mRNA_H-paniculata_contig2102.5488.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig2102.5488.1 vs. uniprot
Match: L1JX35_GUITC (Sterol desaturase n=2 Tax=Guillardia theta TaxID=55529 RepID=L1JX35_GUITC) HSP 1 Score: 227 bits (579), Expect = 2.800e-67 Identity = 116/256 (45.31%), Postives = 155/256 (60.55%), Query Frame = 1
Query: 73 FVAGFLVVIIGHLLLCTVLQFGFYRWRSDQPEQWKVQPKKAQNLQGGVPEQWWVPLLGLLLGRKKPGRHPRHNLFATFNVFMASTFAGKVSDLIATGRSTVYWDGDAWQLWPIVVG-FALSMTWQCVCEYYWHRRELMHLSIFYARLHKYHHFYKSPEPFDDLMIHPLEAFGYFVLLYSPSFLFRMPVASFAAYMAVCGICGVLDHTGIALSIPGLYDTTDHDRHHSRFEVNYAFPFPVMDILHGTYDGKFLGTQH 837
F+AG +++G+ L LQ +Y R P++WK+QP++ LQ W P LG GR++ G+ H+ NV A AG V I G + + +D A P VVG F L++ WQ V EYYWHR LMHL FY HK HH YKSP+PFDD+ IHP+EA GY+ +LYSP F+F + V F YMA+ G+CG+LDH+GI G+Y+T DHD+HH F+ N+AFPF MDILHGT+ G +G +
Sbjct: 6 FLAGAAAIVVGYHGLSCALQAVYYLRRRCSPQEWKIQPQRFVRLQSPA---CWSPFLGRWFGRRE-GKEEYHDFVCAMNVITAGCSAGFVVRSIVRGSTRLLFDWKAAGRLPGVVGTFCLAVGWQSVLEYYWHR--LMHLPFFYKHFHKMHHSYKSPQPFDDMYIHPVEAVGYYCILYSPPFVFPLHVYGFVLYMAIMGVCGILDHSGIKWGFLGIYNTEDHDKHHEHFDCNFAFPFVWMDILHGTFAGDHMGIHY 255
BLAST of mRNA_H-paniculata_contig2102.5488.1 vs. uniprot
Match: A0A482SNF4_9ARCH (Fatty acid hydroxylase family protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SNF4_9ARCH) HSP 1 Score: 224 bits (571), Expect = 4.560e-66 Identity = 116/256 (45.31%), Postives = 153/256 (59.77%), Query Frame = 1
Query: 76 VAGFLVVIIGHLLLCTVLQFGFYRWRSDQPEQWKVQPKKAQNLQGGVPEQWWVPLLGLLLGRKKPGRHPRHNLFATFNVFMASTFAGKVSDL-IATGRSTVYWDGDAWQLWPIVVGFALSMTWQCVCEYYWHRRELMHLSIFYARLHKYHHFYKSPEPFDDLMIHPLEAFGYFVLLYSPSFLFRMPVASFAAYMAVCGICGVLDHTGIALSIPGLYDTTDHDRHHSRFEVNYAFPFPVMDILHGTYDGKFLGTQHS 840
VA V+ G++ + LQ+ FY R D WK+Q + L G KP R P H+L N+F+AS FA ++ + Y D D L I L+ T++ + EYYWHR LMHL FY HK HH YK+PEPFDD+ IHP+EAFGY+ +LY+P FLF M SF AYM + GI GV+DH+GI SIP +Y+T DHD HH++FEVNY+FPFP +DILHGT++G+FLG Q++
Sbjct: 8 VAASCVIFFGYIAHSSFLQYWFYVRRKDCVSDWKIQSNNTNTV---------GTLWGWSFFSSKPHRAPLHSLITCVNLFIASCFALMATECSVRRVNRMTYEDFDVNLLPTIFCQVLLACTYESLAEYYWHR--LMHLKFFYIAFHKMHHQYKAPEPFDDMYIHPVEAFGYYCILYAPPFLFTMHYVSFIAYMVIMGIFGVMDHSGIKFSIPAIYNTVDHDSHHAKFEVNYSFPFPYLDILHGTFEGEFLGRQYT 252
BLAST of mRNA_H-paniculata_contig2102.5488.1 vs. uniprot
Match: A0A7S1GXN0_HEMAN (Hypothetical protein (Fragment) n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1GXN0_HEMAN) HSP 1 Score: 223 bits (569), Expect = 3.270e-65 Identity = 121/280 (43.21%), Postives = 166/280 (59.29%), Query Frame = 1
Query: 25 MQRSIALLPFLSMPSPFVAGFLVVIIGHLLLCTVLQFGFYRWRSDQPEQWKVQPKKAQNLQGGVPEQWWVPLLGLL-----LGRKKPGRHPR------HNLFATFNVFMASTFAGKVSDLIATGRST-VYWDGDAWQLWPIVVGFALSMTWQCVCEYYWHRRELMHLSIFYARLHKYHHFYKSPEPFDDLMIHPLEAFGYFVLLYSPSFLFRMPVASFAAYMAVCGICGVLDHTGIALSIPGLYDTTDHDRHHSRFEVNYAFPFPVMDILHGTYDGKFLG 828
++ + L + + PF AGF ++ G+L + LQ+ FY + + + WKVQP++ Q G V W+PL+ + + P P H + ++ N+ MAS+ AG V+ L GR+ V+ DA + ++ + V EYYWHR LMH FY+RLHK HHFYKSPEPFDDL IHPLEA GY+ +LYSP F + F YMA+ G+CGVLDH+G+ + +PGLY DHD HHS+FEVNYAFP P+MDILHGT+ G +G
Sbjct: 15 VRNTTTLWGAMMISRPFAAGFSFILCGYLSMSYSLQYWFYARQQARIKDWKVQPER-QGGSGPVAYSIWIPLISPVPVNTDTHKSSPDSPPSKVRARDHWVLSSINLAMASSVAGTVAHLCCRGRTRMVFTLQDAGGVIGLLGWTGAAFALHNVAEYYWHR--LMHHRFFYSRLHKLHHFYKSPEPFDDLYIHPLEAAGYYAILYSPPFALPIHALGFGFYMAIMGLCGVLDHSGVRVRVPGLYAAEDHDLHHSKFEVNYAFPHPLMDILHGTFSGTCMG 291
BLAST of mRNA_H-paniculata_contig2102.5488.1 vs. uniprot
Match: A0A7S3D0N0_9EUKA (Hypothetical protein n=4 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3D0N0_9EUKA) HSP 1 Score: 205 bits (522), Expect = 7.760e-59 Identity = 102/247 (41.30%), Postives = 149/247 (60.32%), Query Frame = 1
Query: 94 VIIGHLLLCTVLQFGFYRWRSDQPEQWKVQPKKAQNLQGGVPEQWWVPLLGLLLGRKKPGRHPRHNLFATFNVFMASTFAGKVSDLIATGRSTVYWDG--DAWQLWPIVVGFALSMTWQCVCEYYWHRRELMHLSIFYARLHKYHHFYKSPEPFDDLMIHPLEAFGYFVLLYSPSFLFRMPVASFAAYMAVCGICGVLDHTGIALSIPGLYDTTDHDRHHSRFEVNYAFPFPVMDILHGTYDGKFLG 828
+ + +++ T+LQ+ +Y+ R + WK Q K+ + G +WW+P+ K R P + +FAT NV + A +L+ G S++ ++ + W++ +V F L + + EYYWHR LMHL FY HKYHH++KSPEPFDD+ IHPLEA GY++++YS FL M +FA YM V G+ GV+DH+GI P Y + DHD HH ++EVNY+FPF MDILHGT+ G + G
Sbjct: 16 IFVFYIIFNTLLQYYYYKGRVGDVKVWKTQAGKSSAV-GKAAARWWLPIFS-----NKEKRPPHYAIFATMNVLLQVACATTAIELVCRGYSSMRFEPVENEWKM--SIVSFFLGIVLHMMLEYYWHR--LMHLRWFYCTFHKYHHYFKSPEPFDDMYIHPLEALGYYIIMYSTPFLIPMHWTAFAGYMIVVGVAGVMDHSGIKFHFPLFYASEDHDLHHEKYEVNYSFPFMWMDILHGTFRGTYAG 252
BLAST of mRNA_H-paniculata_contig2102.5488.1 vs. uniprot
Match: C1FEX9_MICCC (C-4 sterol methyl oxidase n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1FEX9_MICCC) HSP 1 Score: 196 bits (497), Expect = 5.180e-55 Identity = 110/265 (41.51%), Postives = 152/265 (57.36%), Query Frame = 1
Query: 103 GHLLLCTVLQFGFYRWRSDQPEQWKVQPKKAQ---NLQGGVPEQ------------WWVPLLGLLLGR-KKPGRHPRHNLFATFNVFMASTFAGKVSDLIATG--------RSTVYWDGDAWQL---WPIVVGFALSMTWQCVCEYYWHRRELMHLSIFYARLHKYHHFYKSPEPFDDLMIHPLEAFGYFVLLYSPSFLF-RMPVASFAAYMAVCGICGVLDHTGIALSIP-GLYDTTDHDRHHSRFEVNYAFPFPVMDILHGTY 810
G++ L T +++ +Y R + +WK QP K + +G + W +P L L+ K GRHP H +AT N+ ++S FAG + G RST+ + A+ + + ++VG L++TWQ V EYYWHR MHL Y LHK+HH YKSP+P+DDL IHP E+FGY ++LYSP+F +PV +F YM + G CGVLDH G+ + P G YDT HD HH F+ N+AFPFP MD LHGT+
Sbjct: 15 GYVALSTWVEWRWYHRRRGKEREWKTQPGKMHGKIHRRGAARDDDDDGRGRRGYYAWGLPALDLVRASPSKDGRHPSHACYATCNLVVSSLFAGATCEAYLAGDGKLFGLFRSTLV-NASAYSVASAYSVLVGAVLAVTWQSVLEYYWHRA--MHLPRVYRLLHKFHHHYKSPQPWDDLFIHPAESFGYCLILYSPAFCVPSLPVQAFLLYMTIMGACGVLDHCGVKMRWPFGAYDTQFHDVHHRSFDANFAFPFPTMDRLHGTH 276
BLAST of mRNA_H-paniculata_contig2102.5488.1 vs. uniprot
Match: A0A1Y5I6G7_OSTTA (Fatty acid hydroxylase domain-containing protein n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A1Y5I6G7_OSTTA) HSP 1 Score: 191 bits (486), Expect = 4.700e-53 Identity = 105/237 (44.30%), Postives = 143/237 (60.34%), Query Frame = 1
Query: 157 DQPEQWKVQPKKAQN--LQGGVPEQWWVPLLGLLLGRKKPGR-----------HPRHNLFATFNVFMASTFAGKVSDLIATGRSTVYW--DGDAW---QLWPIVVGFALSMTWQCVCEYYWHRRELMHLSIFYARLHKYHHFYKSPEPFDDLMIHPLEAFGYFVLLYSPSFLFRMPVASFAAYMAVCGICGVLDHTGIALSIP-GLYDTTDHDRHHSRFEVNYAFPFPVMDILHGTY 810
++ +WK+QP +A ++ + W PL ++ GR G HPRH L+A+ N+ M++ FA V + +A G + +Y + DA ++ I+ GFA++ WQ V EYYWHR MH FY R HK HHFY SP + DL IHP+EAFGY+ +LY+P F F + ASF YMAV G+CGV+DH+G+ +S G YDTT HD HH F VNYAFPF ++D L GTY
Sbjct: 60 EEVREWKIQPGRAATGTVRTTKSDPWGFPLYQMITGRHPKGGKHDGGKGARVIHPRHRLYASVNLLMSACFAFAVGESVARGWTRMYGGLNVDATFIGSIYDILRGFAVATVWQSVLEYYWHRA--MHARWFYERAHKIHHFYVSPCCWCDLCIHPMEAFGYYCILYAPGFFFPLHRASFILYMAVMGVCGVMDHSGVDVSFADGAYDTTFHDAHHRLFFVNYAFPFDIIDRLCGTY 294
BLAST of mRNA_H-paniculata_contig2102.5488.1 vs. uniprot
Match: C1MKM3_MICPC (Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1MKM3_MICPC) HSP 1 Score: 188 bits (478), Expect = 1.560e-51 Identity = 112/312 (35.90%), Postives = 158/312 (50.64%), Query Frame = 1
Query: 58 SMPSPFV-----AGFLVVIIGHLLLCTVLQFGFYRWRSDQPEQWKVQPKKAQ----------NLQGGVPEQ--WWVPLLGLLLGRKKP------GRHPRHNLFATFNVFMASTFAGKVSDLIATGRSTVYWDGDAWQLWPI--VVGFALSMTWQCVCEYYWHRRELMHLSIFYARLHKYHHFYKSPEPFDDLMIHPLEAFGYFVLLYSPSFLF-RMPVASFAAYMAVCGICGVLDHTGIALSIP-----------------------------------GLYDTTDHDRHHSRFEVNYAFPFPVMDILHGTY 810
S P P+V A F ++G++ L ++++F +Y R WK QP+ + + +G ++ W +PLL L GRHP+H FA+ N+ +++ FAG ++ A G S++ +W P+ +V + WQ V EYYWHR MH Y RLHKYHH YKSP PFDDL IHPLEA GY +LYS +F+ +P+ASF AYMA+ G+CG++DH G+ + +Y + HD HH RF+VNYAFPF MD LHGT+
