mRNA_H-paniculata_contig21128.5521.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig21128.5521.1
Unique NamemRNA_H-paniculata_contig21128.5521.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig21128.5521.1 vs. uniprot
Match: A0A6H5KBB7_9PHAE (FYVE-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBB7_9PHAE)

HSP 1 Score: 262 bits (670), Expect = 3.170e-76
Identity = 153/334 (45.81%), Postives = 189/334 (56.59%), Query Frame = 1
Query:    1 VRHVLTHSTGLQYAFPERATFDSVSDWPKMRQVLEQAKPVWVPGARASYHFFTFGWLVAAIVEKISGVSFEEFVRKEIAAPLNVEDSFFMGRLAARGVPDTRIAAVDHTFKLP----------EGFE----------------------------------------KESNGVVGVEDNDIAAAXXXXXXXXXXXXXXXXXXXXXXXXXXGILGMMASALKEDDPEEGGAVEELGRKLVGREYFLDPRMFNHQQMREACIPAANGHFSAKALAIMYDSFLESLGLSDGHTRRSCGDHRSRSGGG---GVVGVNGENDNLLLSRAAVNEMRSYQV 843
            VRHVLTHSTGLQ+AFP++ATFD V DW ++++ LE A P W PG+RASYH+FTFGWLVAA+VE+++GV F +FVR EIA PL +EDSFFMG L+A GV  +RIA V+H FK+P          +G E                                        K    VVG E +  ++                           G+L  MASAL EDDP+EG A++ L RKL GREYFLDPR+FN+ QMR+ACIPAANGH +AKALA +YD+FL SLGLS     ++    R R   G       V       LL RA VNEMR+YQV
Sbjct: 1065 VRHVLTHSTGLQHAFPDKATFDRVCDWGEVQRTLEDAHPAWPPGSRASYHYFTFGWLVAAVVERVAGVPFGKFVRDEIATPLGLEDSFFMGGLSACGVEASRIAHVEHKFKIPGRSGVGLGSKDGSESAAGAGATKQEATESGXXXXXXXXXXXXXXXXXXXXXFSRKSVAAVVGPEPSLDSSQHAAGDDVIVGTEDIDEGLDEDGAPRLGLLATMASALMEDDPDEGAAIDGLARKLAGREYFLDPRVFNYPQMRDACIPAANGHMTAKALATLYDNFLGSLGLSSNANVKTSSSGRRRVVAGPSTATAAVALAKPPPLLCRARVNEMRAYQV 1398          
BLAST of mRNA_H-paniculata_contig21128.5521.1 vs. uniprot
Match: D7FPK9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPK9_ECTSI)

HSP 1 Score: 260 bits (664), Expect = 6.870e-76
Identity = 152/345 (44.06%), Postives = 191/345 (55.36%), Query Frame = 1
Query:    1 VRHVLTHSTGLQYAFPERATFDSVSDWPKMRQVLEQAKPVWVPGARASYHFFTFGWLVAAIVEKISGVSFEEFVRKEIAAPLNVEDSFFMGRLAARGVPDTRIAAVDHTFKLP----------EGFE---------------------------------------------------KESNGVVGVEDNDIAAAXXXXXXXXXXXXXXXXXXXXXXXXXXGILGMMASALKEDDPEEGGAVEELGRKLVGREYFLDPRMFNHQQMREACIPAANGHFSAKALAIMYDSFLESLGLSDGHTRRSCGDHRSRSGGG---GVVGVNGENDNLLLSRAAVNEMRSYQV 843
            VRHVLTHSTGLQ+AFP++ATFD V DW ++++ LE A P W PG+RASYH+FTFGWLVAA+VE+++GV F +FVR EIA PL +EDSFFMG L+A GV  +RIA V+H FK+P          +G E                                                   ++S  VVG E +  ++                           G+L  MASAL EDDP+EG A++ L RKL GREYFLDPR+FN+ QMR+ACIPAANGH +AKALA +YD+FL SLGLS     ++    R R   G       +       LL RA VNEMR+YQV
Sbjct:  625 VRHVLTHSTGLQHAFPDKATFDKVCDWGEVQRTLEDAHPAWPPGSRASYHYFTFGWLVAAVVERVAGVPFGKFVRDEIATPLGLEDSFFMGGLSACGVEASRIAHVEHKFKIPGRSGVGLGSTDGGESTAGAGATKQEAADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRKSAAVVGPEPSLDSSQHAAGDDVIVGTEDIDEGLDEDGAPRLGLLATMASALMEDDPDEGAAIDGLARKLAGREYFLDPRVFNYPQMRDACIPAANGHMTAKALATLYDNFLGSLGLSSNAKVKTSSSGRRRVVAGPSPATASIAPAKPPSLLCRARVNEMRAYQV 969          
BLAST of mRNA_H-paniculata_contig21128.5521.1 vs. uniprot
Match: A0A835ZC02_9STRA (Beta-lactamase/transpeptidase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC02_9STRA)

HSP 1 Score: 202 bits (513), Expect = 2.230e-55
Identity = 133/238 (55.88%), Postives = 166/238 (69.75%), Query Frame = 1
Query:    1 VRHVLTHSTGLQYAFPERATFDSVSDWPKMRQVLEQAKPVWVPGARASYHFFTFGWLVAAIVEKISGVSFEEFVRKEIAAPLNVEDSFFMGRLAARGVPDTRIAAVDHT-FKLPEGFEKESNGVVGVEDNDIAAAXXXXXXXXXXXXXXXXXXXXXXXXXXGILGMMASALKEDDPEEGGAVEELGRKLVGREYFLDPRMFNHQQMREACIPAANGHFSAKALAIMYDSFLESLGLSD 711
            +RHVLTH+TGLQ+A P  A    + DW  +   LE A PVW PG R++YH+F FG+L  A VEK+SG+ F EFVR EIAAPL +    F+G +AA GVP +RIAAV+   FK  E F     G +G    D+       XXXXXXXXXXXXXXXXXXXXXXG L +MA A+KE+DP+EG A+EEL  KL  REY LDPR+FN + ++EACIP+ANG F+A+ALA +++ FL SLG  D
Sbjct:  572 LRHVLTHATGLQHALPRDANLRVLCDWRAVLAALEDAAPVWPPGTRSAYHYFNFGFLAGACVEKLSGMPFGEFVRTEIAAPLGLSAHMFIGGVAAAGVPRSRIAAVEMAAFK--EAFGSADQGEIG----DVMREEEEAXXXXXXXXXXXXXXXXXXXXXXGFLHLMAEAIKEEDPQEGAALEELADKLRRREYLLDPRIFNSKDVQEACIPSANGLFTARALATLHNDFLLSLGAVD 803          
BLAST of mRNA_H-paniculata_contig21128.5521.1 vs. uniprot
Match: A0A7S3XWD7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XWD7_HETAK)

HSP 1 Score: 195 bits (496), Expect = 2.140e-53
Identity = 103/230 (44.78%), Postives = 135/230 (58.70%), Query Frame = 1
Query:    1 VRHVLTHSTGLQYAFPERATFDSVSDWPKMRQVLEQAKPVWVPGARASYHFFTFGWLVAAIVEKISGVSFEEFVRKEIAAPLNVEDSFFMGRLAARGVPDTRIAAVDHTFKLPEGFEKESNGVVGVEDNDIAAAXXXXXXXXXXXXXXXXXXXXXXXXXXGILGMMASALKEDDPEEGGAVEELGRKLVGREYFLDPRMFNHQQMREACIPAANGHFSAKALAIMYDSFL 690
            VRH LTH  GLQ+A  +  TFD + DWPK+R  LE+A PVW PG+R SYH+FTFGWL+A +VE  SG+   E VR  +AAPL +ED  F+G + ARGV   R+AA++         +  S+G  G E                                   L  +A+ +KE+D  EG A+EEL RKL GREY LDPRMFN+  +R+A  PAANGHF+A+ALA+++D  L
Sbjct:  606 VRHALTHRAGLQHALLDAPTFDDLCDWPKVRAALEEAAPVWEPGSRCSYHYFTFGWLLAGVVEGASGLPLAEAVRSLVAAPLGLEDEMFLGDVGARGVAPERLAALESDLAKRMQEQASSHGP-GDEXXXXXXXDKVNMAG---------------------LAFLAAGIKEEDEAEGRALEELARKLRGREYLLDPRMFNYPPLRDAVFPAANGHFTARALAVLFDRLL 813          
BLAST of mRNA_H-paniculata_contig21128.5521.1 vs. uniprot
Match: A0A7S2V6Z4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V6Z4_9STRA)

HSP 1 Score: 141 bits (356), Expect = 1.080e-34
Identity = 81/215 (37.67%), Postives = 114/215 (53.02%), Query Frame = 1
Query:    1 VRHVLTHSTGLQYAFPERATFDSVSDWPKMRQVLEQAKPVWVPGARASYHFFTFGWLVAAIVEKI--------SGVSFEEFVRKEIAAPLNVEDSFFMGRLAARGVPDTRIAAVDHT----FKLPEGFEKESNGVVGVEDNDIAAAXXXXXXXXXXXXXXXXXXXXXXXXXXGILGM--MASALKEDDPEEGGAVEELGRKLVGREYFLDPRMFN 603
            +RHVLTHSTGLQ+  PE  TFD++ DW   +++LE+AKP+W PGAR SYH+FT+GWLV +I+EK            +  E V +E+ APL +     +G L+   V + R+A ++      F    G +         ED+                               G+ G+  +A+ +KE+D EEG A+EEL RKL GREY LDPR+FN
Sbjct:  414 IRHVLTHSTGLQHVLPENPTFDALCDWKGCQKLLEEAKPIWKPGARCSYHYFTYGWLVGSIIEKAWERTASPAGPRTCGEIVHQEVLAPLGLHQDIVLGELSRWKVQEDRLATLESDVAKRFAASMGDQAPDEEDEXXEDS----------------------------ANMGMAGLQFLAAGVKEEDEEEGKALEELARKLSGREYLLDPRIFN 600          
BLAST of mRNA_H-paniculata_contig21128.5521.1 vs. uniprot
Match: A0A7S3XWC8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XWC8_HETAK)

HSP 1 Score: 130 bits (327), Expect = 2.010e-30
Identity = 61/122 (50.00%), Postives = 80/122 (65.57%), Query Frame = 1
Query:    1 VRHVLTHSTGLQYAFPERATFDSVSDWPKMRQVLEQAKPVWVPGARASYHFFTFGWLVAAIVEKISGVSFEEFVRKEIAAPLNVEDSFFMGRLAARGVPDTRIAAVDHTFKLPEGFEKESNG 366
            VRH LTH  GLQ+A  +  TFD + DWPK+R  LE+A PVW PG+R SYH+FTFGWL+A +VE  SG+   E VR  +AAPL +ED  F+G + ARGV   R+AA++         +  S+G
Sbjct:  606 VRHALTHRAGLQHALLDAPTFDDLCDWPKVRAALEEAAPVWEPGSRCSYHYFTFGWLLAGVVEGASGLPLAEAVRSLVAAPLGLEDEMFLGDVGARGVAPERLAALESDLAKRMQEQASSHG 727          
BLAST of mRNA_H-paniculata_contig21128.5521.1 vs. uniprot
Match: A0A4D9D1F3_9STRA (FYVE-type domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D1F3_9STRA)

HSP 1 Score: 108 bits (269), Expect = 1.060e-22
Identity = 74/242 (30.58%), Postives = 115/242 (47.52%), Query Frame = 1
Query:    1 VRHVLTHSTGLQYAFPERATFDSVSDWPKMRQVLEQAKPVWV---PGARASYHFFTFGWLVAAIVEKISGVSFEEFVRKEIAAPLNVEDSF-----------FMGRLAARGVPDTRIAAVDHTFK-LPEGFEKESNGVVGVEDNDIAAAXXXXXXXXXXXXXXXXXXXXXXXXXXGILGMMASALK---EDDPEEGGAVEELGRKLVGREYFLDPRMFNHQQMREA-CIPAANGHFSAKALA 669
            +RH+LTHS GL+YAFP  AT  S+ D     + +++AKPV     P AR S H+++FGWL+A ++E  SG S  + V +++  PL +E               +G        D R+A V++  + L      E  G  G +                                 G++GMM   +     D+ +E  A ++  +KL GRE+ LDPRM N ++ R +  +P+ +G FSA+ALA
Sbjct:  941 LRHILTHSAGLEYAFPRNATPQSLWDPQTGIKAVKEAKPVGAIGKPSARVSMHYYSFGWLLAPLLEAASGKSLRKLVHEKLLTPLGLEPQSESEPGGVVLGPVLGTEQLPSSDDPRLATVEYDLRELVAELSGEGCGSTGADK--------------------------------GLMGMMEGMIDVRGSDEGDEAAAFKDWQQKLTGREFLLDPRMLNGKRCRSSGSLPSLSGRFSARALA 1150          
BLAST of mRNA_H-paniculata_contig21128.5521.1 vs. uniprot
Match: R7QG25_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QG25_CHOCR)

HSP 1 Score: 100 bits (249), Expect = 4.240e-20
Identity = 70/242 (28.93%), Postives = 110/242 (45.45%), Query Frame = 1
Query:    1 VRHVLTHSTGLQYAFPERATFDSV-SDWPKMRQVLEQAKPVWVPGARASYHFFTFGWLVAAIVEKISGVSFEEFVRKEIAAPLNVEDSFFMGRLAARGVPD---TRIAAVDHTFKLPEGFEKESNGVVGVEDNDIAAAXXXXXXXXXXXXXXXXXXXXXXXXXXGILGMMASALKEDDPEEGGAVEELGRKLV------------GREYFLDPRMFNHQQMREACIPAANGHFSAKALAIMY 678
            V HVL+HS GL YA PE      +  DW  + + LE++ P + PG+R  YH  TFGWLVA ++ K +G+++++ +R  +   L +ED  F G +    +PD   +R+A++  +      F+   +G +G       A                                 +S  K +  +  G V+E   +++               Y LD   FNH  MR   +P+ANGHFSA+ALA +Y
Sbjct:  618 VGHVLSHSAGLPYALPETLPMTRLRDDWEGIIKHLEESAPSFEPGSRTEYHALTFGWLVAGLITKATGMTYQQHLRI-LTEKLGIEDECFCGTMPEDLLPDVPGSRVASMSSSI-----FQDLQDGPIGKLIKQANAKRPTGSHHSDH----------------------SSDAKNESSDMAGDVKEKTERVLKDLNLPGAGIAKAPAYILDLNFFNHPVMRGGFVPSANGHFSARALAKLY 831          
BLAST of mRNA_H-paniculata_contig21128.5521.1 vs. uniprot
Match: A0A5J4YM95_PORPP (Putative serine/threonine-protein kinase abkB n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YM95_PORPP)

HSP 1 Score: 94.4 bits (233), Expect = 5.320e-18
Identity = 70/249 (28.11%), Postives = 105/249 (42.17%), Query Frame = 1
Query:    1 VRHVLTHSTGLQYAFPE---RATFDSVSDWPKMRQVLEQAKPVWVPGARASYHFFTFGWLVAAIVEKISGVSFEEFVRKEIAAPLNVEDSFFMG----------------RLAARGVPDTRIAAVDHTFKLPEGFEKESNGVVGVEDNDIAAAXXXXXXXXXXXXXXXXXXXXXXXXXXGILGMMASALKEDDPEEGGAV---EELGRKLVGREYFLDPRMFNHQQMREACIPAANGHFSAKALAIMYD 681
            VRH+L+HS GL  A  E    + F+ +S W  M Q ++ A P   PG    YH  +FGWL+  ++E + G SFE+ ++ E+A P+ +E   + G                RLA+  +     A  +   K+ E  ++   G+V  E N   A                             L  +A   +   P    A    E  G    G      P  FN+ ++R ACIPAANGH +A+A+A + D
Sbjct:  626 VRHILSHSAGLARAGLESLMESPFEMLS-WDTMLQHMQNATPSSKPGDVCEYHALSFGWLLGYVIEHMGGASFEKLLKTELAEPMGLESDMWCGFPADTNGQSAFPDVEHRLASLAMGKLVEAMRERFSKMSEKDQQRLKGLVRTEQNGTGADMRPEERMAKIQDH---------------LDSIAPEDESSTPSSDNASFKPEAAGASAEGSSLTSTPSFFNYSKLRRACIPAANGHVTARAVAALMD 858          
BLAST of mRNA_H-paniculata_contig21128.5521.1 vs. uniprot
Match: A0A2V3ITD2_9FLOR (Putative aarF domain-containing protein kinase 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ITD2_9FLOR)

HSP 1 Score: 92.4 bits (228), Expect = 2.410e-17
Identity = 65/234 (27.78%), Postives = 102/234 (43.59%), Query Frame = 1
Query:    1 VRHVLTHSTGLQYAFPERATFDSV-SDWPKMRQVLEQAKPVWVPGARASYHFFTFGWLVAAIVEKISGVSFEEFVRKEIAAPLNVEDSFFMGRLAARGVPD---TRIAAVDHTFKLPEGFEKESNGVVGVEDNDIAAAXXXXXXXXXXXXXXXXXXXXXXXXXXGILGMMASALKEDDPEEGGAVEELGRKLVGRE----YFLDPRMFNHQQMREACIPAANGHFSAKALAIMY 678
            + H+L+HS GL  A PE      +  DW  + + LE ++P  VPG R+ YH  TFGWLVA ++ KI+G +++  +RK +     +ED  F G +    +PD   +R+A++  +            G +G      A A                          G+        +    E    +  L     G      Y LD   FNH  +R   +P+ANGHF+A+ALA+++
Sbjct:  618 IAHILSHSAGLAQALPEDMNMLRLRDDWKGIIEHLETSRPAHVPGERSEYHVLTFGWLVAGLIMKITGHTYQNHLRK-LVKEFGIEDECFCGTMPEDLLPDVSGSRVASLSSSI-----INDIQRGPIGK-----AIAHVKTGNCSNKKYDSKDKTSKAAEDIGGV--------RNPQEEAKAILNNLNVPATGLSQAPAYLLDLNFFNHPVLRAGFVPSANGHFTARALAMLF 832          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig21128.5521.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KBB7_9PHAE3.170e-7645.81FYVE-type domain-containing protein n=1 Tax=Ectoca... [more]
D7FPK9_ECTSI6.870e-7644.06Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZC02_9STRA2.230e-5555.88Beta-lactamase/transpeptidase-like protein n=1 Tax... [more]
A0A7S3XWD7_HETAK2.140e-5344.78Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S2V6Z4_9STRA1.080e-3437.67Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A7S3XWC8_HETAK2.010e-3050.00Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A4D9D1F3_9STRA1.060e-2230.58FYVE-type domain-containing protein n=2 Tax=Monodo... [more]
R7QG25_CHOCR4.240e-2028.93Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A5J4YM95_PORPP5.320e-1828.11Putative serine/threonine-protein kinase abkB n=1 ... [more]
A0A2V3ITD2_9FLOR2.410e-1727.78Putative aarF domain-containing protein kinase 1 n... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig21128contigH-paniculata_contig21128:582..3831 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score259.6
Seed ortholog evalue1.7e-66
Seed eggNOG ortholog2880.D7FPK9
KEGG koko:K08869,ko:K10779
Hectar predicted targeting categoryother localisation
EggNOG free text desc.regulation of tocopherol cyclase activity
EggNOG OGsCOG0661@1,KOG1235@2759
EC3.6.4.12
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01001,ko03000,ko03036
Exons3
Model size843
Cds size843
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig21128.5521.1prot_H-paniculata_contig21128.5521.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig21128 582..3831 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929560.7780933-CDS-H-paniculata_contig21128:581..8121622929560.7780933-CDS-H-paniculata_contig21128:581..812Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig21128 582..812 -
1691480914.300284-CDS-H-paniculata_contig21128:581..8121691480914.300284-CDS-H-paniculata_contig21128:581..812Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig21128 582..812 -
1622929560.7909386-CDS-H-paniculata_contig21128:2524..29201622929560.7909386-CDS-H-paniculata_contig21128:2524..2920Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig21128 2525..2920 -
1691480914.31212-CDS-H-paniculata_contig21128:2524..29201691480914.31212-CDS-H-paniculata_contig21128:2524..2920Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig21128 2525..2920 -
1622929560.809007-CDS-H-paniculata_contig21128:3615..38311622929560.809007-CDS-H-paniculata_contig21128:3615..3831Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig21128 3616..3831 -
1691480914.321246-CDS-H-paniculata_contig21128:3615..38311691480914.321246-CDS-H-paniculata_contig21128:3615..3831Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig21128 3616..3831 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig21128.5521.1

>prot_H-paniculata_contig21128.5521.1 ID=prot_H-paniculata_contig21128.5521.1|Name=mRNA_H-paniculata_contig21128.5521.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=281bp
VRHVLTHSTGLQYAFPERATFDSVSDWPKMRQVLEQAKPVWVPGARASYH
FFTFGWLVAAIVEKISGVSFEEFVRKEIAAPLNVEDSFFMGRLAARGVPD
TRIAAVDHTFKLPEGFEKESNGVVGVEDNDIAAAEAEAEAEADANANGGG
QGGEGGGGGGGILGMMASALKEDDPEEGGAVEELGRKLVGREYFLDPRMF
NHQQMREACIPAANGHFSAKALAIMYDSFLESLGLSDGHTRRSCGDHRSR
SGGGGVVGVNGENDNLLLSRAAVNEMRSYQV
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mRNA from alignment at H-paniculata_contig21128:582..3831-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig21128.5521.1 ID=mRNA_H-paniculata_contig21128.5521.1|Name=mRNA_H-paniculata_contig21128.5521.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3250bp|location=Sequence derived from alignment at H-paniculata_contig21128:582..3831- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTGAGACACGTACTGACCCACTCTACGGGGTTACAGTACGCCTTTCCGGA GCGCGCGACCTTTGATAGCGTTTCCGATTGGCCCAAAATGCGGCAAGTAC TGGAGCAGGCGAAGCCGGTGTGGGTTCCCGGGGCGCGGGCGTCGTACCAT TTCTTCACGTTCGGGTGGCTGGTAGCGGCCATCGTGGAAAAGATATCTGG TGTTTCGTTCGAAGAGGTGAGGGGCGCATTTTGTATTTGAGTTCATAGCT TTACCTTTCCCCCTTTTGTAGCGGTGTTAGGAGAGGAGGGGGCATATGGC GTGGCGCGTATGTGGCGCGGGATGGAGGGAGGGGCTGGGCAGTGGGTGCA CGGGCGGGCGGTGGTTGAAGAGTTCATTGTCAGAGCTTGTTGTGTTTGCG CCTGCTGCATGGGACTGTCTCTCGTGGTTTCCGTCCTCCCCCCTATTTGT TGTATTAGTTGTTTTGTTGAAAAGAAGCATAAGCGGCCTTGTTTTTGTTC GGGTTGGGTAACCTCAGCATGGGTGTGAGAAATGCTGTAACATACGTACT GTATATCGTGCCAGGAAGTGAGAAAGGGGGTTGACCCGTGAACTGAATGA GGATTTTGTTTTGCAACTCGGGTGGGTATTCTTGTCGGGTGCTCACGTCC AGGTCATCTTCTATCCACGCACTGCACAGACGCCAGTGATGCGGCCATGC TCCTTGGTGAACGTAATAATAGTCCACGTCCTGTTCCGGTTCTAAATGAT GCGAGCAATCCGCCCTTCCCTCAATAAAAACCTTGTTGATTATTGATCAT CACCAGCACGCCCATGAAAACAGTTTCTTCCTAATTTCACCTTTCAACCC CCCCCCCCCTCCCCCTCCCCCTCCCCCTCCCTAAAACATTTTTTTTTAAT AAAACACGCAGTTCGTGCGTAAAGAAATCGCGGCTCCGCTTAACGTGGAG GATTCTTTCTTCATGGGACGTTTGGCCGCGCGTGGCGTCCCGGACACACG GATAGCCGCCGTAGACCACACGTTCAAACTTCCCGAAGGCTTCGAGAAAG AGAGCAATGGTGTCGTGGGTGTTGAGGATAACGACATCGCAGCGGCGGAG GCAGAGGCAGAGGCAGAGGCAGATGCGAATGCCAACGGAGGCGGTCAGGG GGGAGAGGGAGGAGGTGGCGGCGGCGGTATTTTGGGCATGATGGCTTCTG CACTCAAAGAGGATGATCCAGAGGAAGGTGGGGCCGTGGAGGAGTTGGGG CGGAAGCTGGTCGGTAGGGAGTATTTCCTCGACCCCCGGATGTTCAATCA CCAGCAGGTGTGTATGTGGTGTATGTAGTAGTGTGTTGTGGATGTTTGAA GTGATGCTGCTGAGAACATGTGTTGTATGCAAGGAATTTTATTACTTCGG TGAACAATTGACTTCAGTGCTTATTTATGTGTTGATTTTTTTTTCAGGCG GTGTTTGTGTCGTGTGTTGTTTGAATGTTGTGTTTTTTGCTGGACTGGGC TGAGCTATGTGCTGGGCTATTCTGCGCTATCCTGGGTTATGTTGGGTTAT TTGTCCAGAATCCTTCTAACATATTAGACTCTGGGGATGGTCGTTTCGAA ACTCTTTTTCAATTATCAACTGAAGTAAGTTTAGACACGAACAACTAAAT CTCTAAACGGTCAGTTCATACGTAGCCACCACGTTGAGTGCACAACATAA CACAGAATGTAATACCCTACTCAGTACTAACATAGCATGTGCACAAGAAC AATGACAGGTAACCTGCAGCTACAGGGCTAGACAAGGCAACAAAGATGCA ACTCTAGAAAAGTTAATCGTGAGTTCAAATCCCGACGGACACCGATTTTT TTCGTGTGGTTTCAATTTCGGAAGGCGCGGCACTTCTAGGGAGTGTCGTG GAAAGATAAAACTCGTGAATAAATTGACCTGCCCATTGAACAAAATATGT ATCAGAAAGCGACGTTAGCGTTGGCAAAGGGAGCAACCCTCCTCGGAGCG AAAGTGGTCGGTTGTTCGAACCTTACAATTAAATTTTGTACAGGAAGCAG CTCAGGGGTGAGTTGCTTTCTGTACACAACAGAGACAGTTTCTTTTGTTT CTGTGTTGCATGCGTTTGTCATAAGGGTTGTCGTCGAGGCTGTCGTCCAC ACCCAGTACAGCTCTAAACTAACACAGAATGAAACTAACTTTCCAGCTTA TGGCACCACCTGCGAAAGCTGCGCTGGGTTTGTGGGCCAGGGGCGATGTG CATGGTTATTGCAACCCCTTATGGAGGGGGGAGGGTTCATTAGACCACGT ACTAACTGCAGCTTGATATCTCGTCAGTGAGGGATATATCATAGATATAC AGAAATTATGGCTATTTCCTTGGGATGCCAACTTGAGATAGCTGAGCAGA GATGCGAACGTAAATGAGCCACGGCGAGCGCAGCAAGTCCATATATACTC CGGAGTATTCAGCGGAACTTGAATGCTAATACTGACTAAATGAGCGCGAA ACTTGGACGTAAAATATGCTGATGTGGGCGTAAGCGAGCCACGGCGAGAG AATAGCAAGTCGGTGTGTATTGAAGCGAACATTTTGAATGTTGAGTGAGC CCATGTGCGAGCGTGAGCCAGTAACGGCGAGTGCAGCGAGTCCGTTTGCG TAAGTTATTGCTGGTTTGGCAATATTGTTGACGCAGTCCTCGCCACTGGT GTAGCCGTTGCCTGTCCAGCAGTCCGTACTAAACGCGAGATATTCATCTT GAAGGCTTTGGGGAAGACATCCCGAAAATGCTGATAATTTTTGTAGTAGG TGGCACTGATGAATAGTCGTGTTTTGTGCCGGGAGGTACTTGTGTCGTGT CTGTGGCCCTCGAATTTTTGTCTCTCTGTCATGCCCCCTCTCCATCGACT TCACCGTTTCTTCCCGCCTAATGAGGCAACTACCCGCCCCCAGACTGTCT GTCCCCAGTACTAGATACTGCCAAGATCCAATGTTGATATATTTATTTAT TTATTTATTTTTCTCACAGATGAGGGAGGCGTGCATTCCGGCAGCCAACG GTCACTTCTCGGCGAAAGCGCTCGCGATCATGTACGATAGCTTCCTGGAG TCTCTGGGCCTTAGCGATGGGCATACCCGTCGTTCGTGCGGAGATCACCG CAGCCGCAGCGGCGGCGGAGGGGTTGTCGGTGTCAATGGTGAAAACGACA ACCTGCTGTTGAGCCGGGCAGCAGTGAACGAGATGCGGTCGTATCAGGTA
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Coding sequence (CDS) from alignment at H-paniculata_contig21128:582..3831-

>mRNA_H-paniculata_contig21128.5521.1 ID=mRNA_H-paniculata_contig21128.5521.1|Name=mRNA_H-paniculata_contig21128.5521.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1686bp|location=Sequence derived from alignment at H-paniculata_contig21128:582..3831- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTGAGACACGTACTGACCCACTCTACGGGGTTACAGTACGCCTTTCCGGA
GCGCGCGACCTTTGATAGCGTTTCCGATTGGCCCAAAATGCGGCAAGTAC
TGGAGCAGGCGAAGCCGGTGTGGGTTCCCGGGGCGCGGGCGTCGTACCAT
TTCTTCACGTTCGGGTGGCTGGTAGCGGCCATCGTGGAAAAGATATCTGG
TGTTTCGTTCGAAGAGGTGAGACACGTACTGACCCACTCTACGGGGTTAC
AGTACGCCTTTCCGGAGCGCGCGACCTTTGATAGCGTTTCCGATTGGCCC
AAAATGCGGCAAGTACTGGAGCAGGCGAAGCCGGTGTGGGTTCCCGGGGC
GCGGGCGTCGTACCATTTCTTCACGTTCGGGTGGCTGGTAGCGGCCATCG
TGGAAAAGATATCTGGTGTTTCGTTCGAAGAGTTCGTGCGTAAAGAAATC
GCGGCTCCGCTTAACGTGGAGGATTCTTTCTTCATGGGACGTTTGGCCGC
GCGTGGCGTCCCGGACACACGGATAGCCGCCGTAGACCACACGTTCAAAC
TTCCCGAAGGCTTCGAGAAAGAGAGCAATGGTGTCGTGGGTGTTGAGGAT
AACGACATCGCAGCGGCGGAGGCAGAGGCAGAGGCAGAGGCAGATGCGAA
TGCCAACGGAGGCGGTCAGGGGGGAGAGGGAGGAGGTGGCGGCGGCGGTA
TTTTGGGCATGATGGCTTCTGCACTCAAAGAGGATGATCCAGAGGAAGGT
GGGGCCGTGGAGGAGTTGGGGCGGAAGCTGGTCGGTAGGGAGTATTTCCT
CGACCCCCGGATGTTCAATCACCAGCAGTTCGTGCGTAAAGAAATCGCGG
CTCCGCTTAACGTGGAGGATTCTTTCTTCATGGGACGTTTGGCCGCGCGT
GGCGTCCCGGACACACGGATAGCCGCCGTAGACCACACGTTCAAACTTCC
CGAAGGCTTCGAGAAAGAGAGCAATGGTGTCGTGGGTGTTGAGGATAACG
ACATCGCAGCGGCGGAGGCAGAGGCAGAGGCAGAGGCAGATGCGAATGCC
AACGGAGGCGGTCAGGGGGGAGAGGGAGGAGGTGGCGGCGGCGGTATTTT
GGGCATGATGGCTTCTGCACTCAAAGAGGATGATCCAGAGGAAGGTGGGG
CCGTGGAGGAGTTGGGGCGGAAGCTGGTCGGTAGGGAGTATTTCCTCGAC
CCCCGGATGTTCAATCACCAGCAGATGAGGGAGGCGTGCATTCCGGCAGC
CAACGGTCACTTCTCGGCGAAAGCGCTCGCGATCATGTACGATAGCTTCC
TGGAGTCTCTGGGCCTTAGCGATGGGCATACCCGTCGTTCGTGCGGAGAT
CACCGCAGCCGCAGCGGCGGCGGAGGGGTTGTCGGTGTCAATGGTGAAAA
CGACAACCTGCTGTTGAGCCGGGCAGCAGTGAACGAGATGCGGTCGTATC
AGGTAATGAGGGAGGCGTGCATTCCGGCAGCCAACGGTCACTTCTCGGCG
AAAGCGCTCGCGATCATGTACGATAGCTTCCTGGAGTCTCTGGGCCTTAG
CGATGGGCATACCCGTCGTTCGTGCGGAGATCACCGCAGCCGCAGCGGCG
GCGGAGGGGTTGTCGGTGTCAATGGTGAAAACGACAACCTGCTGTTGAGC
CGGGCAGCAGTGAACGAGATGCGGTCGTATCAGGTA
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