prot_H-paniculata_contig20970.5465.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig20970.5465.1
Unique Nameprot_H-paniculata_contig20970.5465.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length80
Homology
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BLAST of mRNA_H-paniculata_contig20970.5465.1 vs. uniprot
Match: D7G084_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G084_ECTSI)

HSP 1 Score: 57.4 bits (137), Expect = 9.300e-8
Identity = 24/46 (52.17%), Postives = 34/46 (73.91%), Query Frame = 0 
Query:    7 QYNGCSSPSKYGPQNEPATLCNDHKKAGMYTIRNGELLRATRNGRA 52
            ++ GC+   +YG +N P TLC  HK+AG+YT+R+G LL ATR+G A
Sbjct:  185 KHTGCTRTPRYGRKNGPLTLCQSHKRAGLYTVRDGVLLVATRDGSA 230
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BLAST of mRNA_H-paniculata_contig20970.5465.1 vs. uniprot
Match: A0A6H5KL62_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL62_9PHAE)

HSP 1 Score: 52.0 bits (123), Expect = 5.840e-6
Identity = 22/44 (50.00%), Postives = 31/44 (70.45%), Query Frame = 0 
Query:    7 QYNGCSSPSKYGPQNEPATLCNDHKKAGMYTIRNGELLRATRNG 50
            ++ GC    +YG +N P  LC  HK+AG+YT+R+G LL ATR+G
Sbjct:  178 KHAGCFRALRYGRKNGPLMLCQSHKRAGLYTVRDGVLLVATRDG 221
[Close]
BLAST of mRNA_H-paniculata_contig20970.5465.1 vs. uniprot
Match: D8LH38_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH38_ECTSI)

HSP 1 Score: 48.9 bits (115), Expect = 9.030e-5
Identity = 22/46 (47.83%), Postives = 28/46 (60.87%), Query Frame = 0 
Query:    7 QYNGCSSPSKYGPQNEPATLCNDHKKAGMYTIRNGELLRATRNGRA 52
            Q+  C    +YG  + P T C  HK+AGMYT R+G L  ATR+G A
Sbjct:   83 QHGECDGTPRYGGHDGPLTFCRAHKRAGMYTTRDGVLYVATRDGSA 128
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig20970.5465.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G084_ECTSI9.300e-852.17Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
A0A6H5KL62_9PHAE5.840e-650.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LH38_ECTSI9.030e-547.83EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig20970contigH-paniculata_contig20970:292..3199 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig20970.5465.1mRNA_H-paniculata_contig20970.5465.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig20970 292..3199 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig20970.5465.1 ID=prot_H-paniculata_contig20970.5465.1|Name=mRNA_H-paniculata_contig20970.5465.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=80bp
MCLYARQYNGCSSPSKYGPQNEPATLCNDHKKAGMYTIRNGELLRATRNG
RANIWKRCQVSGCTAKPSYGSMRGECCYM*
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