Sbjct: 29 SFPVPWVRASSVAVFAAQLLGYVALSSIVEFAYYHRRRGDETSWKCQPRAIRPGDXXXXXXXHRRGSSRKKYAWGLPLLDLFASSXXXXXXXXRGRHPKHATFASLNLLVSALFAGATAEATARGHSSL----TSWTAPPLTSLVALVKIILWQSVLEYYWHRA--MHAPRLYKRLHKYHHHYKSPRPFDDLFIHPLEAAGYCAILYSSAFVCGEVPIASFLAYMAIMGVCGIIDHCGVRFRVGFXXXXXXXXXXXXXXXXKKSISKTITETTGADIGVEVYASRFHDLHHERFDVNYAFPFAFMDALHGTF 334
BLAST of mRNA_H-paniculata_contig2102.5488.1 vs. uniprot
Match: A0A830HM61_9CHLO (Fatty acid hydroxylase domain-containing protein n=1 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A830HM61_9CHLO) HSP 1 Score: 185 bits (470), Expect = 3.400e-51 Identity = 115/260 (44.23%), Postives = 148/260 (56.92%), Query Frame = 1
Query: 70 PFVAGFLVVIIGHLLLCTVLQFGFYRWRSDQPEQWKVQPKKAQNLQGGVPEQWWVPLLGLLLG---------RKKPGRHPRHNLFATFNVFMASTFAGKVSDLIATG----RSTVYWDGDAWQLWPIVVGFALSMTWQCVCEYYWHRRELMHLSIFYARLHKYHHFYKSPEPFDDLMIHPLEAFGYFVLLYSPSFLF---RMPVASFAAYMAVCGICGVLDHTGIA-LSIPG-LYDTTDHDRHHSRFEVNYAFPFPVMDI 795
P V F + + G++L+ + LQ YR+ +V K++ WW PLL LL R +HPRHNL+AT N F +S FAG ++ R T D + FA ++ WQ V EYYWHR LMH Y HK HH Y+ P PFDDL IHP+EA GY+++LYSP+FL ++P+ASF YMAV G+CGV DH+G+A L IPG +Y+TTDH HHS F VNYAFPFP+MDI
Sbjct: 26 PGVLFFFLQLSGYVLISSWLQ---YRYYFQDLSGVRVHHKRSF-------VSWW-PLLSLLFPSRDLPHISLRPHGSKHPRHNLYATINSFTSSAFAGTIAYAFHANLTWCRITTTARDDYTDYFK---AFATAVAWQSVIEYYWHR--LMHWGWIYKAFHKLHHTYQHPVPFDDLFIHPVEAMGYYLILYSPAFLPILPKIPLASFVTYMAVMGLCGVFDHSGVASLRIPGGIYETTDHANHHSPFVVNYAFPFPLMDI 269
BLAST of mRNA_H-paniculata_contig2102.5488.1 vs. uniprot
Match: W7TYR2_9STRA (C-4 sterol methyl oxidase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TYR2_9STRA) HSP 1 Score: 185 bits (470), Expect = 8.260e-51 Identity = 114/298 (38.26%), Postives = 157/298 (52.68%), Query Frame = 1
Query: 67 SPF-VAGFLVVIIGHLLLCTVLQFGFYRWRSDQPEQWKVQPKKAQNL-------------QGGVPEQWWVPLLGLLLG--------------------RKKPGRHPRHNLFATFNVFMASTFA-----GKVSDL---IATG-------RSTVYWD-GDAWQLWPIVVGFALSMTWQCVCEYYWHRRELMHLSIFYARLHKYHHFYKSPEPFDDLMIHPLEAFGYFVLLYSPSFLFRMPVASFAAYMAVCGICGVLDHTGIALSIPGLYDTTDHDRHHSRFEVNYAFPFPVMDILHGTY 810
SP+ VA FL++ G+L L L FY+ R + E WK+Q +++ +G + + L + R GR P+H LFAT N+ +AS FA G V + + TG R ++W G++W +VV S+ WQ EYYWHR LMH Y R HK+HHFYK+P PFDD+ I PLEA GY+ +LYSP+ + M V SFA Y+ + G+CG+LDH+GI + +P +YDT HD HHS N+ FPFP +D+LHGTY
Sbjct: 8 SPYAVAAFLIIFWGYLTLNAALYIVFYQCRCSETESWKIQTHNTRHINKRETGTIYGASSEGRKRQVTSISKLTSTVNNNTLISYALANLADVPWPWRRGVKGRAPQHALFATCNLMIASLFALLTAEGTVRGIGSQLKTGHPHVLGTREVIWWLLGESW----LVVA---SLGWQSAWEYYWHR--LMHYGPVYRRFHKHHHFYKAPAPFDDMYIAPLEALGYYFILYSPALVLPMHVLSFAVYLTLLGLCGILDHSGIDVRLPRVYDTRFHDIHHSYTNANFGFPFPFLDVLHGTY 296
BLAST of mRNA_H-paniculata_contig2102.5488.1 vs. uniprot
Match: A0A061RXV7_9CHLO (C-4 sterol methyl oxidase n=2 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061RXV7_9CHLO) HSP 1 Score: 182 bits (461), Expect = 6.970e-50 Identity = 101/247 (40.89%), Postives = 137/247 (55.47%), Query Frame = 1
Query: 103 GHLLLCTVLQFGFYRWRSDQPEQWKVQP---------KKAQNLQGGVPEQWWVPLLGLLLGRKKPGRHPRHNLFATFNVFMASTFAGKVSDLIATGRSTVYWDGDAWQLWPIVVGFALSMTWQCVCEYYWHRRELMHLSIFYARLHKYHHFYKSPEPFDDLMIHPLEAFGYFVLLY--SPSFLFRMPVASFAAYMAVCGICGVLDHTGIALSIPGLYDTTDHDRHHSRFEVNYAFPFPVMDILHGTY 810
G++L+ T LQ + R +++VQ + A+ G + WW+P + L + RHP H L+ T N+ AS+F V++ G + + ++ + F + Q V YYWHR LMH Y LHK HHFYK+P PFDDL IHP+EAFGY+ LLY L RMP+ +A Y+ + G+ GVLDH+GI LS+P Y +DHD HH F VNYAFPF +MDI HGTY
Sbjct: 17 GYVLVSTFLQSLYLR-------RYRVQAXGNMDSRTDEAAKGHSGALGTYWWLPAVNLFGXKPDYSRHPLHGLYCTINLLTASSFLAFVTEAHIRGWNNIKLPEPDTLIYLEWLPFLRATLAQSVLVYYWHR--LMHWRPCYKALHKLHHFYKAPRPFDDLFIHPVEAFGYYTLLYLFPAHCLGRMPLGDYALYLTIHGVFGVLDHSGIYLSVPPFYHVSDHDAHHRHFNVNYAFPFVLMDIFHGTY 254 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2102.5488.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2102.5488.1 >prot_H-paniculata_contig2102.5488.1 ID=prot_H-paniculata_contig2102.5488.1|Name=mRNA_H-paniculata_contig2102.5488.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=280bp MQRSIALLPFLSMPSPFVAGFLVVIIGHLLLCTVLQFGFYRWRSDQPEQWback to top mRNA from alignment at H-paniculata_contig2102:14800..21544+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2102.5488.1 ID=mRNA_H-paniculata_contig2102.5488.1|Name=mRNA_H-paniculata_contig2102.5488.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6745bp|location=Sequence derived from alignment at H-paniculata_contig2102:14800..21544+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2102:14800..21544+ >mRNA_H-paniculata_contig2102.5488.1 ID=mRNA_H-paniculata_contig2102.5488.1|Name=mRNA_H-paniculata_contig2102.5488.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1680bp|location=Sequence derived from alignment at H-paniculata_contig2102:14800..21544+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |