mRNA_H-paniculata_contig21020.5489.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig21020.5489.1
Unique NamemRNA_H-paniculata_contig21020.5489.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig21020.5489.1 vs. uniprot
Match: A0A6H5JSX2_9PHAE (Non-specific serine/threonine protein kinase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSX2_9PHAE)

HSP 1 Score: 300 bits (769), Expect = 8.900e-88
Identity = 253/422 (59.95%), Postives = 277/422 (65.64%), Query Frame = 1 
Query:    1 YLDTAAQHATNKLAGRRSSSGAXXXXXXXXXXXPAGPVQVYRPHNASTFTAAVYLPESLSQAIYLPTQKITTLYPGAGXXXXXXXXXXXXAEWSGGKYGTRGEGGDSLGEEDCVDVRLDSRALACEPALLQTITGIHTNPRDARRAMAIVEQTEADGPDQPSFAYANYYGYGGGYTPTVIAAAAAG-----------GVPGAGGINGSSRGVWEAAARGGGAGLGGAGWADAAALVRRAKALGIPPLPPNLGAVRAPNGAKYSHYLLFAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-YEMGATGGGRRVDWKPQQGVLVASLREHGGAVNRLALSQDQAFFVSASSDGTCKVWELRGMDHAVSPQSRATYSRQGGRLVDLCMVDNSHSVASASSDGTVHV 1230
            Y+DTAAQHA NK  GR      XXX          G V       A   ++ VYLPESLSQAIY+PTQKITTL+PG G             + S G              ED +D+RL S AL+  PALLQ++TG+HTN  DARRAMA+VE  + DG    S  + N   Y                          G P        S   WE +  GG  G       DA AL+RRAKALG+PPLPP+LGAVRAPNGAKYSHYLL +GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  Y +    G RR DW+P+QGVLVASLREHGGAVNRLALSQDQAFFVSASSD TCKVWELRGMDH VSPQSRATYSRQ GRL+DLCMVDNSHSVASASSDGTVHV
Sbjct:  862 YIDTAAQHAANK--GRXXXXXXXXX----------GSV-------AGERSSPVYLPESLSQAIYVPTQKITTLHPGVGAVAVAVATALASGQASSGDXXXXXXXXXXXXXEDDIDLRLSSSALSATPALLQSVTGMHTNAVDARRAMALVEHADVDGAAGSSGRHDNGSSYAASXXXXXXXXXXXXXXXXXXXXXXXGKP--------SAPAWEVSRVGGVGGRPD----DAVALLRRAKALGVPPLPPDLGAVRAPNGAKYSHYLLDSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEQYSLQYEHGSRRPDWRPRQGVLVASLREHGGAVNRLALSQDQAFFVSASSDSTCKVWELRGMDHTVSPQSRATYSRQSGRLLDLCMVDNSHSVASASSDGTVHV 1252
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BLAST of mRNA_H-paniculata_contig21020.5489.1 vs. uniprot
Match: D8LRQ5_ECTSI (Non-specific serine/threonine protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRQ5_ECTSI)

HSP 1 Score: 284 bits (727), Expect = 4.860e-82
Identity = 246/427 (57.61%), Postives = 275/427 (64.40%), Query Frame = 1 
Query:    1 YLDTAAQHATNKLAGRRSSSGAXXXXXXXXXXXPAGPVQVYRPHNASTFTAAVYLPESLSQAIYLPTQKITTLYPGAGXXXXXXXXXXXXAEWSGGKYGTRGEGGDSLGEEDCVDVRLDSRALACEPALLQTITGIHTNPRDARRAMAIVEQTEADGPDQPSFAYANYYGYGGGYTPTVIAAAAAGGVPGAGGINGSSRGVWEAAARGGGAGLGGAGWADAAALVRRAK----------------ALGIPPLPPNLGAVRAPNGAKYSHYLLFAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-YEMGATGGGRRVDWKPQQGVLVASLREHGGAVNRLALSQDQAFFVSASSDGTCKVWELRGMDHAVSPQSRATYSRQGGRLVDLCMVDNSHSVASASSDGTVHV 1230
            Y+DTAAQHA NK  G       X            G V       A   ++ VYLPESLSQAIY+PTQKITTL+PG G             + + G  G R  GGD  GE+D +D+RL S AL+  PALLQ++TG+HTN  DARRAMA+VEQ + DG    S  + N                                    A++R    G+G    A A ++ R                   ALG+PPLPP+LGAVRAPNGAKYSHYLL +GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX Y      G RR DW+P+QGVLVASLREHGGAVNRLALSQDQAFFVSASSD TCKVWELRGMDH V+PQSRATYSRQ GRL+DLCMVDNSHSVASASSDGTVHV
Sbjct:  595 YIDTAAQHAANKGRGXXXXXXXX------------GSV-------AGERSSPVYLPESLSQAIYVPTQKITTLHPGVGAVAVAVAKALASGQATSGD-GRRDAGGDEGGEDD-IDLRLSSAALSATPALLQSVTGMHTNAVDARRAMALVEQADVDGAAGSSGRHDNXXXXXXXXXXXXX-------------XXXXXXXXXXASSR---QGVGVKPSAPAGSVSRAXXXXXXXXXXXXXXXXXXALGVPPLPPDLGAVRAPNGAKYSHYLLDSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQYSSQYEHGSRRPDWRPRQGVLVASLREHGGAVNRLALSQDQAFFVSASSDSTCKVWELRGMDHTVNPQSRATYSRQSGRLLDLCMVDNSHSVASASSDGTVHV 984
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BLAST of mRNA_H-paniculata_contig21020.5489.1 vs. uniprot
Match: A0A7S1UGT5_9STRA (Non-specific serine/threonine protein kinase (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UGT5_9STRA)

HSP 1 Score: 107 bits (267), Expect = 2.490e-24
Identity = 51/91 (56.04%), Postives = 66/91 (72.53%), Query Frame = 1 
Query:  961 WKPQQ-GVLVASLREHGGAVNRLALSQDQAFFVSASSDGTCKVWELRGMDHAVSPQSRATYSRQGGRLVDLCMVDNSHSVASASSDGTVHV 1230
            WKP   GVL+AS+ EH G V+ L +SQDQ F VS  +DGT ++WE RG+D  V P+S A Y+RQGG +    M+DNSHSVA+ S++GTVHV
Sbjct:   42 WKPATPGVLIASMEEHEGPVHALCVSQDQRFIVSCGADGTARIWETRGLDRHVVPRSAAVYARQGGPITCGAMLDNSHSVATGSTNGTVHV 132
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BLAST of mRNA_H-paniculata_contig21020.5489.1 vs. uniprot
Match: A0A7S3JYX0_9STRA (Non-specific serine/threonine protein kinase n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JYX0_9STRA)

HSP 1 Score: 116 bits (290), Expect = 3.170e-24
Identity = 57/95 (60.00%), Postives = 72/95 (75.79%), Query Frame = 1 
Query:  949 RRVDWKPQQGVLVASLREHGGAVNRLALSQDQAFFVSASSDGTCKVWELRGMDHAVSPQSRATYSRQ-GGRLVDLCMVDNSHSVASASSDGTVHV 1230
            RR+DW+P+ GV+VA+  EH GAV RLA++QDQ+FF SAS DGT +VW  RG+D  +S +S A Y+ Q GG L D C VDNS SVA+A S+GTVHV
Sbjct: 1199 RRLDWRPKAGVVVAAFYEHRGAVARLAVAQDQSFFASASHDGTARVWVTRGLDRGISHRSVAIYTGQNGGALTDACAVDNSRSVATACSNGTVHV 1293
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BLAST of mRNA_H-paniculata_contig21020.5489.1 vs. uniprot
Match: A0A5D6XP64_9STRA (Non-specific serine/threonine protein kinase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XP64_9STRA)

HSP 1 Score: 115 bits (288), Expect = 5.870e-24
Identity = 79/207 (38.16%), Postives = 102/207 (49.28%), Query Frame = 1 
Query:  670 LVRRAKALGIPPLPPNLGAVRAPNGAKYSHYLLFAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYEMGATGGGRRVD--------------------WKPQQGVLVASLREHGGAVNRLALSQDQAFFVSASSDGTCKVWELRGMDHAVSPQSRATYSRQGGRLVDLCMVDNSHSVASASSDGTVHV 1230
            L+ R  ALGIPPLPP+LG++R P+G+ YS Y              XXXXXXX                                Y   +  G                         W+P+  VLVA L EH GAVNR+  +QD +F  SAS+DGT K+W +R M H+++  SR TY  QGG L D+ +++NSHSVASASS G+VHV
Sbjct: 1311 LLARLTALGIPPLPPDLGSLRQPDGSYYSIYSHPLSPYTTAQSGLXXXXXXXPAAPAGIERTNMVTAMGIQSTSANGGMYNVPVYTSSSGAGNIATSPAPPASTSSPGSFTSYSYRGWRPRMNVLVAELAEHTGAVNRIGAAQDFSFLASASNDGTVKLWSIRSMQHSINQGSRCTYDGQGGVLTDMIVLENSHSVASASSSGSVHV 1517
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BLAST of mRNA_H-paniculata_contig21020.5489.1 vs. uniprot
Match: A0A8K1C2E6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C2E6_PYTOL)

HSP 1 Score: 115 bits (287), Expect = 7.870e-24
Identity = 52/91 (57.14%), Postives = 70/91 (76.92%), Query Frame = 1 
Query:  958 DWKPQQGVLVASLREHGGAVNRLALSQDQAFFVSASSDGTCKVWELRGMDHAVSPQSRATYSRQGGRLVDLCMVDNSHSVASASSDGTVHV 1230
            +W+P+Q VLVA L EH GAV+R+  +QD +F  SAS DGT K+W +R M+H+++  SR+TY  Q G L D+ ++DNSHSVASASS+GTVHV
Sbjct: 1390 NWRPRQNVLVAELAEHSGAVHRIGAAQDFSFLASASKDGTVKLWSIRSMNHSINQGSRSTYDGQAGVLTDMVVLDNSHSVASASSNGTVHV 1480
[Close]
BLAST of mRNA_H-paniculata_contig21020.5489.1 vs. uniprot
Match: K3WTL6_GLOUD (Non-specific serine/threonine protein kinase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WTL6_GLOUD)

HSP 1 Score: 112 bits (279), Expect = 8.030e-23
Identity = 50/90 (55.56%), Postives = 69/90 (76.67%), Query Frame = 1 
Query:  961 WKPQQGVLVASLREHGGAVNRLALSQDQAFFVSASSDGTCKVWELRGMDHAVSPQSRATYSRQGGRLVDLCMVDNSHSVASASSDGTVHV 1230
            W+P++ VLVA L EH GAVNR+  +QD +F  S+S+DGT K+W +R M H+++  SR TY  QGG L D+ +++NSHSVASASS+G+VHV
Sbjct: 1081 WRPRKNVLVAELAEHTGAVNRIGAAQDFSFLASSSNDGTVKLWSIRSMQHSINQGSRCTYDGQGGVLTDMVVLENSHSVASASSNGSVHV 1170
[Close]
BLAST of mRNA_H-paniculata_contig21020.5489.1 vs. uniprot
Match: A0A6G0XCA0_9STRA (Non-specific serine/threonine protein kinase n=2 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XCA0_9STRA)

HSP 1 Score: 111 bits (278), Expect = 1.090e-22
Identity = 45/91 (49.45%), Postives = 69/91 (75.82%), Query Frame = 1 
Query:  958 DWKPQQGVLVASLREHGGAVNRLALSQDQAFFVSASSDGTCKVWELRGMDHAVSPQSRATYSRQGGRLVDLCMVDNSHSVASASSDGTVHV 1230
            +W+P++ V+VA L EH G VNR+ ++ D +F  SASSDG  K+W ++G+ H+++P SR TY  +GG L D+ + D+SHS+A++SS+GTVHV
Sbjct: 1191 EWRPRENVMVAELNEHSGPVNRIGVAPDGSFLASASSDGVVKIWSVKGLSHSINPSSRGTYDARGGVLTDMVVCDHSHSIATSSSNGTVHV 1281
[Close]
BLAST of mRNA_H-paniculata_contig21020.5489.1 vs. uniprot
Match: A0A484DWH5_BRELC (Non-specific serine/threonine protein kinase n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DWH5_BRELC)

HSP 1 Score: 111 bits (278), Expect = 1.140e-22
Identity = 50/91 (54.95%), Postives = 69/91 (75.82%), Query Frame = 1 
Query:  958 DWKPQQGVLVASLREHGGAVNRLALSQDQAFFVSASSDGTCKVWELRGMDHAVSPQSRATYSRQGGRLVDLCMVDNSHSVASASSDGTVHV 1230
            +W+P++ VLVA L EH GAV R++ +QD +F  SAS+DGT K+W +R + H+V+  SR TY  QGG + D+ ++ NSHSVASASSDG+VHV
Sbjct: 1516 NWQPRKSVLVAELAEHSGAVTRISAAQDYSFLASASNDGTVKIWSVRSLQHSVNQGSRCTYDGQGGVITDMKVLTNSHSVASASSDGSVHV 1606
[Close]
BLAST of mRNA_H-paniculata_contig21020.5489.1 vs. uniprot
Match: A0A2D4CC38_PYTIN (Non-specific serine/threonine protein kinase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CC38_PYTIN)

HSP 1 Score: 110 bits (275), Expect = 1.630e-22
Identity = 51/92 (55.43%), Postives = 69/92 (75.00%), Query Frame = 1 
Query:  958 DWKPQQGVLVASLREHGGAVNRLALSQDQAFFVSASSDGTCKVWEL-RGMDHAVSPQSRATYSRQGGRLVDLCMVDNSHSVASASSDGTVHV 1230
            +W+P++ +LVA L EH GAVNR+  +QD +F  SAS+DGT K+W + + M H+V+  SR TY  QGG L D+ ++DN HSVASASS+GTVHV
Sbjct:  131 NWRPRKNILVAELAEHSGAVNRIGAAQDYSFLASASNDGTVKLWSIGKSMQHSVNQGSRCTYDGQGGVLTDMIVLDNCHSVASASSNGTVHV 222
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig21020.5489.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JSX2_9PHAE8.900e-8859.95Non-specific serine/threonine protein kinase n=1 T... [more]
D8LRQ5_ECTSI4.860e-8257.61Non-specific serine/threonine protein kinase n=1 T... [more]
A0A7S1UGT5_9STRA2.490e-2456.04Non-specific serine/threonine protein kinase (Frag... [more]
A0A7S3JYX0_9STRA3.170e-2460.00Non-specific serine/threonine protein kinase n=1 T... [more]
A0A5D6XP64_9STRA5.870e-2438.16Non-specific serine/threonine protein kinase n=1 T... [more]
A0A8K1C2E6_PYTOL7.870e-2457.14Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
K3WTL6_GLOUD8.030e-2355.56Non-specific serine/threonine protein kinase n=1 T... [more]
A0A6G0XCA0_9STRA1.090e-2249.45Non-specific serine/threonine protein kinase n=2 T... [more]
A0A484DWH5_BRELC1.140e-2254.95Non-specific serine/threonine protein kinase n=1 T... [more]
A0A2D4CC38_PYTIN1.630e-2255.43Non-specific serine/threonine protein kinase n=1 T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig21020contigH-paniculata_contig21020:641..4282 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score290.0
Seed ortholog evalue1.7e-75
Seed eggNOG ortholog2880.D8LRQ5
KEGG koko:K08333
KEGG Pathwayko04136,ko04138,ko04140,ko04371,map04136,map04138,map04140,map04371
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005643,GO:0005737,GO:0005768,GO:0005770,GO:0005942,GO:0006464,GO:0006468,GO:0006605,GO:0006623,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006886,GO:0006914,GO:0007034,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0012505,GO:0015031,GO:0015833,GO:0016020,GO:0016192,GO:0016236,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019538,GO:0019898,GO:0030242,GO:0031410,GO:0031967,GO:0031975,GO:0031982,GO:0032507,GO:0032991,GO:0033036,GO:0033365,GO:0034067,GO:0034271,GO:0034272,GO:0034613,GO:0035032,GO:0036211,GO:0042886,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044232,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0045053,GO:0045184,GO:0045185,GO:0045324,GO:0046907,GO:0051179,GO:0051234,GO:0051235,GO:0051641,GO:0051649,GO:0051651,GO:0061695,GO:0061919,GO:0065007,GO:0065008,GO:0070727,GO:0071561,GO:0071702,GO:0071704,GO:0071705,GO:0072594,GO:0072665,GO:0072666,GO:0097708,GO:0098796,GO:0140096,GO:1901564,GO:1902494,GO:1990234
EggNOG free text desc.autophagy of peroxisome
EggNOG OGsKOG1240@1,KOG1240@2759
EC2.7.11.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01001,ko04131
Exons5
Model size1232
Cds size1230
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig21020.5489.1prot_H-paniculata_contig21020.5489.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig21020 641..4282 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929556.160073-CDS-H-paniculata_contig21020:640..7871622929556.160073-CDS-H-paniculata_contig21020:640..787Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig21020 641..787 -
1691480912.2151701-CDS-H-paniculata_contig21020:640..7871691480912.2151701-CDS-H-paniculata_contig21020:640..787Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig21020 641..787 -
1622929556.1757927-CDS-H-paniculata_contig21020:1809..21221622929556.1757927-CDS-H-paniculata_contig21020:1809..2122Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig21020 1810..2122 -
1691480912.2249281-CDS-H-paniculata_contig21020:1809..21221691480912.2249281-CDS-H-paniculata_contig21020:1809..2122Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig21020 1810..2122 -
1622929556.197456-CDS-H-paniculata_contig21020:2188..22271622929556.197456-CDS-H-paniculata_contig21020:2188..2227Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig21020 2189..2227 -
1691480912.2327526-CDS-H-paniculata_contig21020:2188..22271691480912.2327526-CDS-H-paniculata_contig21020:2188..2227Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig21020 2189..2227 -
1622929556.2186027-CDS-H-paniculata_contig21020:3046..33741622929556.2186027-CDS-H-paniculata_contig21020:3046..3374Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig21020 3047..3374 -
1691480912.2405846-CDS-H-paniculata_contig21020:3046..33741691480912.2405846-CDS-H-paniculata_contig21020:3046..3374Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig21020 3047..3374 -
1622929556.230734-CDS-H-paniculata_contig21020:3879..42821622929556.230734-CDS-H-paniculata_contig21020:3879..4282Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig21020 3880..4282 -
1691480912.2482865-CDS-H-paniculata_contig21020:3879..42821691480912.2482865-CDS-H-paniculata_contig21020:3879..4282Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig21020 3880..4282 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig21020.5489.1

>prot_H-paniculata_contig21020.5489.1 ID=prot_H-paniculata_contig21020.5489.1|Name=mRNA_H-paniculata_contig21020.5489.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=410bp
YLDTAAQHATNKLAGRRSSSGASSSSSNSSNSSPAGPVQVYRPHNASTFT
AAVYLPESLSQAIYLPTQKITTLYPGAGAGAAAAAAAAAAAEWSGGKYGT
RGEGGDSLGEEDCVDVRLDSRALACEPALLQTITGIHTNPRDARRAMAIV
EQTEADGPDQPSFAYANYYGYGGGYTPTVIAAAAAGGVPGAGGINGSSRG
VWEAAARGGGAGLGGAGWADAAALVRRAKALGIPPLPPNLGAVRAPNGAK
YSHYLLFAGGGGGGGGTSAGSGGGGLSGSSSSAAVAAAAAAAAAAAAAAA
QAAQQQQYEMGATGGGRRVDWKPQQGVLVASLREHGGAVNRLALSQDQAF
FVSASSDGTCKVWELRGMDHAVSPQSRATYSRQGGRLVDLCMVDNSHSVA
SASSDGTVHV
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mRNA from alignment at H-paniculata_contig21020:641..4282-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig21020.5489.1 ID=mRNA_H-paniculata_contig21020.5489.1|Name=mRNA_H-paniculata_contig21020.5489.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3642bp|location=Sequence derived from alignment at H-paniculata_contig21020:641..4282- (Halopteris paniculata Hal_grac_a_UBK monoicous)
TACTTGGACACCGCGGCCCAGCACGCAACGAACAAACTAGCCGGCAGACG
ATCCAGCAGCGGCGCCAGCAGCAGCAGCAGCAACAGCAGCAACAGCAGCC
CCGCGGGACCAGTTCAAGTATACAGACCACACAACGCTTCTACCTTTACT
GCCGCCGTGTATCTCCCAGAGTCCTTGTCTCAAGCGATATACCTCCCGAC
CCAGAAGATCACCACCCTGTATCCAGGCGCTGGAGCCGGCGCGGCAGCCG
CGGCAGCAGCGGCGGCAGCTGCGGAGTGGTCTGGGGGAAAATATGGTACC
CGTGGGGAAGGAGGTGATAGCTTGGGGGAGGAGGATTGCGTGGACGTGAG
GTTGGATTCGCGGGCTCTCGCTTGCGAGCCGGCCCTGCTTCAGACTATCA
CAGGTCGGGGATAGCATCGTGTGTCAAGTTACTCTAGAAGTAGTTTTTGA
AATAAGATACCGATTACTGTCAGAGTATGGTAGGTTGAATATTTATGTCC
AAGTGGCTGTCTCGTCTGTCTATCTAATGTACACGCTTCGGGACAGATTT
TCTCAACTCTGTAGTCGTGCAGAAATTATGAAAGCGAATTCTAACTGTAC
AGTCAGTGTGCCATTTCCTCTTCAAGTTTGCGAGGGCAGCGAGCGGTCGT
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTATGTGTGTGC
GTGTTTATGTATGTGCGTGTGTGTGTATTTTTATTTTGGTTTGACATGAA
GCAGCACGAGGACAAGAATATGGTGGTGCATTAGGGGAAACTACTAAAAG
TGGCTACATTTTTACTGCAGTATCACAGTCTGCACTAATAGCACATAGTC
AAACCTCGCCTTTTTGTACGTATTCATACCCGCCGTGTTTTGAAATCACA
TGTCGCAGGAATCCACACCAATCCACGGGACGCGAGACGGGCAATGGCTA
TCGTAGAGCAGACCGAAGCGGACGGGCCCGACCAGCCTTCCTTCGCGTAC
GCGAACTACTACGGTTACGGTGGCGGCTACACTCCAACCGTCATCGCCGC
CGCCGCCGCGGGTGGCGTGCCCGGAGCCGGTGGCATCAACGGGAGTTCCA
GAGGGGTATGGGAGGCGGCGGCACGGGGGGGAGGGGCAGGGTTGGGAGGG
GCGGGCTGGGCAGATGCAGCCGCGTTGGTTCGAAGGGCGAAGGCGTTGGG
GATTCCTCCTCTGCCGCCGAATCTTGGTGCTGTGAGGTGAGCAGCGCATT
TTCGAAGAGTTTTAGCTATAGTTTCTGGAGTGGTGTTGGGTGATGGGGGC
GGGGGGAGTGAGGCAGATTAGATCACAAATTAAGTGCTAACCGTGTTTGG
GTCCGAAATTACTGAAGGCAGTAGTAGTGACGAGTAGTGACAGAGAAACC
TGGTTTAATTTTTTGGTTCTTAAGTGTGGTCTTTCGCAAGGCACAATTGA
TGTCGTCTTTTATTACGGGGATGTATTGAGGTGTTGAGGTGTTGAGGTGG
AGGTTGATTTGATCCGTTTTCGGAAATTGGGCCACAGTAAATCGAAGTTG
CTTTTTTCATGCTGGGCTAAGGTAAGGGGCACACCTACGCGCCAGATGTT
CGAATGAACTACGTGGTGCCCGGACCACCCTTTTGTGTATCAATCAAGAC
ACCGTTTTTGTTTCCCGGCACTTGTATACCCCCCCCTCCTCCCGCTCTAC
ACCCTAGGTGCCTGTCCGCTGGCTCATCTGCGCTTCCTCTATAGTGATAC
AATTTTGCTGACAAGTGTACACGATTGAAGTTTGAAGTCAGGTTCATGAC
CTCCGTGTACACCCTCTCCTTCCCTCTCCCGTATTTTCAGACAAATAGCC
ATCGCCTCCCCTACACCTCTATCCTGTTAGTATTAACGTTTTCCTGGACC
CATGATACAATCTTCCCCCCCCCCCCCCCCTCCCTATCCCGCCTTGGTAG
TCGCGCTACTCTTCCCCCACCGGTGTCATCATCCATTTCGCCATCGACCC
CACCTGCATTTGCTGTCGTGTTTGACATGTCTTTGTCCTCTCACTTGAAA
CGAAGAGCCCCGAACGGAGCGAAGTACTCTCACTACCTTCTGTTGTCGGC
AACCGGCGCCCACAACACCAACACAACTTCCACAGCATCTTCGGGAGGGG
GAGGGGGAAGCGCGGGAGGGGGGGGAGGAGGCGGGGGGACTTCTGCCGGT
TCGGGGGGCGGTGGATTATCCGGATCGTCGAGTTCTGCCGCCGTCGCCGC
CGCCGCCGCCGCCGCGGCTGCAGCCGCTGCTGCCGCTGCCCAAGCGGCGC
AACAACAGCAATACGAGATGGGTGCGACCGGCGGTGGTCGGCGAGTGGAC
TGGAAGCCACAGCAGGGCGTTCTTGTCGCATCTTTGAGGGAGCACGGCGG
GGCGGTGAATCGACTTGCGTTGTCACAGGATCAGGCGTTTTTTGTCTCCG
CTTCGTCGGACGGCACTTGCAAGGTGATTGGTTGTCATTTCGACTCGCCG
TAAACTGTGGTGAAACGTTGTATGTGAGTGTGTGTGTGTGTGTGTATGTC
TATGTGGAGAATGTTCTATATAAAAGATTGATTCCCATGAGTGTCTGCGG
AGGATGAACGTATGCTCTGTTATACAGTGGTGTCTCAGGTTGGACGGTGA
GTACGAGAGGGTCACAAGTTCGTGAGTTCAAAGTCGACCTCAATCACAAT
TAAGGCAGGGAAAATGGTGTGTTGAGTAGGCCGCAGAAAGGGTGGAGAGA
CACTTGGCAACCCTTGCGTTGAAATTTTGAAAAGACGATGTGAAAGGTGG
TTGGTCGACCCACAAGCGAGAAAAGAGAAGATGATGATTAAACACTGCGA
AGAAAAAAAGAGAGGGGATCCTCACCGTAAGCCGGTCGAAAGCGACCGCT
CCGACAAGAGAAACCTCTCGCAACTAGCAGAGAGAGTCATCGAGGGGTGA
TTGGGTGTGTAATGTACAGAACACCTAAATAGAATGAGAAATTTTTACAC
GCTGTATATTTGAAGAACGAAACCGTCTAATAATGAAGTAGCTCCGATTA
ATCATTCTATTGATGTATGTATATATATATATATATATATATATATATAT
CGTTATATCGTGTTATGTATTTTTTCCAGTCCAAGGGAGGGGCGGGAGGG
TGTAGAATACCCCAAATGTCATTGGCCATAGTCAGTAGCATCAAATATCC
GTTGTGATGACTTACTTGATCGCACCCCTGGTAAGGATATGCAATGCAGC
TGGCTGGCTTGGATCAAATTGGGTGGAATGGTGTATCATTTTTGTTTAGG
TTGTGGTATGGAGTATTGTGTATATTTGATATTTCTTGAAATCGACTATT
AATAGGGTTCACGGTGACCCATAGTATTGTCATTATCCACAGTCTACTAC
AAGTATTGGGAGGAAAGGAAGGAAGGAAGGAGGTATTATGGGTGCCCTCC
CTTCATGTGCGCATTTGGTAATCGATTGTTTCCGCTGGCCTACAGGTATG
GGAGCTGCGCGGGATGGACCACGCCGTCAGTCCCCAGTCGCGTGCGACGT
ATTCGAGGCAGGGCGGGCGACTGGTGGATTTGTGCATGGTGGACAATTCT
CACTCCGTCGCTTCGGCCTCTTCCGACGGCACTGTTCACGTG
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Coding sequence (CDS) from alignment at H-paniculata_contig21020:641..4282-

>mRNA_H-paniculata_contig21020.5489.1 ID=mRNA_H-paniculata_contig21020.5489.1|Name=mRNA_H-paniculata_contig21020.5489.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2460bp|location=Sequence derived from alignment at H-paniculata_contig21020:641..4282- (Halopteris paniculata Hal_grac_a_UBK monoicous)
TACTTGGACACCGCGGCCCAGCACGCAACGAACAAACTAGCCGGCAGACG
ATCCAGCAGCGGCGCCAGCAGCAGCAGCAGCAACAGCAGCAACAGCAGCC
CCGCGGGACCAGTTCAAGTATACAGACCACACAACGCTTCTACCTTTACT
GCCGCCGTGTATCTCCCAGAGTCCTTGTCTCAAGCGATATACCTCCCGAC
CCAGAAGATCACCACCCTGTATCCAGGCGCTGGAGCCGGCGCGGCAGCCG
CGGCAGCAGCGGCGGCAGCTGCGGAGTGGTCTGGGGGAAAATATGGTACC
CGTGGGGAAGGAGGTGATAGCTTGGGGGAGGAGGATTGCGTGGACGTGAG
GTTGGATTCGCGGGCTCTCGCTTGCGAGCCGGCCCTGCTTCAGACTATCA
CAGTACTTGGACACCGCGGCCCAGCACGCAACGAACAAACTAGCCGGCAG
ACGATCCAGCAGCGGCGCCAGCAGCAGCAGCAGCAACAGCAGCAACAGCA
GCCCCGCGGGACCAGTTCAAGTATACAGACCACACAACGCTTCTACCTTT
ACTGCCGCCGTGTATCTCCCAGAGTCCTTGTCTCAAGCGATATACCTCCC
GACCCAGAAGATCACCACCCTGTATCCAGGCGCTGGAGCCGGCGCGGCAG
CCGCGGCAGCAGCGGCGGCAGCTGCGGAGTGGTCTGGGGGAAAATATGGT
ACCCGTGGGGAAGGAGGTGATAGCTTGGGGGAGGAGGATTGCGTGGACGT
GAGGTTGGATTCGCGGGCTCTCGCTTGCGAGCCGGCCCTGCTTCAGACTA
TCACAGGAATCCACACCAATCCACGGGACGCGAGACGGGCAATGGCTATC
GTAGAGCAGACCGAAGCGGACGGGCCCGACCAGCCTTCCTTCGCGTACGC
GAACTACTACGGTTACGGTGGCGGCTACACTCCAACCGTCATCGCCGCCG
CCGCCGCGGGTGGCGTGCCCGGAGCCGGTGGCATCAACGGGAGTTCCAGA
GGGGTATGGGAGGCGGCGGCACGGGGGGGAGGGGCAGGGTTGGGAGGGGC
GGGCTGGGCAGATGCAGCCGCGTTGGTTCGAAGGGCGAAGGCGTTGGGGA
TTCCTCCTCTGCCGCCGAATCTTGGTGCTGTGAGGAATCCACACCAATCC
ACGGGACGCGAGACGGGCAATGGCTATCGTAGAGCAGACCGAAGCGGACG
GGCCCGACCAGCCTTCCTTCGCGTACGCGAACTACTACGGTTACGGTGGC
GGCTACACTCCAACCGTCATCGCCGCCGCCGCCGCGGGTGGCGTGCCCGG
AGCCGGTGGCATCAACGGGAGTTCCAGAGGGGTATGGGAGGCGGCGGCAC
GGGGGGGAGGGGCAGGGTTGGGAGGGGCGGGCTGGGCAGATGCAGCCGCG
TTGGTTCGAAGGGCGAAGGCGTTGGGGATTCCTCCTCTGCCGCCGAATCT
TGGTGCTGTGAGAGCCCCGAACGGAGCGAAGTACTCTCACTACCTTCTGT
TAGCCCCGAACGGAGCGAAGTACTCTCACTACCTTCTGTTCGCGGGAGGG
GGGGGAGGAGGCGGGGGGACTTCTGCCGGTTCGGGGGGCGGTGGATTATC
CGGATCGTCGAGTTCTGCCGCCGTCGCCGCCGCCGCCGCCGCCGCGGCTG
CAGCCGCTGCTGCCGCTGCCCAAGCGGCGCAACAACAGCAATACGAGATG
GGTGCGACCGGCGGTGGTCGGCGAGTGGACTGGAAGCCACAGCAGGGCGT
TCTTGTCGCATCTTTGAGGGAGCACGGCGGGGCGGTGAATCGACTTGCGT
TGTCACAGGATCAGGCGTTTTTTGTCTCCGCTTCGTCGGACGGCACTTGC
AAGCGCGGGAGGGGGGGGAGGAGGCGGGGGGACTTCTGCCGGTTCGGGGG
GCGGTGGATTATCCGGATCGTCGAGTTCTGCCGCCGTCGCCGCCGCCGCC
GCCGCCGCGGCTGCAGCCGCTGCTGCCGCTGCCCAAGCGGCGCAACAACA
GCAATACGAGATGGGTGCGACCGGCGGTGGTCGGCGAGTGGACTGGAAGC
CACAGCAGGGCGTTCTTGTCGCATCTTTGAGGGAGCACGGCGGGGCGGTG
AATCGACTTGCGTTGTCACAGGATCAGGCGTTTTTTGTCTCCGCTTCGTC
GGACGGCACTTGCAAGGTATGGGAGCTGCGCGGGATGGACCACGCCGTCA
GTCCCCAGTCGCGTGCGACGTATTCGAGGCAGGGCGGGCGACTGGTGGAT
TTGTGCATGGTGGACAATTCTCACTCCGTCGCTTCGGCCTCTTCCGACGG
CACTGTTCACGTGGTATGGGAGCTGCGCGGGATGGACCACGCCGTCAGTC
CCCAGTCGCGTGCGACGTATTCGAGGCAGGGCGGGCGACTGGTGGATTTG
TGCATGGTGGACAATTCTCACTCCGTCGCTTCGGCCTCTTCCGACGGCAC
TGTTCACGTG
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