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Homology
BLAST of mRNA_H-paniculata_contig2092.5451.1 vs. uniprot
Match: D8LHH3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHH3_ECTSI) HSP 1 Score: 110 bits (275), Expect = 8.250e-22 Identity = 56/91 (61.54%), Postives = 68/91 (74.73%), Query Frame = 1
Query: 1 QIIGHRQAGFLAFDGDHARFENRGKDPLDFMLIEAEPTYENAATRGSFVMNTEQELDQAEADKYRGYFGRPWDFRLSDDEWRKSLQGAAGK 273
Q++ A L DGD+ARFENRGK+ LDFMLIEAEPT E+ ATRGS VMNTE+E D+A D G+FG PWD RL+DDEWR+ L+ A G+
Sbjct: 375 QLVSTATAVSLEDDGDYARFENRGKEDLDFMLIEAEPTRESIATRGSMVMNTEKECDKAYRDFSEGFFGVPWDNRLNDDEWRE-LEQAPGR 464
BLAST of mRNA_H-paniculata_contig2092.5451.1 vs. uniprot
Match: A0A835YT14_9STRA (RmlC-like cupin domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT14_9STRA) HSP 1 Score: 78.6 bits (192), Expect = 5.050e-12 Identity = 37/72 (51.39%), Postives = 45/72 (62.50%), Query Frame = 1
Query: 28 FLAFDGDHARFENRGKDPLDFMLIEAEPTYENAATRGSFVMNTEQELDQAEADKYRGYFGRPWDFRLSDDEW 243
+L GD N G LDF+L+E EP E A GSFVMNT QE+ QA D RG+FG PWD +LSD++W
Sbjct: 230 WLGGSGDAVLLANEGNSELDFLLLEGEPLGEPRAAGGSFVMNTPQEIGQAYEDYNRGFFGAPWDHKLSDEDW 301
BLAST of mRNA_H-paniculata_contig2092.5451.1 vs. uniprot
Match: A0A8J5XSZ4_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XSZ4_DIALT) HSP 1 Score: 59.7 bits (143), Expect = 1.020e-5 Identity = 30/68 (44.12%), Postives = 41/68 (60.29%), Query Frame = 1
Query: 67 RGKDPLDFMLIEAEPTYENAATRGSFVMNTEQELDQAEADKYRGYFGRPWDFRLSDDEWRKSLQGAAG 270
RGK P + +++ EP E A G++VMNT+ ELDQA+ D G G PW+ +DDEWR + A G
Sbjct: 277 RGK-PAEALVLAGEPLREPVAGGGTWVMNTQAELDQADRDYAAGVMGVPWEHTATDDEWRAHVARARG 343
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 77.8 |
| Seed ortholog evalue | 2.4e-12 |
| Seed eggNOG ortholog | 2880.D8LHH3 |
| KEGG ko | ko:K06911 |
| Hectar predicted targeting category | other localisation |
| EggNOG free text desc. | quercetin 2,3-dioxygenase activity |
| EggNOG OGs | 2QQ5A@2759,COG1741@1 |
| Ec32 ortholog description | Pirin |
| Ec32 ortholog | Ec-11_004080.1 |
| COG Functional cat. | S |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000 |
| Exons | 3 |
| Model size | 2379 |
| Cds size | 228 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2092.5451.1 >prot_H-paniculata_contig2092.5451.1 ID=prot_H-paniculata_contig2092.5451.1|Name=mRNA_H-paniculata_contig2092.5451.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=76bp
MLIEAEPTYENAATRGSFVMNTEQELDQAEADKYRGYFGRPWDFRLSDDE WRKSLQGAAGKRTSYTADDGSGRFR* back to topmRNA from alignment at H-paniculata_contig2092:15754..22302- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig2092.5451.1 ID=mRNA_H-paniculata_contig2092.5451.1|Name=mRNA_H-paniculata_contig2092.5451.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6549bp|location=Sequence derived from alignment at H-paniculata_contig2092:15754..22302- (Halopteris paniculata Hal_grac_a_UBK monoicous) CAGATCATTGGTCACAGGCAAGCGGGTTTCTTGGCCTTCGATGGGGACCA
CGCGAGATTCGAGAACCGAGGCAAAGATCCGCTGGACTTTATGCTGATTG
AGGCGGAACCCACGTACGAGAATGCTGCTACGCGGGTGAGTCATTATCCA
GTTGGAAGTGAATGTACTCACTCCCGTCGCCCAGGGTAATGAAACTAAGG
ATGGGTATACGTATGACCCAAGTGTAGGATATTGTAAAGATATTGCCCGG
TTCATTTTCCTCTCATGCATGTTATAAATATGGCTTGGTCATTATCCAGA
CCTCACCGAACAAATGTGGTAATATAGCATATGTTGATCCACCCTGATCC
TCCTACAGGTGAATTTTGGAGGAGTTATAACGGATTCTATCTTCCAAAAT
GACCTGAAATCGGTTGTTGTATAACATGAGGTTTTATTTTTTTCCCGATT
CGCCTGTTGTAGGCGCTCACCTTTGGGTGGAATTTTTTCGAACTGGGTGC
TTCCTCGAGAATCAAGTTTTTGCACTCTATCTGCGGAGCACGTCTATCCA
ATGACAGAGTGCACTCAGGATAATAAGTCATGGTTATATGCAGGATGTTT
CTACGGGTTTTCTCAAACCATTCATTGATGCCTCGTCGCCATCTAATTAT
GATTTATTCATGATATTATATGTTAATGCAAGACTCCGTTTAGTAATCCT
TGACACGATTATATCCATAAAGTCACAAACACTAAAGCCTTTCGCGTGCG
GCGGGCTAAGTATTTTGTGACTTGAATCACCCCACGCCGCAGGCGAGACT
TGGTATCTCGAGTATACGATCGATGCATCTCGACGAAAAATCTTCAAGAC
GCACCGTTTGGTTGCAGCACGTCTATCCCATATCGGATGTCGGTCTGCGA
GATCTTTCCCAAAGACGCAGCTTTAAGTCTCACAAGACAGCACCGCTGTT
TCGCAGATGGTGTTATCCAACGTGTCATCCCTTCCTAGCCTCGAGTGTTT
CAAGTACATGCCATTGAATAAGGCAAAAACAAAAGCACACAGGCTATTTA
TTTCGCTGAAGACGTGGTTTTCGTGCGAAGATGGGGCTTGGGTTCTTGTG
CAAAGTTTGTTGGATTTTTTCATGTGCCATACATGCGGGGCAATAAAAGA
AACCGCTACGGTACGATAGTCTTTTCAAACAGCTTTTCCCCCCTGATTAG
CGGAGTTACAGACTTAGCCCTCTCTTACAGGTGTTGGACAGTGCTGATGC
TGCACGGCGTGTGTATGGCAAAAAAACACCAGCAAAAGGCCCTAATGCTG
TATGACCACAGTTGATGTTGAAAGGGCTGGGGGGCGGGTCTATTCTCCGT
CTGTCCATGTACGTATGTGTGGATGCCTTAACCCTCAAGGGGTTTACAAC
TCGGAGATTTTGTTTTTCGGGTCATGTTTTTTTTTATGCTATACGGAAGC
CGTTTTTAGAAAGTAGATATCTGTATGTGACCTAATGGAAGCCGACGATA
GTGGTTGCAACATCATTGGATGCCATAGGGCAACTGGGGTGTGTTTACGG
TTGCTGCCGTTAGCTGTTACACTGAACCGGGTAGCTGCAACTTGTTATTT
AATCCGGCGCAACCGTCAGTGTGCGGCGCGCCTCTCGTCCAAGAGCGTGC
GTGTGGTGACCACCTCCGAAACAATGCGATAGTCTTCGTTACTGGAAACA
GCCTAAGATAAAGAGTATTACCCCGAATATCGCGCGTACTTGTGAAGGAA
AAAGTCTTCGTGAAGGAAAAATGCAACCCGCCCAATGGAGGCCTATACCC
GTAGACACGGATGTGCATACCCTCACATCATAGGCCGAAAAAACGGGAAG
ACAAGGCGAAGCTGGAACTGCAAGAGGATCTAATTTCACATGACAACCAA
CAAGAAATACGCCTTGTTACACAGGTTGCCGCAATCTGCACGTCGACGGC
ACATGAAGTAAAGTACACGCCACACATGAGTAGCTCCCGCCATCACGACA
AAAACAAACGCGAGTCATTTCAGTGTAGCGACACAAGTACATGGTGCGCA
CAACACGCCAAGAACCGAAAATTACAGCAGGAAACCTCACAGTCGCGAAG
ACGCTACCGCTTATCCAAGTTTGGAAGTCCTCAAGAATCCCAGTTTCCCA
TAAGAAGTGGTAATTGAATATGTTTACATGAGATATTTGTCTAAAGTGAA
AAAGTAGTAAAAAAGAAAATCAAATTTCCAATTTTGAAGAATCCAAGTCC
CGTAAGAAGTGGTCTCTTGTGCGTTGTTTTTCATAAGGGATTTGTCCTGT
TGAGGTACTTGATGATACGTATTTTGTTCATATAGCCCTAACAAAGGGTC
AAACGTTGTGACCGAAAAAGGCCAACATGGTGGGTATGATGTTTGGTGAA
TAATCGTACGTGGCAAAAGACGAAAGAACGTTGGTTTTGATTATATACAT
ATATTGTTTTCTTGCGTGATATTGACGGTCGCAAACAGGGCAGTTTCGTG
ATGAACACAGAACAGGAGCTTGACCAAGCAGAGGCGGATAAGTACCGCGG
GTACTTCGGGCGGCCGTGGGACTTTCGCCTGTCAGACGATGAGTGGAGAA
AGGTGTGCTTTTTGAGGTGTCACATCATGTCGTCTAGTGTGACGTGATGT
TGTGGTGATATTATGTGATGTAACTTGGTTTGATACGATGTGTGATTTGA
CGCGATGATGTGACGTGGTTTTGATCCGATCTGATCCGGTCTGGTCGTGG
TTGACTTGATCCGGTCTGATGTGATGTGCCGTGATGTGATGTGGCTGAAT
GCGATACGGTTATTTGAGGTTCTTCCATTCTTTCTTTTGGCGCAGGAAAC
GCGCCGCTGGCAAAATTGTATCCCTTTTCTGCCCGTGATGTATGGAGTCT
GAATACTCTATGCCACCTCATCTGGTATGTCGGACCACATACATGTAAAT
AGATGAATACATACTCCCTCTGTCTGGGCGTATTGCGGTGGCCACCTTAG
GAACCACCTTTGAAGAGGTCATAATCGCCCAACTTCACCTACTCCCTCTG
TCTCATATGTCTGTCGGGTTTGGTGACATGAGGCATAACTTTCTACCTCC
TTGGGTTATACACCTCAAACTATATATCATTCGAAAGCCCTTGATTTCCG
CTATCTCTTGGATATTTTCAAAACACAATTCCGATTTGTTAACATTCCGA
AAGTCCAAGGTGAAAAAAAACGTTACTATTTTTTTCGGTGTATTATTTTT
TCAGTTGCAGCCCCCCCACACCACACACAGCACCATGGCAAGCCCTCCCA
GCCCACCGCTGAGCTCTGCCAGTCCAACCGTGAACCTTAGGGAGGCGGCG
TCTAGTCCTCCAAGTCCATCATTATACCCTGGAAGCCCATCCCGTCGTAT
CAAACACGGAGAGCTCTCTCCAGGATCTCGTTACGGATCGGCATCACGGT
GTGCAAAGGCGTTGCCACCCGGGCAGACCAAGATGCCCCATGGCACATAC
AAAGCGCGCGCGGATAAGTACGAGGACCGGCAGGGCTCAGCGGTGGGCTG
GGAGGGCTTGCCATGGTGCTGTGTGTTGTGTAGGGGGGCTGCAACTGAAA
AAAAAATGCACCGAAAAAAATAGTCCCGGGTTTTTTACAAACCTCTGACA
AAAAAACGGGGTCGTGTTTTTTTCACCTTGGACTTTCGGAATGTTAACAC
ATCGGAATTGTATTTTGAAAACATCCAGGAGATAGCGGGAATCAAGGGCT
TTTGAATGATATATAGTTTGTGGTGTATAACCCACGGGGTAGAAAGGTAT
GCCTCATGGCGCCAAACCGGACAGACATATGAGACAGAGGGAGTAGGTGA
TGTTGGGTGATTATTACCTCTTCAAAGGTGGTTCCTAAGGTGCCCACCGC
AATACGCCCCCCTTTCTTCGAGTCTTCCTTTGGAAGACTTCAGTTTAATG
GTAACTGGAACTTGGCCGGCACGCGGCGAGGTGATACAATATCTTGACAT
AAGTTCTGATCTTGTTGCTTTGACTTCGGTGTTGGGTGCTTAACTTTTGT
TTTTTGATGTGTTGGTTCTGGCGTTTGAAACCATAATCTTGTCCACGCAA
AACAGAGAAATTATTCATTGTTGCCAATGTCAAAATGAGGGTAGCTGTCG
GTGAGTAATCATTGCTCGTTTTAAAGTGTTTCTAAGGCGACCACGATACA
TGCACAAGTGTATCGCAAAGGAGCACATACTTGTCTTTCCGGCTAACGCT
GTCTCGCCACATGCTTTTGCAAATGTTTTTCTGCTCCTTTCTCTCTCGCC
CTCCCTCGACCCTGTGATCACAGCTCGCATTCCATGCAATGTTCCGTGCC
TTCCTTCACCCCCCCCCCTCCTCCTCTATCCCCGGCAAAACGTCTCGCTT
CGTGTTCGCTAACCACCAGTCTTTGCAGGGTGCAGCGGGGAAACGGACCA
GCTACACGGCTGACGACGGCAGCGGGAGATTTCGATAATAGCGTGATAAA
CGCACGTGTATAATTTACAGTAGAGATAATCATTTGCCATGGAGAATGCG
GAATAACGTAGAAGGTCATCCTGGATGTCATCAAACAGAGAAAATCAGTG
TCGACGAAATTGATGGTGATCGATGATGATCATCAAGGCATCTCTCACAT
TCCCAAGTGGGGGGGAGGGGTCGATTCTGTCCACACGCCGACACCAAATG
CAAGGCAACGGTCAAAGCTGCAATGGGGAATAACGTACTTCGTGCCGTAT
GCGGGCAAAATTGGAAGACGTCCTGATGGATGTCAGTCCGTCTACGGCAT
GTATTTTCCTTGAATAATGCTTACACGCGTGCCGATATGCATGCGACGGC
AGGGAGCGGGAGGCGCGTGGGGGTGTTGTCAATTATCTTGGTTCAAGTTG
TTAATTGTCTTGCCTGTTCTCCTGCTTTGGGGGGGGGTGCAAGAGGATGT
GTTGGTAGTTGCTTTGACGTGTAAGTTCGACCAGTTATAACCCCGTGTCG
TTGGAAATTCCTGTGTACGGACGGTATGTGATTTGCCTGTTGATGCAAGT
GCACCGGTACGTTGCGGAAAACGCCCGTCTCCTTGCGGCCGAGTGATGCG
TTGCGGTCGCGTATCTGGCTGTCGCTGTTGTCGAAATCTAGATGGATGCA
AGACACTGCGGCACGTTGCGACGTTGTCGTTTCGTTTATACAGTGAGATT
TCGTTGTTTCGCTGTTGTGGATTGACTGCAACATTGCCGTGCTGTTGTGA
GCTGTTTGTTTGCGATGCTCTCTCTTCTGTCCCCCCTCTGCATTTTCCGC
TTTAGGCTGAAAATGTTGTACGTGGCTTCACAGGAGTAAATGAACAGTGG
CCGGTGGTGATGGTTGTGGTGATGAAGAGCAGACTATCTCTCTAGTTGCA
TGTGGTCGATTCTGTGTAGCTGTGTGTCGCTCCGCACTCTTTGGGCACAC
CAGGGAGGGTTGCTTCATGGTGGAATGGTTCTTTTTATAGAAAAGACACC
TCCGTGTACGCTGTGCAGCTTGTTGAATCTTCGACAAAGACAAGGCGATC
GGGAGGATCGTAGCACAAAAGCACGCCTCCCGTCCATGGTCCAGCATATC
TTTTTTTGAATATATATTTAGTGCGCTTTTTGCATTTTCGAGTGAGTCTA
GCGTAGCGTGTACATTCGTCGCTTGTTGTGCGTAGACGTTTTGTGCTGTG
TAGTGCTGCTCTAGGCATTTTTCTTTTTTCTTGGCTAGCTTGCTAACCGC
CCCCCCCATGCTCTCCTTTTCTAGCTTGTATTAAGTCTGGATGCCGGGGC
AGGCTCTGCAATACATCATATATTGTTGTCTACTTGTGCGCAGCAGAAAA
AAAAAAAAAAAAGGTGCCCGGAGTGGTTCCTTGGGTCGTTTTTTTTCATT
TGGACATCCGATTGGTCTGGAAAGCTTGGTCGTTGGTGCCGTCATCTGGG
TTAATGATGTCATCACGTCTTGGAGGTAATTGTTGACATTTCGGTGGAGG
TGCACTGTGCACTGAGATGGATCGAGGTGTTCTGCACGCTTTTGGTAAGG
TCCTGCGTATATATATATATATATATATGTAAACACAGACCTATCAAAGG
AAATTAGGGCGCGACGGGGACCTTAATGGGCGTCACAGAATAACATACCA
ATTTTGACTGTATGTTTGGTGACGCGGTAGGCCTGAATCGATATCCTTGG
CGTGCGCACTACCTCGAGAGAGCAGATTATTCAAGTACTTCGCTTTCGAG
AGGCGTGCTTGATCTCTCTCAAAACTTCCACAACTCTCAGCCTGCGATCT
CCGATCGATGAGCTACGGAATGAAGTCTATCGGATTTGAGTCGTTCAATA
ATGCACAGAACAGCAGCTACAAAATGCGTCTCGCCGGCTGAGGATGCGGT
GGGGGAGGTTCCATCTGTTATAGAGAACCTGGTACGTTGTTGTGGGAGAT
TACTGAGCTGGCGCTTTATGGGGCAGAAGAGCGAACCACTCGTGCACCTG
CCCTGCACATGCCAGTAGATATGTGTTCAGGCCTGTTGTTGTGATGTCC back to topCoding sequence (CDS) from alignment at H-paniculata_contig2092:15754..22302- >mRNA_H-paniculata_contig2092.5451.1 ID=mRNA_H-paniculata_contig2092.5451.1|Name=mRNA_H-paniculata_contig2092.5451.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=456bp|location=Sequence derived from alignment at H-paniculata_contig2092:15754..22302- (Halopteris paniculata Hal_grac_a_UBK monoicous) ATGCTGATTGAGGCGGAACCCACGTACGAGAATGCTGCTACGCGGATGCT GATTGAGGCGGAACCCACGTACGAGAATGCTGCTACGCGGGGCAGTTTCG TGATGAACACAGAACAGGAGCTTGACCAAGCAGAGGCGGATAAGTACCGC GGGTACTTCGGGCGGCCGTGGGACTTTCGCCTGTCAGACGATGAGTGGAG AAAGGGCAGTTTCGTGATGAACACAGAACAGGAGCTTGACCAAGCAGAGG CGGATAAGTACCGCGGGTACTTCGGGCGGCCGTGGGACTTTCGCCTGTCA GACGATGAGTGGAGAAAGTCTTTGCAGGGTGCAGCGGGGAAACGGACCAG CTACACGGCTGACGACGGCAGCGGGAGATTTCGATAATCTTTGCAGGGTG CAGCGGGGAAACGGACCAGCTACACGGCTGACGACGGCAGCGGGAGATTT CGATAA back to top
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