHS GL+YAFP AT S+ D + +++AKPV P AR S H+++FGWL+A ++E SG S + V +++ PL +E +G D R+A V++ + L E G G + G++GMM + D+ +E A ++ +KL GRE+ LDPRM N ++ R + +P+ +G FSA+ALA
Sbjct: 941 LRHILTHSAGLEYAFPRNATPQSLWDPQTGIKAVKEAKPVGAIGKPSARVSMHYYSFGWLLAPLLEAASGKSLRKLVHEKLLTPLGLEPQSESEPGGVVLGPVLGTEQLPSSDDPRLATVEYDLRELVAELSGEGCGSTGADK--------------------------------GLMGMMEGMIDVRGSDEGDEAAAFKDWQQKLTGREFLLDPRMLNGKRCRSSGSLPSLSGRFSARALA 1150
BLAST of mRNA_H-paniculata_contig21128.5521.1 vs. uniprot
Match: R7QG25_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QG25_CHOCR) HSP 1 Score: 100 bits (249), Expect = 4.240e-20 Identity = 70/242 (28.93%), Postives = 110/242 (45.45%), Query Frame = 1
Query: 1 VRHVLTHSTGLQYAFPERATFDSV-SDWPKMRQVLEQAKPVWVPGARASYHFFTFGWLVAAIVEKISGVSFEEFVRKEIAAPLNVEDSFFMGRLAARGVPD---TRIAAVDHTFKLPEGFEKESNGVVGVEDNDIAAAXXXXXXXXXXXXXXXXXXXXXXXXXXGILGMMASALKEDDPEEGGAVEELGRKLV------------GREYFLDPRMFNHQQMREACIPAANGHFSAKALAIMY 678
V HVL+HS GL YA PE + DW + + LE++ P + PG+R YH TFGWLVA ++ K +G+++++ +R + L +ED F G + +PD +R+A++ + F+ +G +G A +S K + + G V+E +++ Y LD FNH MR +P+ANGHFSA+ALA +Y
Sbjct: 618 VGHVLSHSAGLPYALPETLPMTRLRDDWEGIIKHLEESAPSFEPGSRTEYHALTFGWLVAGLITKATGMTYQQHLRI-LTEKLGIEDECFCGTMPEDLLPDVPGSRVASMSSSI-----FQDLQDGPIGKLIKQANAKRPTGSHHSDH----------------------SSDAKNESSDMAGDVKEKTERVLKDLNLPGAGIAKAPAYILDLNFFNHPVMRGGFVPSANGHFSARALAKLY 831
BLAST of mRNA_H-paniculata_contig21128.5521.1 vs. uniprot
Match: A0A5J4YM95_PORPP (Putative serine/threonine-protein kinase abkB n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YM95_PORPP) HSP 1 Score: 94.4 bits (233), Expect = 5.320e-18 Identity = 70/249 (28.11%), Postives = 105/249 (42.17%), Query Frame = 1
Query: 1 VRHVLTHSTGLQYAFPE---RATFDSVSDWPKMRQVLEQAKPVWVPGARASYHFFTFGWLVAAIVEKISGVSFEEFVRKEIAAPLNVEDSFFMG----------------RLAARGVPDTRIAAVDHTFKLPEGFEKESNGVVGVEDNDIAAAXXXXXXXXXXXXXXXXXXXXXXXXXXGILGMMASALKEDDPEEGGAV---EELGRKLVGREYFLDPRMFNHQQMREACIPAANGHFSAKALAIMYD 681
VRH+L+HS GL A E + F+ +S W M Q ++ A P PG YH +FGWL+ ++E + G SFE+ ++ E+A P+ +E + G RLA+ + A + K+ E ++ G+V E N A L +A + P A E G G P FN+ ++R ACIPAANGH +A+A+A + D
Sbjct: 626 VRHILSHSAGLARAGLESLMESPFEMLS-WDTMLQHMQNATPSSKPGDVCEYHALSFGWLLGYVIEHMGGASFEKLLKTELAEPMGLESDMWCGFPADTNGQSAFPDVEHRLASLAMGKLVEAMRERFSKMSEKDQQRLKGLVRTEQNGTGADMRPEERMAKIQDH---------------LDSIAPEDESSTPSSDNASFKPEAAGASAEGSSLTSTPSFFNYSKLRRACIPAANGHVTARAVAALMD 858
BLAST of mRNA_H-paniculata_contig21128.5521.1 vs. uniprot
Match: A0A2V3ITD2_9FLOR (Putative aarF domain-containing protein kinase 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ITD2_9FLOR) HSP 1 Score: 92.4 bits (228), Expect = 2.410e-17 Identity = 65/234 (27.78%), Postives = 102/234 (43.59%), Query Frame = 1
Query: 1 VRHVLTHSTGLQYAFPERATFDSV-SDWPKMRQVLEQAKPVWVPGARASYHFFTFGWLVAAIVEKISGVSFEEFVRKEIAAPLNVEDSFFMGRLAARGVPD---TRIAAVDHTFKLPEGFEKESNGVVGVEDNDIAAAXXXXXXXXXXXXXXXXXXXXXXXXXXGILGMMASALKEDDPEEGGAVEELGRKLVGRE----YFLDPRMFNHQQMREACIPAANGHFSAKALAIMY 678
+ H+L+HS GL A PE + DW + + LE ++P VPG R+ YH TFGWLVA ++ KI+G +++ +RK + +ED F G + +PD +R+A++ + G +G A A G+ + E + L G Y LD FNH +R +P+ANGHF+A+ALA+++
Sbjct: 618 IAHILSHSAGLAQALPEDMNMLRLRDDWKGIIEHLETSRPAHVPGERSEYHVLTFGWLVAGLIMKITGHTYQNHLRK-LVKEFGIEDECFCGTMPEDLLPDVSGSRVASLSSSI-----INDIQRGPIGK-----AIAHVKTGNCSNKKYDSKDKTSKAAEDIGGV--------RNPQEEAKAILNNLNVPATGLSQAPAYLLDLNFFNHPVLRAGFVPSANGHFTARALAMLF 832 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig21128.5521.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig21128.5521.1 >prot_H-paniculata_contig21128.5521.1 ID=prot_H-paniculata_contig21128.5521.1|Name=mRNA_H-paniculata_contig21128.5521.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=281bp VRHVLTHSTGLQYAFPERATFDSVSDWPKMRQVLEQAKPVWVPGARASYHback to top mRNA from alignment at H-paniculata_contig21128:582..3831- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig21128.5521.1 ID=mRNA_H-paniculata_contig21128.5521.1|Name=mRNA_H-paniculata_contig21128.5521.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3250bp|location=Sequence derived from alignment at H-paniculata_contig21128:582..3831- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig21128:582..3831- >mRNA_H-paniculata_contig21128.5521.1 ID=mRNA_H-paniculata_contig21128.5521.1|Name=mRNA_H-paniculata_contig21128.5521.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1686bp|location=Sequence derived from alignment at H-paniculata_contig21128:582..3831- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |