mRNA_H-paniculata_contig21050.5503.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig21050.5503.1 vs. uniprot
Match: D8LNP4_ECTSI (PIH1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNP4_ECTSI) HSP 1 Score: 296 bits (757), Expect = 7.460e-93 Identity = 151/230 (65.65%), Postives = 183/230 (79.57%), Query Frame = 1
Query: 1 LMLMKETNPAEFEQYIQMAADAAKLATEQPEVFASLVGGGGTGLDHDQGALTPARVEQLRAMEAAAELTGT-KIKGHEGKG---EINIPGTGKTTDSGGVKTKTQGIMISPRPGFVIKSKVMGPGIKVFINICQHERIGKSEMIKKLDEEGNEVEGLNIPMSVGPPSVDKDNAGAECVVYDVIINPNAVEECKADKTGARRDWLCQLALQSVMRKHECRLDNKYKLPKLT 678
LM +K+T+P +F +Y+QMAADAAKLA E+P+VF L+ G G D D LT A+ E+ RAM+AA+ELTG K KG G +IN+PG G +GGVK KT GI+ISPRPGFVIK+K++ G+KVF+N+CQHERIG+S M+KKLD+EG EVEGLNIPMSVGPPSVDKDNAG EC+VYDVIINP +EEC ADKTG +RDW+C LA+QSVM KH+CRLD KYKLPKLT
Sbjct: 70 LMRLKDTDPDQFAEYVQMAADAAKLAEERPDVFEQLMRGDGAAGDED---LTAAQAEKRRAMDAASELTGANKRKGDSKDGVDMDINLPG-GAKLGAGGVKDKTNGIVISPRPGFVIKTKLVDKGMKVFVNVCQHERIGESSMVKKLDKEGQEVEGLNIPMSVGPPSVDKDNAGLECIVYDVIINPKTIEECGADKTGGQRDWVCHLAMQSVMSKHDCRLDPKYKLPKLT 295
BLAST of mRNA_H-paniculata_contig21050.5503.1 vs. uniprot
Match: A0A835ZG52_9STRA (Pre-RNA processing PIH1/Nop17-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG52_9STRA) HSP 1 Score: 168 bits (425), Expect = 3.070e-45 Identity = 95/214 (44.39%), Postives = 129/214 (60.28%), Query Frame = 1
Query: 46 IQMAADAAKLATEQPEVFASL--VGGGGTGLDHDQGALTPARVEQLRAMEAAAELTGTKIKGHEGKGEINIPGTGKTTDSGGVKTKTQGIMISPRPGFVIKSKVMGPGIKVFINICQHERIGKSEMIKKLDEE-GNEVEGLNIPMSVGPPSVDKDNAGAECVVYDVIINPNAVEECKADKTGARRDWLCQLALQSVMRKHECRLDNKYKLPKLT 678
I AA A L PE FA L + G G A A +E L A+EAA E +GE+++PG G ++G VK K G+ ++P PGFV+K+K + G KVF+N+C + IG K+LDE+ G EVE +N+P+SVGPP D AG VYDV++NP +EE AD+TGA+RD++C +A + V RKH+CRLD +YKLPK T
Sbjct: 5 IGFAAKLAALQQSDPEAFAQLAQLASGDAGSSAQGPASGAALLEALAALEAAGES----------RGELDLPGGGVLGETG-VKQKDAGVKMTPDPGFVVKTKELDTGCKVFLNVCSSDLIGVPGPCKRLDEDTGEEVEVINMPVSVGPPREYADKAGGAATVYDVVVNPKVLEEVDADRTGAQRDFVCHMAREYVERKHKCRLDERYKLPKTT 207
BLAST of mRNA_H-paniculata_contig21050.5503.1 vs. uniprot
Match: A0A7S2B8J4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B8J4_9STRA) HSP 1 Score: 155 bits (391), Expect = 3.070e-40 Identity = 92/231 (39.83%), Postives = 131/231 (56.71%), Query Frame = 1
Query: 10 MKETNPAEFEQYIQMAADAAKLATEQPEVFASLVGGGGTGLDHDQGALTPARVEQLRAMEAAAELTGTKIKGHEGKGEINIPGTGKTTDSGGVK-TKTQGIMISPRPGFVIKSKVM-----GPGI--KVFINICQHERIGKSEMIKKLDEEGNEVEGLNIPMSVGPPSVDKDNAGAECVVYDVIINPNAVEECKADKTGARRDWLCQLALQSVMRKHECRLDNKYKLPKLT 678
++ +PA FE+ +Q AA A++AT E L + AA + G EG + +PG K G +K T GI I+P PGFVIK+K + PG KVFIN+CQHE + K M K+L++EG EVEGLN+P+S+GPP D G + +VYD +++P+ ++E K D+TG ++++LCQLALQ V +K++C LD KYKLPK T
Sbjct: 51 LRAQDPAAFEEMMQAAALQAQMATNPDEA--------------------------LGGLHAAMQAQHAAKVGEEG---VQLPGDKKMGLDGTMKQTNEAGIDITPEPGFVIKTKRVDQAGTAPGAVGKVFINLCQHEGVEKPVMKKRLNDEGEEVEGLNVPLSIGPPRACDDAKGVKAIVYDCVVHPSVIDESKEDETGNQQNFLCQLALQYVEQKYKCELDRKYKLPKAT 252
BLAST of mRNA_H-paniculata_contig21050.5503.1 vs. uniprot
Match: A0A2R5GMS9_9STRA (Protein kintoun n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GMS9_9STRA) HSP 1 Score: 150 bits (378), Expect = 1.070e-38 Identity = 70/142 (49.30%), Postives = 100/142 (70.42%), Query Frame = 1
Query: 250 IPGTGKTTDSGGVKTKTQGIMISPRPGFVIKSKVMGPGIKVFINICQHERIGKSEMIKKLDEEGNEVEGLNIPMSVGPPSVDKDNAGAECVVYDVIINPNAVEECKADKTGARRDWLCQLALQSVMRKHECRLDNKYKLPKL 675
+PG GK GV +G+ I P+ GFVIK++ K+FIN+CQ E I K+ M K+L E+G+E EGL++P+S+GPP D+DNAG C+VYD+I+NP + + DKTGA R++LC+LAL + +K++C +D KYKLPKL
Sbjct: 91 LPGGGKKLGESGVTEDDEGVRIVPKAGFVIKTRT-DKDEKIFINVCQSEAIQKTSMRKQLAEDGSEQEGLHVPLSLGPPREDRDNAGKSCIVYDIIVNPEVLVRSREDKTGASRNFLCELALGYIEQKYKCAVDYKYKLPKL 231
BLAST of mRNA_H-paniculata_contig21050.5503.1 vs. uniprot
Match: A0A7S3HLE1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HLE1_9STRA) HSP 1 Score: 140 bits (353), Expect = 6.250e-38 Identity = 67/125 (53.60%), Postives = 89/125 (71.20%), Query Frame = 1
Query: 301 QGIMISPRPGFVIKSKVMGPGIKVFINICQHERIGKSEMIKKLDEEGNEVEGLNIPMSVGPPSVDKDNAGAECVVYDVIINPNAVEECKADKTGARRDWLCQLALQSVMRKHECRLDNKYKLPKL 675
+GI I+P GF K+ + G+KVFIN+ QHE I + KKLD++G EVEG+NIPMSVG P +D GA+CVVYD+I+NP V E ADKTG RD++CQL +Q + +K++ LD +YKLPKL
Sbjct: 90 KGITITPSAGFSYKTSRVADGLKVFINMAQHELIDAPAIKKKLDDKGEEVEGMNIPMSVGQPRFSEDKKGAKCVVYDIIVNPIVVTEATADKTGKYRDFICQLGMQYLEQKYKEELDKRYKLPKL 214
BLAST of mRNA_H-paniculata_contig21050.5503.1 vs. uniprot
Match: A0A7S3ZZ74_9STRA (Hypothetical protein (Fragment) n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZZ74_9STRA) HSP 1 Score: 130 bits (327), Expect = 1.530e-31 Identity = 81/224 (36.16%), Postives = 119/224 (53.12%), Query Frame = 1
Query: 61 DAAKLATEQPEVFASLVGGG--GTGLDHDQGAL-TPARVEQLRAMEAAAELTGTKIKGHEGKGEINIPGTGKTTDSGGVKTKT--QGIMISPRPGFVIKS------------KVMGPGI--KVFINICQHERIGKSEMIKKLDEEGNEVEGLNIPMSVGPPSVDKDNAGAECVVYDVIINPNAVEECKADKTGARRDWLCQLALQSVMRKHECRLDNKYKLPKL 675
+ ++L PE FA L+ G G D G L A+ + A A E + + E+ +PG G+ +GG GI I P PGFV+K+ + G G K F+N+C +G + K+LD EGNEVEG+++P+S+GPP DN G +V D ++NP + EC D+TGA+RD++CQLAL V +K++ LD KYKLP++
Sbjct: 100 ELSELKARDPEAFAELMQAALSGEGADDKVGELWEKAKQGKAPAPAGAPERVSRPARAGD---ELELPG-GRVLGAGGATRPATEDGIRIVPTPGFVLKTTGTQKAPEGGGIREAGAGAPQKYFVNVCSAAAVGAPKPTKRLDNEGNEVEGVSVPVSIGPPRGCADNKGTASIVVDCVVNPTVLAECVNDETGAQRDFICQLALTYVEQKYKLELDRKYKLPRM 319
BLAST of mRNA_H-paniculata_contig21050.5503.1 vs. uniprot
Match: A0A482SP74_9ARCH (PIH1 domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SP74_9ARCH) HSP 1 Score: 128 bits (322), Expect = 2.800e-31 Identity = 58/121 (47.93%), Postives = 81/121 (66.94%), Query Frame = 1
Query: 313 ISPRPGFVIKSKVMGPGIKVFINICQHERIGKSEMIKKLDEEGNEVEGLNIPMSVGPPSVDKDNAGAECVVYDVIINPNAVEECKADKTGARRDWLCQLALQSVMRKHECRLDNKYKLPKL 675
I+P GF K+ + KVFINI HE IG+ +M KKLD EG EVEGLN+PMSVG D D G C VYD++++ + + +C D TG R+++CQL +QS+ +K+ +LD +YK+PKL
Sbjct: 3 ITPTAGFSYKTYTIPEKSKVFINITHHEAIGEPQMAKKLDAEGQEVEGLNVPMSVGTGRADADKKGQSCTVYDIVVHHSVLNDCTKDPTGKYREFICQLGIQSIEQKYSIQLDKRYKIPKL 123
BLAST of mRNA_H-paniculata_contig21050.5503.1 vs. uniprot
Match: A0A8J2T170_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2T170_9STRA) HSP 1 Score: 130 bits (327), Expect = 3.020e-31 Identity = 81/224 (36.16%), Postives = 119/224 (53.12%), Query Frame = 1
Query: 61 DAAKLATEQPEVFASLVGGG--GTGLDHDQGAL-TPARVEQLRAMEAAAELTGTKIKGHEGKGEINIPGTGKTTDSGGVKTKT--QGIMISPRPGFVIKS------------KVMGPGI--KVFINICQHERIGKSEMIKKLDEEGNEVEGLNIPMSVGPPSVDKDNAGAECVVYDVIINPNAVEECKADKTGARRDWLCQLALQSVMRKHECRLDNKYKLPKL 675
+ ++L PE FA L+ G G D G L A+ + A A E + + E+ +PG G+ +GG GI I P PGFV+K+ + G G K F+N+C +G + K+LD EGNEVEG+++P+S+GPP DN G +V D ++NP + EC D+TGA+RD++CQLAL V +K++ LD KYKLP++
Sbjct: 71 ELSELQARDPEAFAELMQAALSGEGADDKVGELWEKAKQGKAPAPAGAPERVSRPARAGD---ELELPG-GRVLGAGGATRPATEDGIRIVPTPGFVLKTTGTQKAPEGGGIREAGAGAPQKYFVNVCSAAAVGAPKPTKRLDNEGNEVEGVSVPVSIGPPRGCADNKGTASIVVDCVVNPTVLAECVNDETGAQRDFICQLALTYVEQKYKLELDRKYKLPRM 290
BLAST of mRNA_H-paniculata_contig21050.5503.1 vs. uniprot
Match: A0A7S1U2U8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U2U8_9STRA) HSP 1 Score: 125 bits (313), Expect = 3.810e-31 Identity = 78/246 (31.71%), Postives = 117/246 (47.56%), Query Frame = 1
Query: 10 MKETNPAEFEQYIQMAADAAKLATEQPEVFASLVGGGGTGLDHDQGALTPARVEQLRAMEAAAELTGTKIKGHEGKGEINIPGT-GKTTDSGGVKTKTQGIMISPRPGFVIKSKVMG-----------------------PGIKVFINICQHERIGKSEMIKKLDEEGNEVEGLNIPMSVGPPSVDKDNAGAECVVYDVIINPNAVEECKADKTGARRDWLCQLALQSVMRKHECRLDNKYKLPKL 675
+ +P EFE +++ D AKL+ PE FA ++++ A + K G I +PG G S G + K QG I P PGFV+K++ +G G KVF+NIC E I +K+LD G EVEGL+IP+SVG D+ ++C V DVI++ ++ K D +G ++D+L L+LQ V K++ RLD +YKLP++
Sbjct: 32 LSREHPEEFEAFMKATEDMAKLSQADPEAFAKFQ--------------ADPKLQEAYGATLAQQFQAAKDAATPSNGGIAMPGAPGSVLGSKGTEAKQQGKRIVPEPGFVVKTRSLGGAGDALAEEAAGGVGMVASSSDEEGRKVFVNICVSEAIAAPRTVKRLDANGQEVEGLSIPVSVGELRRAADHKASQCHVCDVIVSQKVYDDAKEDASGGQKDFLVGLSLQYVESKYKLRLDRRYKLPRM 263
BLAST of mRNA_H-paniculata_contig21050.5503.1 vs. uniprot
Match: K3WAQ8_GLOUD (PIH1 domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WAQ8_GLOUD) HSP 1 Score: 126 bits (317), Expect = 5.610e-30 Identity = 58/143 (40.56%), Postives = 94/143 (65.73%), Query Frame = 1
Query: 250 IPGTGKTTDSGGVKTKTQGIMISPRPGFVIKSKVMGPGIKVFINICQHERIGKSEMIKKLDEEGNEVEGLNIPMSVGPPSVDKDNAGAECVVYDVIINPNAVEECKADKTGARRDWLCQLALQSVMRKHECRLDNKYKLPKLT 678
PG K ++ G+ K +G+ I PGFV+K+ + G KVF+N+C + I KKLD+EGNE EG+++P+S+G KD G + +DV +N VE+CK DKTG+ R+++C+LA++ + +K++ +LD +YKLP+L+
Sbjct: 85 FPGN-KVMEASGLAAKQEGVYIDVHPGFVMKTSELKSGKKVFVNVCYSDEIQTFSQQKKLDDEGNEQEGIHVPLSLGALHEVKDKKGTTSLAFDVAVNTQVVEDCKIDKTGSFRNFVCELAIEYIDQKYKVKLDARYKLPRLS 226 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig21050.5503.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig21050.5503.1 >prot_H-paniculata_contig21050.5503.1 ID=prot_H-paniculata_contig21050.5503.1|Name=mRNA_H-paniculata_contig21050.5503.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=226bp MLMKETNPAEFEQYIQMAADAAKLATEQPEVFASLVGGGGTGLDHDQGALback to top mRNA from alignment at H-paniculata_contig21050:793..3998+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig21050.5503.1 ID=mRNA_H-paniculata_contig21050.5503.1|Name=mRNA_H-paniculata_contig21050.5503.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3206bp|location=Sequence derived from alignment at H-paniculata_contig21050:793..3998+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig21050:793..3998+ >mRNA_H-paniculata_contig21050.5503.1 ID=mRNA_H-paniculata_contig21050.5503.1|Name=mRNA_H-paniculata_contig21050.5503.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1356bp|location=Sequence derived from alignment at H-paniculata_contig21050:793..3998+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |