mRNA_H-paniculata_contig209.5443.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig209.5443.1 vs. uniprot
Match: D8LF41_ECTSI (Signal recognition particle subunit SRP68 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LF41_ECTSI) HSP 1 Score: 875 bits (2262), Expect = 5.820e-313 Identity = 480/670 (71.64%), Postives = 537/670 (80.15%), Query Frame = 1
Query: 178 KLSLKVHEVAKDCQNQNGMRHGDYHQYRQYCTRRLKRVRSSRDVRFMFGKGKTFIQKELTPDLVTTSRHLEIPLMMSERAWSYAMQRKAETVGAPFRVRRQVVTRLAKAAKWASDLEALCLETADERTCLEATAYAAWMSGNLLLEREAWREALERFSTANKICQELGKVGRVEDQDLFTRRVEDIEPILRYCRYNLDSSSGTAHAAAAAEEHLIEMSRKGAAGAGGDLLAAKLESVVAEARKKQASALDSVQWRGEKVAVRFEALRVALVKADELARALGPTSSARSRSAGEGGESGGEGEG-EDPKPGQYLKVFGAYDDALSTISTEASRLQGKGGGMKMGAHRAELESLRAYAQHHKLRLMLQRNERLVQGLQERRIAGGDAGVGGGGGNGAERDPVGEAADIVHVYDALLQSVRSMVANLGGGDDAGDDVTEEEDELIESARADEARFRAFRCFFVIEAFSAGQKWAEASALFSHTRELCQEAVDMLDDDDPRAESLAQLDDMVQGAWHRTAAHALLVKNNQEASLSKGMGGVSNSGRVGGG-DSGSHETTGVVVAVRERSLQERLKMFDSSAGHGXXXXXXXXXXXXKKQEQFERFAIADFPPSLQLVPCKPRLLDLAYDDLEFPDLDERAGIEKVEEIVDAQTPSGAVNGGGVLGWVGWALGRT 2181
KLSLKVHE+AKD QN+NG+RHGDYHQYRQYCTRRLKRVRS VRFMFGKGK F+QKELTP+ VT++ HLEIPLMM+ERAW++AMQRK ET AP+RVRR VVTRLAKAAKW+ DLEALCLETADERTCLEATAY AWMSGNLLLE+EAWREAL+RFSTA++ICQELGKVG +EDQDLF+RRVE+IEPILRYCRYNLD++ A E L+EMSR+ ++ AGGDLLAAKLESVVAEARKKQASALDSV+WRG+KVAVR E LRVALVKADELAR L E+GG G EDPKPGQYLKVFGAYDDAL TIS E SRLQGKGGG KM AHR+ELE LRAYAQHHKLRLMLQRNERLVQ LQE+R AGG G ERDPVGE ADIVHVYDALLQSVRSMV NLGGGDD DD+ E EDE+IESARADEARFRAFRCFFVIEAFSA QKWAEASALF HTR LCQEA +MLDDDDPRAESL +LD+MVQGAWHRTAAHALL+K+ QEA+LS G+ G+S +GGG ++G+ G R LQERLK FD + G ++ + + IADFPPSLQLVPCKPRLLDLA+D+LEFPD+DERAGIEK E+ + + A GGG+ GWVGWALGR+
Sbjct: 27 KLSLKVHEIAKDAQNRNGLRHGDYHQYRQYCTRRLKRVRSLPQVRFMFGKGKGFVQKELTPESVTSASHLEIPLMMAERAWAFAMQRKQETADAPYRVRRHVVTRLAKAAKWSGDLEALCLETADERTCLEATAYCAWMSGNLLLEKEAWREALDRFSTADRICQELGKVGAIEDQDLFSRRVEEIEPILRYCRYNLDAT---------ASEELLEMSREDSS-AGGDLLAAKLESVVAEARKKQASALDSVEWRGKKVAVRSETLRVALVKADELARRL---------------EAGGGSPGCEDPKPGQYLKVFGAYDDALGTISQETSRLQGKGGGAKMEAHRSELEGLRAYAQHHKLRLMLQRNERLVQELQEKRKAGG---------GGGERDPVGEVADIVHVYDALLQSVRSMVTNLGGGDDENDDIAELEDEVIESARADEARFRAFRCFFVIEAFSAQQKWAEASALFGHTRTLCQEAAEMLDDDDPRAESLTELDEMVQGAWHRTAAHALLLKSKQEAALSAGVDGIS----IGGGVNAGACPWAG-------RPLQERLKEFDPAGGGSGTA---------ERGSKKRTYRIADFPPSLQLVPCKPRLLDLAFDELEFPDIDERAGIEKEPEV-EEEPKGAAAGGGGISGWVGWALGRS 641
BLAST of mRNA_H-paniculata_contig209.5443.1 vs. uniprot
Match: A0A836CNG0_9STRA (Signal recognition particle subunit SRP68 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNG0_9STRA) HSP 1 Score: 395 bits (1015), Expect = 2.690e-123 Identity = 276/718 (38.44%), Postives = 381/718 (53.06%), Query Frame = 1
Query: 115 FSARLASVEPSSDTMMVVD--SPKLSLKVHEVAKDCQNQNGMRHGDYHQYRQYCTRRLKRVRSSRDVRFMFGKGKTFIQKELTPDLVTTSRHLEIPLMMSERAWSYAMQRKAE---TVGAPFRVRRQVVTRLAKAAKWASDLEALCLETADERTCLEATAYAAWMSGNLLLEREAWREALERFSTANKICQELGKVGRVEDQDLFTRRVEDIEPILRYCRYNLDSSSGTAHAAAAAEEHLIEMSRKGAAGAGGDLLAAKLESVVAEARKKQASALDSVQWRGEKVAVRFEALRVALVKADELARALGPTSSARSRSAGEGGESGGEGEGEDPKPGQYLKVFGAYDDALSTISTEASRLQGKGGGMKMGAHRAELESLRAYAQHHKLRLMLQRNERLVQGLQERRIAGGDAGVGGGGGNGAERDPVGEAADIVHVYDALLQSVRSMVANLGGGDDAGDDVTEEEDEL-----------IESARADEARFRAFRCFFVIEAFSAGQKWAEASALF-SHTRELCQEAVDMLDD------------DDPRAESLAQLDDMVQGAWHRTAAHALLVKNNQEASLSKGMGGVSNSGRVGGGDSGSHETTGVVVAVRERSLQERLKMFDSSAGHGXXXXXXXXXXXXKKQEQFERFAIADFPPSLQLVPCKPRLLDLAYD-DLEFPDLDERAGIEKVEEIVDAQTPSGAVNGGGVLGWVGWALGR 2178
F R+ S + +M V +PKLSL++HE K+ Q+ NG+RHGDY QYR YC+RRL+RVR+++ V+F FGKGK F +K LT D+ + LEIPLM +ER+W++AMQ K + + R ++ RL+KAAKWASDLE LC DERT LEA AYAA+M GN+LLE+E+W ALE+ +T +++C+ELG+VG + DQDLF+ R E+IEP +RYC+YNL + G A A E ++ ++ LLAAKL SVV+EAR +QA AL V W+ ++ VR + L VAL+ A E +R L +A G GG + ++V +DD + E + LQGKGGG ++ R EL L AYA+H KLRLM++RNE LV+GL++ G + ADIVH+Y AL+Q+VR M L A D + E ++ + ADEA +RA RCF++ EA++ KW EASAL SH LC EA+D +D R + + +L MV+G R AA L + + V G + T+ A+ +R+L ERL FD A + F I PP L +P KP LLD A++ L+FPDL RAG + + A G + G V WA GR
Sbjct: 106 FKQRVLSGNLGTGSMEVESEQAPKLSLRIHETIKEKQSANGLRHGDYLQYRHYCSRRLRRVRTNKQVKFTFGKGKQFTKKTLTLDMAKNAAFLEIPLMFAERSWAFAMQLKQDLGSSSSTSSAERHHLMRRLSKAAKWASDLETLCAAAGDERTALEACAYAAFMCGNVLLEKESWGGALEKLTTVHRVCRELGQVGDLADQDLFSARAEEIEPSVRYCKYNLSKAGG---ATTATESFSLD--QQNXXXXXXXLLAAKLASVVSEARLQQAKALAHVDWQARRIPVRGQGLSVALIAAREASRGL---EAALRTGGGVGGRN----------DALSVRVLNGWDDVAGEAAKETAALQGKGGGARVEGQRMELALLSAYAKHSKLRLMVKRNEALVEGLKQASTGGSEP----------------RNADIVHLYKALMQNVREMKDCLSVAAAATDLASSESADMXXXXXXEHEAALAEVEADEAWYRACRCFYLSEAYAEQGKWQEASALLESHAPSLCDEALDKAEDLADVQREGAKTQTLTRTDRIKELASMVEGGRLRAAASLYLAPHTEPKEQ------VDQDANEEGDEHEDSGTSPASEALPDRTLLERLYDFDDGADSTPAPADG-------SPAEPTTFRIEAIPPRLAPIPAKPLLLDGAFNLHLQFPDLSARAGAPEA-------AATAANTRGSLTGLVRWAFGR 769
BLAST of mRNA_H-paniculata_contig209.5443.1 vs. uniprot
Match: A0A7S2BZZ1_9STRA (Signal recognition particle subunit SRP68 n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BZZ1_9STRA) HSP 1 Score: 298 bits (762), Expect = 3.190e-88 Identity = 202/542 (37.27%), Postives = 293/542 (54.06%), Query Frame = 1
Query: 181 LSLKVHEVAKDCQNQNGMRHGDYHQYRQYCTRRLKRVRSSRDVRFMFGKGKTFIQKELTPDLVTTSRHL-EIPLMMSERAWSYAMQRKAETVGAPFR--VRRQVVTRLAKAAKWASDLEALCLETADERTCLEATAYAAWMSGNLLLEREAWREALERFSTANKICQELGKVGRVEDQDLFTRRVEDIEPILRYCRYNLDSSSGTAHAAAAAEEHLIEMSRKGAAGAGGDLLAAKLESVVAEARKKQASALDSVQWRGEKVAVRFEALRVALVKADELARALGPTSSARSRSAGEGGESGGEGEGEDPKPGQYLKVFGAYDDALSTISTEASRLQGKGGGMKMGAHRAELESLRAYAQHHKLRLMLQRNERLVQGLQER------RIAGGDAGVGGGGGNGAERDPVGEAADIVHVYDALLQSVRSMVANLGGGDDAGDDVTEEEDELIESARADEARFRAFRCFFVIEAFSAGQKWAEASALFSHTRELCQEAVDMLDDDDPRAESLAQ---LDDMVQGAWHRTAAHALLVKNNQEASLSK 1770
++L+VHE Q NG+RHGDY Q TRRL+RVR + F +G+G+ F+Q+ELT + V S L +PL+ SERAW+YAMQ K E V ++ RL KA +W++ E LC AD+ T LEA AYA+WM+ NL LER W ALE+++TA++IC+++G VG VE QDLFT+R E+I +R+C YNL S ++ A G+GGDLL A+L++V+ +ARK+QA L+ + WR +AVR E LR+A+V A EL L T++ +D QY KV A +DAL +++ S L GG K+ A R +L L Y H KL M +R++RLV L+E + + A + P DIVH+Y +L Q ++ M+A G EE+D+L ++ +A A RA RC+F+ E +S K +EA L+ H ++ +A D+L+ + + LA+ L V GA R A A L ++EA S+
Sbjct: 14 IALRVHETISSLQGLNGLRHGDYEQXXXXATRRLRRVRKGAN--FTYGRGRQFVQRELTAEDVEASAPLLMVPLLNSERAWAYAMQLKQEITRGEGNAAVSNHLLRRLTKAVQWSAAFEELCKVRADDATRLEANAYASWMAANLDLERGEWAGALEKYTTAHRICEDMGTVGSVELQDLFTQRAEEIRQSIRFCNYNLTGGSSSSTDAPPT-----------LTGSGGDLLQAQLDAVLVDARKRQAQTLEELTWRSHTIAVRDETLRLAIVSARELDGDLESTTA------------------DDRSDNQYSKVLNACEDALKIVNSNISSLATMTGGTKLEAQREDLRLLSGYLSHIKLTRMFERSKRLVLELRESWKIHTLTFSANKSSAA------AAKSPA-RPEDIVHLYGSLTQILQDMLALPG---------VEEDDDLADALQAKLASVRAHRCYFLAETYSTNAKSSEALVLYDHAAQIAAQASDLLETCEDVQDELAEITLLQGAVSGAKSRAQAQAFLSSKSKEAPASE 508
BLAST of mRNA_H-paniculata_contig209.5443.1 vs. uniprot
Match: A0A7S2B7L4_9STRA (Signal recognition particle subunit SRP68 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B7L4_9STRA) HSP 1 Score: 293 bits (750), Expect = 2.030e-86 Identity = 217/590 (36.78%), Postives = 310/590 (52.54%), Query Frame = 1
Query: 178 KLSLKVHEVAKDCQNQNGMRHGDYHQYRQYCTRRLKRVRSSRDVRFMFGKGKTFIQKELTPDLVTTSRHLEIPLMMSERAWSYAMQRKAETVG---APFRVRRQVVTRLAKAAKWASDLEALCLETADERTCLEATAYAAWMSGNLLLEREAWREALERFSTANKICQELGKVGRVEDQDLFTRRVEDIEPILRYCRYNLDSSSGTAHAAAAAEEHLIEMSRKGAAGAGGDLLAAKLESVVAEARKKQASALDS---VQWRGEKVAVRFEALRVALVKADELARALGPTSSARSRSAGEGGESGGEGEGEDPKPGQYLKVFGAYDDALSTISTEASRLQGKGGGMKMGAHRAELESLRAYAQHHKLRLMLQRNERLVQGLQERRIAGGDAGVGGGGGNGAERDPVGEAADIVHVYDALLQSVRSMVANLGGGDDAGDDVTEEEDELIESARADEARFRAFRCFFVIEAFSAGQKWAEASALFSHTRELCQEAVDMLD----DDDPRAESLAQ-------LDDMVQGAWHRTAAHALLVKNNQEASLSKGMGGVSNSGRVGGGDSGSHETTGVVVAVRERSLQERLKMFDS 1896
K LK+HEV Q NGMRH DY YR++ TRRL++VR S + F +G+G+ F++KE+T + + HL I L+ +ERAW+YAMQ K +T+ + + ++ R KA KW++ LE L AD RTCLE AYA+WMS NL +E+EAW +ALE F+TA++IC+ELGKVG +E QDLFT+R E+I +RYC YN+ S G A A + ++ S + L A+L++V A ASA+D+ ++WR K+ + E LR +VKA E+ R L T+ E+ K QY KV AYDDAL T+ST+ +L GG K A R +L L + KL ML+RN++L GL+ A A GG A P DIVH+YDA+ Q + M+ G E++D+L++ +A RA RCFF+ E +S + ++A AL++H + A D L+ +D+ A+S+ Q L GA R A A L DS S++ T V V RSLQER+ ++D+
Sbjct: 15 KAELKIHEVVAKLQQLNGMRHSDYEAYRRFLTRRLRKVRKS--INFTYGRGRNFVKKEITAENAQPA-HLMILLLNTERAWAYAMQLK-QTMNRGESENHLANHMLRRFTKAVKWSTALEQLSGNLADGRTCLEINAYASWMSANLYVEQEAWSKALENFTTAHRICEELGKVGSLEQQDLFTQRSEEITQSIRYCNYNMGSDKGEGGVAEAMADGGMQSSAE---------LEAQLDAVTAST----ASAVDNKDMMEWRHHKIPIHDEDLRKQVVKAKEVDRNLDTTAL------------------EERKESQYFKVINAYDDALHTLSTKLDKLSEVSGGAKAEAMRRDLSLLTGALSYLKLSRMLERNKQLATGLRATWRAETLARAGG-----ANARP----EDIVHLYDAVGQIYQDMIKLTG---------VEDDDDLMDEFQAKMMLNRACRCFFLAETYSNNSRPSDALALYNHANNIAIAAADQLETLRPEDETEAKSVEQELEQVRELQSEAAGARSRVQAQAFLRSQ----------------------DSKSNDETTVDDRVIIRSLQERIHIYDA 529
BLAST of mRNA_H-paniculata_contig209.5443.1 vs. uniprot
Match: A0A6A7G753_9CRUS (Signal recognition particle subunit SRP68 n=2 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7G753_9CRUS) HSP 1 Score: 279 bits (714), Expect = 3.540e-81 Identity = 211/643 (32.81%), Postives = 332/643 (51.63%), Query Frame = 1
Query: 178 KLSLKVHEVAKDCQNQNGMRHGDYHQYRQYCTRRLKRVRSSRDVRFMFGKGKTFIQKELTPDLVTTSRHLEIPLMMSERAWSYAMQRKAETVGAPFRVRRQVVTRLAKAAKWASDLEALCLETADERTCLEATAYAAWMSGNLLLEREAWREALERFSTANKICQELGKVGRVEDQDLFTRRVEDIEPILRYCRYNLDSSSGTAHAAAAAEEHLIEMSRKGAAGAGGDLLAAKLESVVAEARKKQASALDSVQWRGEKVAVRFEALRVALVKADELARALGPTSSARSRSAGEGGESGGEGEGEDPKPGQYLKVFGAYDDALSTISTEASRLQGKG-GGMKMGAHRAELESLRAYAQHHKLRLMLQRNERLVQGLQERRIAGGDAGVGGGGGNGAERDP-VGEAA----DIVHVYDALLQSVRSMVANLGGGDDAGDDVTEEEDELIESARADEARFRAFRCFFVIEAFSAGQKWAEASALFSHTRELCQEAVDMLDDDDPRAESLAQLDDMVQGAWHRTA---AHALLVKNNQEASLSKGMGGVSNSGRVGGGDSGSHETTGVVVAVRERSLQERLKMFDSSAGHGXXXXXXXXXXXXKKQEQFERFAIADFPPSLQLVPCKPRLLDLAYDDLEFPDLDERA 2079
K++L + V K Q QNG+RH DY +YRQYCTRRL+RVR + ++F G+ K F+++ + + R+L IPLM +ERAW+YAMQ+K E R R ++ RL KAA W+S L LC AD RT LEA AY +WM+GN+LLERE W +ALE+F A + +L K+G +E L R E++ P ++YC Y L SS+G + L++ G ++L +K+E+V+++ R +QA + D++QW+GE V + E +R+++++++EL L +A + + +++VF +YD+AL + + K G + G L LR Y HKLR + RN L + L A D+ N +++ P +G+ + D+V +Y+ LL +V NLG + G+ + E L + R A F +FRCF+V E+++A KWAEA AL+ E C A+ + + + + L+ + A R AH LL +QE S++ + ++ R SH + + + +L +RL FDS + E + + FPP + +PCKP L DLA++ +EF DL RA
Sbjct: 10 KVTLPILAVIKTSQQQNGLRHNDYRRYRQYCTRRLRRVRKT--LKFTHGR-KNFVKRTVELKDIKDERYLLIPLMQAERAWAYAMQQKHEMTDDRDRSRFHLIRRLTKAAFWSSQLTKLCSVAADARTALEAEAYCSWMNGNILLEREIWSDALEKFVHAKTVFDQLSKLGNLEQNALCHERSENLGPSIKYCSYVLGSSAG---GDGSLNSELLKDR-----GTLDEILLSKVENVMSDIRTQQAKSFDTIQWKGEYVPIHNEKVRLSILRSNELTSQLDGQENA------------------EKQMDLFIEVFSSYDEALVFVRNDLQNEANKRVRGSEPGPREVALGLLRDYLTFHKLRNTIHRNLLLTESL----TASLDSE------NNSDQPPSIGKKSVKPSDLVVMYEKLLNNVE----NLG---EVGEMKSNES--LHQEVRLKTAVFTSFRCFYVAESYAAALKWAEAYALYQRCVEHCLAAIQLFRSLEINSTEIVSLEKLSSNASARRVFVHAHGLLALEDQENSITSNVSKLAIDDRK-----DSH----LKLFDPKPTLLQRLNTFDSGSPQ-------------------EHYNLIHFPPRFEAIPCKPILFDLAFNYVEFRDLSHRA 576
BLAST of mRNA_H-paniculata_contig209.5443.1 vs. uniprot
Match: A0A662XA20_9STRA (Signal recognition particle subunit SRP68 n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XA20_9STRA) HSP 1 Score: 270 bits (691), Expect = 1.530e-77 Identity = 218/701 (31.10%), Postives = 335/701 (47.79%), Query Frame = 1
Query: 121 ARLASVEPSSDTMMVVDSPKLSLKVHEVAKDCQNQNGMRHGDYHQYRQYCTRRLKRVRSSRDVRFMFGKGKTFIQKELTPDLVTTSRHLEIPLMMSERAWSYAMQRKAET--------VGAPFRVRRQVVTRLAKAAKWASDLEALCLETADERTCLEATAYAAWMSGNLLLEREAWREALERFSTANKICQELGKVGRVEDQDLFTRRVEDIEPILRYCRYNLDSSSGTAHAAAAAEEHLIEMSRKGAAGAGGDLLAAKLESVVAEARKKQASALDSVQWRGEKVAVRFEALRVALVKADELARALGPTSSARSRSAGEGGESGGEGEGEDPKPGQYLKVFGAYDDALSTISTEASRL--QGKGGGMKMGAHRAELESLRAYAQHHKLRLMLQRNERLVQGLQERRIAGGDAGVGGGGGNGAERDPVGEAADIVHVYDALLQSVRSMVANLGGGDDAGDDVTEEEDELIESARADEARFRAFRCFFVIEAFSAGQKWAEASALFSHTRELCQEAVDMLDDDDPRAESLAQ-----LDDMVQGAWHRTAAHALLVKNNQEASLSKGMGGVSNSGRVGGGDSGSHETTGVVVAVRERSLQERLK-MFDSSAGHGXXXXXXXXXXXXKKQEQFERFAI------ADFPPSLQLVPCKPRLLDLAYDDLEFPDLDERAGIEKVEEIVDAQTPSGAVNGGGVLGW 2157
A+ A + D M D S+ + E K Q QNG+RH D+ +YRQYCTRRL+R+R S V+F GKGK F+ K++ + + +RHL +PL +ERAWSYAMQ K + A R++ + RL KAA W+ L A+C AD RT LEA AYAA+M+GNL RE AL++F+TA +I +L +VG ++LF+R ++++P +R+C + L +A +AE +EM G GA LL +K++ V+ EARK++ ++L SV W+ +++AV + L +A+V+ DELA L +SR A +L++ AYD L + T S L Q K G + + L +L YA+ KL ++R + + L+ R A +A ++ H+ D L+QSV ++A G + E E A +A FRA R +A+ K+AEA AL+ + EA D+L + L Q L + + GA RTAA + L + ++ + E + A ++ ++R K D+ A ++Q+QFE ++ PP + VPCKP L D+A+++LEFPDL ER ++ + GG GW
Sbjct: 2 AKGAKPSGAQDVAMAADEV-FSIPILETVKAAQLQNGLRHRDFQRYRQYCTRRLRRIRKS--VKFTHGKGKQFVNKKVDAETSSEARHLYLPLYNAERAWSYAMQLKEDDNLEKSENGEDANSRIKFHLNGRLRKAADWSQRLVAICAAKADARTGLEAEAYAAFMAGNLAFHREEHAAALDQFATARRIYADLSQVGTSSQKELFSRGADELQPFIRFCEHRLALHG---RSAGSAEASSLEMQSSGD-GASNALLQSKIDLVLLEARKQKVASLGSVGWKQQQLAVPTQELGLAVVRTDELAAKLEAARDDKSREA------------------LFLELLSAYDALLQALKTATSALEQQAKSGVALVHSDLELLAALEEYARFQKLAKQVERQASVYRALKLRSSAQ-------------------QAGELTHILDMLVQSVGDILAIPG--------LQELEPRRAAQYGAYQAAFRACRASTAAQAYQLQHKFAEALALYQYASGFLAEADDVLAAHPAAKDELLQKLTRELHEELAGAASRTAAQSFLESATRADAVRAEL-----------------EQLSLASAEAKKEAKKRKKRQVDALA---------------ERQDQFEAGSVDGLHELVKLPPEFRAVPCKPLLFDVAFNELEFPDLSERTKTDEEKXXXXXXXXXXXXXAGGFFGW 618
BLAST of mRNA_H-paniculata_contig209.5443.1 vs. uniprot
Match: W4G3I1_9STRA (Signal recognition particle subunit SRP68 n=11 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G3I1_9STRA) HSP 1 Score: 269 bits (687), Expect = 2.780e-77 Identity = 216/675 (32.00%), Postives = 320/675 (47.41%), Query Frame = 1
Query: 163 VVDSPKLSLKVHEVAKDCQNQNGMRHGDYHQYRQYCTRRLKRVRSSRDVRFMFGKGKTFIQKELTPDLVTTSRHLEIPLMMSERAWSYAMQRKAETVG--------APFRVRRQVVTRLAKAAKWASDLEALCLETADERTCLEATAYAAWMSGNLLLEREAWREALERFSTANKICQELGKVGRVEDQDLFTRRVEDIEPILRYCRYNLDSSSGTAHAAAAAEEHLIEMSRKGAAGAGGDLLAAKLESVVAEARKKQASALDSVQWRGEKVAVRFEALRVALVKADE-LARALGPTSSARSRSAGEGGESGGEGEGEDPKPGQYLKVFGAYDDALSTISTEASRLQGKGGGMKMGAHRAELESLRAYAQHHKLRLMLQRNERLVQGLQERRIAGGDAGVGGGGGNGAERDPVGEAADIVHVYDALLQSVRSMVANLGGGDDAGDDVTEEEDELIESARADEARFRAFRCFFVIEAFSAGQKWAEASALFSHTRELCQEAVDMLDDDDPRAESLAQLDDMVQGAWHRTAAHALLVKNNQEASLSKGMGGVSNSGRVGGGDSGSHETTGVVVAVRERSLQERLKMFDSSAGHGXXXXXXXXXXXXKKQEQFERFAIADFPPSLQLVPCKPRLLDLAYDDLEFPDLDERAGIEKVEEIVDAQTPSGAVNGGGVLGWV 2160
V+ LSL + E K Q QNG+R GDY +YRQ+C RRL+R+R ++F+ G+GK FI K++TP+ + RHL +PL SERAWSYAMQ + + A R++ ++ RL KA W+ L ALC+E AD RT LEA AYA++M GNL L +E W+ ALE+FSTA +I EL KVG V +DL + +++I P +RYC YNL +S + ++ R+ A LL AK++ V E K +A L ++ WRG + + + VAL++ DE LA+ T + + R A Y+ +FG YD L ++ E ++ G A R + L Y ++ K +++RN L+ L+ R D G G D+VH+ D L+++V M A G D A RA + F A RC +V + + K++E++ALF +A + DD E LA L+ V GA R A L +A+ ++ + RVG G H T A +SL ER + S + + PP+LQ +P KP L D+A+ +++ P++D R + D T G GG LGW+
Sbjct: 16 VLSDQPLSLPILETIKFSQQQNGLRFGDYTRYRQHCARRLRRLRKG--LKFLHGRGKQFIPKDVTPENASEVRHLMLPLYHSERAWSYAMQLREDERNDKEEHGDEASSRIKFHLLGRLKKAVAWSDKLTALCVERADVRTNLEAEAYASYMGGNLALYQEEWKVALEKFSTAQRIYSELAKVGTVVQRDLLHQILDEISPFMRYCEYNLGGTSSSLS---------LQELRESTTSA---LLQAKIDQVFHEEAKTKAKDLAAITWRGRAIPIPSADVSVALIRPDEHLAKLKKGTDNDKKRDA------------------IYVDLFGCYDTILRLLAAEKTKSDTMKSGFMAEAQRENIAFLDEYIRYVKQTHVIERNVALLTQLKARLEV--DLGPG----------------DLVHILDMLIRNVDDMAAIPGAADHAP----------FLKYRALQLIFHALRCTYVAQVYLGLNKFSESAALFDQAHAYFTQAQSLHTDDAVVREFLADLEPQVVGAHSRVNALGFL----HDATATEAV-------RVGLGQLHVHPPT--TAAASSKSLLERQHEYASG-------------------NPATHYDLVTLPPTLQPIPVKPLLFDIAFTEMDDPNVDAR--------VQDKATGGG----GGFLGWL 586
BLAST of mRNA_H-paniculata_contig209.5443.1 vs. uniprot
Match: A0A024TMN8_9STRA (Signal recognition particle subunit SRP68 n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TMN8_9STRA) HSP 1 Score: 261 bits (668), Expect = 1.520e-74 Identity = 194/588 (32.99%), Postives = 292/588 (49.66%), Query Frame = 1
Query: 160 MVVDSPKLSLKVHEVAKDCQNQNGMRHGDYHQYRQYCTRRLKRVRSSRDVRFMFGKGKTFIQKELTPDLVTTSRHLEIPLMMSERAWSYAMQRKAETVG--------APFRVRRQVVTRLAKAAKWASDLEALCLETADERTCLEATAYAAWMSGNLLLEREAWREALERFSTANKICQELGKVGRVEDQDLFTRRVEDIEPILRYCRYNLDSSSGTAHAAAAAEEHLIEMSRKGAAGAGGDLLAAKLESVVAEARKKQASALDSVQWRGEKVAVRFEALRVALVKADE-LARALGPTSSARSRSAGEGGESGGEGEGEDPKPGQYLKVFGAYDDALSTISTEASRLQGKGGGMKMGAHRAELESLRAYAQHHKLRLMLQRNERLVQGLQERRIAGGDAGVGGGGGNGAERDPVGEAADIVHVYDALLQSVRSMVANLGGGDDAGDDVTEEEDELIESARADEARFRAFRCFFVIEAFSAGQKWAEASALFSHTRELCQEAVDMLDDDDPRAESLAQLDDMVQGAWHRTAAHALLVKNNQEASLSKGMGGVSNSGRVGGGDSGSHETTGVVVAVRERSLQERLKMFDS 1896
+V+D P LSL + E K Q QNG+R GDY +YRQ+C RRL+R+R ++F+ GKGK F+ KE+TPD+ + RHL +PL SERAWSYAMQ + + A R++ ++ RL KA W+ L ALC E AD RT LEA AYA++MSGNL L +E W+ ALE+FSTA +I EL KVG V QDL + +++I P +RYC YNL SS + ++ R+ A LL +K++ V E K +A + ++ WRG + + + VALV+ +E LA+ T + + R A Y+ +FG YD L ++ E + G AHR + +L Y ++ K ++ RN L L+ R + GG G G D++H+ D L+++V M A + G D G ++ +A + F AFRC +V + + K+ E++AL+ + +A+ + DD + +++L+ V GA R A L N ++ + G + T A RSL ER + S
Sbjct: 16 VVLDQP-LSLPILETIKFSQQQNGLRFGDYTRYRQHCARRLRRLRKG--LKFVHGKGKQFVPKEVTPDIASEVRHLMLPLYHSERAWSYAMQLREDERNDKDEHGDEASSRIKFHLLGRLKKAVAWSDKLTALCAERADVRTNLEAEAYASYMSGNLALYKEEWKVALEKFSTAQRIYSELAKVGTVVQQDLLHQILDEISPFMRYCEYNLGGSSSLS----------LQELRESTTSA---LLQSKIDQVFHEEAKTKAKDMAAITWRGRAIPIPNSDVSVALVRPEEHLAKLKKGTDNDKKRDA------------------IYVDLFGCYDMILRLLAAEKIKTDTMKSGFMADAHRENVTALDEYVRYIKQTHVIDRNVVLFTQLKSR-LGGGGVGPG----------------DLIHILDMLIRNVDDMAA-IPGTTDHGP---------FKAYQALQCTFHAFRCNYVAQVYVGQNKFPESAALYDQAKTYLMQAMSLESDDATVRQFISELEPQVMGAHSRVNALGFLHDANTTEAVRVCL--------------GQLQVTPAAGATTTRSLLERQNEYSS 528
BLAST of mRNA_H-paniculata_contig209.5443.1 vs. uniprot
Match: A0A8K1CTH6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CTH6_PYTOL) HSP 1 Score: 259 bits (661), Expect = 2.490e-73 Identity = 208/691 (30.10%), Postives = 333/691 (48.19%), Query Frame = 1
Query: 139 EPSSDTMMV-VDSPKLSLKVHEVAKDCQNQNGMRHGDYHQYRQYCTRRLKRVRSSRDVRFMFGKGKTFIQKELTPDLVTTSRHLEIPLMMSERAWSYAMQRKAET------VG--APFRVRRQVVTRLAKAAKWASDLEALCLETADERTCLEATAYAAWMSGNLLLEREAWREALERFSTANKICQELGKVGRVEDQDLFTRRVEDIEPILRYCRYNLDSSSGTAHAAAAAEEHLIEMSRKGAAGAGGDLLAAKLESVVAEARKKQASALDSVQWRGEKVAVRFEALRVALVKADELARALGPTSSARSRSAGEGGESGGEGEGEDPKPGQYLKVFGAYDDALSTISTEASRLQGKGGGMKMGAHRAELESLRAYAQHHKLRLMLQRNERLVQGLQERRIAGGDAGVGGGGGNGAERDPVGEAADIVHVYDALLQSVRS--MVANLGGGDDAGDDVTEEEDELIESAR--ADEARFRAFRCFFVIEAFSAGQKWAEASALFSHTRELCQEAVDMLD-----DDDPRAESLAQLDDMVQGAWHRTAAHALLVKNNQEASLSKGMGGVSNSGRVGGGDSGSHETTGVVVAVRERSLQERLKMFDSSAGHGXXXXXXXXXXXXKKQEQFERFAIADFPPSLQLVPCKPRLLDLAYDDLEFPDLDERAGIEKVEEIVDAQTPSGAVNGGGVLGW 2157
E ++D +M ++ S+ + E K Q QNG+RH D+ +YRQYCTRRL+R+R S +F GKGK F+ K++ + T +R L +PL +ERAWSYAMQ K + +G A R++ + RL KAA+W+ L +C AD RT LEA AYAA+M GNL RE AL++F+TA +I +L +VG + ++LF VE++EP +R+C + L S G +++ ++ S G + A LL +K++ V+ EARK++ + L ++ W+ +++AV + + +AL++ DE+ L + + E + +L++ +YD L I E ++LQ + H E+E+L A ++ + ++ ERLV ++ R A + D+ HV D L+Q+V M+ NL E E + A+ A ++ FR+ R + + + + +K+ EA AL+ + EA D L D E + L D + GA RT A + L + QE ++ K + R +SL ER F+ G I PP+ Q +PCKP L D+A+++LEFPD+ ERA E+ E+ +A + A G G GW
Sbjct: 4 EKAADVVMADANAEVYSIPILETVKAAQLQNGLRHRDFQRYRQYCTRRLRRLRKSS--KFTHGKGKAFVNKKVDAETATDARLLYLPLYNAERAWSYAMQLKEDDNTEKMELGDDANSRIKFHLTGRLRKAAEWSQRLVEICAARADARTSLEAEAYAAFMMGNLAFHREEHERALDKFATARRIYSDLSQVGTLSQKELFRNHVEELEPFIRFCEHRL-SLLGKLKGKTSSQ---VDWSTSGES-ASNALLQSKIDMVLLEARKQKVATLATISWKQKELAVPTQEIGLALLRPDEITAKLEKIAVSD----------------EKKREIVFLELLSSYDTTLQLIKAETAKLQQQSKSGSALVH-TEIEALTALDEYVRFLKATRQVERLVAVYKQLRAAD---------------SKTRQLGDLTHVLDMLVQAVGDILMLPNLN------------EAEKLHFAKYTAYQSLFRSIRAATIAQTYVSSRKFPEAQALYQYASGFLAEAEDTLSIHPAATDVVLQEFMKDLGDELTGAQSRTTAQSFLQSSKQEDAVRKNL---------------EQLNLEDGKKARHKSLLERQDEFNGGTSKGLHE-------------------IVQLPPAFQPIPCKPILFDIAFNELEFPDISERAKTEE-EKAAEAAKQNAAAGGSGFFGW 608
BLAST of mRNA_H-paniculata_contig209.5443.1 vs. uniprot
Match: M4BVL8_HYAAE (Signal recognition particle subunit SRP68 n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BVL8_HYAAE) HSP 1 Score: 257 bits (657), Expect = 1.070e-72 Identity = 208/677 (30.72%), Postives = 323/677 (47.71%), Query Frame = 1
Query: 181 LSLKVHEVAKDCQNQNGMRHGDYHQYRQYCTRRLKRVRSSRDVRFMFGKGKTFIQKELTPDLVTTSRHLEIPLMMSERAWSYAMQRKAET--------VGAPFRVRRQVVTRLAKAAKWASDLEALCLETADERTCLEATAYAAWMSGNLLLEREAWREALERFSTANKICQELGKVGRVEDQDLFTRRVEDIEPILRYCRYNLDSSSGTAHAAAAAEEHLIEMSRKGAAGAGGDLLAAKLESVVAEARKKQASALDSVQWRGEKVAVRFEALRVALVKADELARALGPTSSARSRSAGEGGESGGEGEGEDPKPGQYLKVFGAYDDALSTISTEASRL--QGKGGGMKMGAHRAELESLRAYAQHHKLRLMLQRNERLVQGLQERRIAGGDAGVGGGGGNGAERDPVGEAADIVHVYDALLQSVRSMVANLGGGDDAGDDVTEEEDELIESARADEARFRAFRCFFVIEAFSAGQKWAEASALFSHTRELCQEAVDMLD-----DDDPRAESLAQLDDMVQGAWHRTAAHALLVKNNQEASLSKGMGGVSNSGRVGGGDSGSHETTGVVVAVRE-RSLQERLKMFDSSAGHGXXXXXXXXXXXXKKQEQFERFAIADFPPSLQLVPCKPRLLDLAYDDLEFPDLDERA--GIEKVEEIVDAQTPSGAVNGGGVLGW 2157
LS+ + E K Q QNG+RH D+ +YRQYCTRRL+R+R S V+F GKGK FI K++ + T R L +PL +ERAW+YAMQ K + A R++ + RL KAA+W+ L A+C AD RT LEA AYAA+M+GNL RE EALE+F T +I +L +VG ++LF+R ++++P +R+C + L T + AE +E+ + G+ GA LL +K+E V+ EARK++ + L SV+W+ +++ V + + +A+V+ DELA L + ++R A ++L++ AYD L T+ + +L Q K G + + L +L YA+ KL L+R + + L++ A +A ++ H+ D L+Q+V ++ G + E E A A FRA R + + + + EA AL+ + EA D+L DD E +L + GA R A + L + ++ + +S SG+ ++G R R+L +R F++ G + PP + VPCKP L D+A+ +LEFPDL +R E+ E DA GG GW
Sbjct: 18 LSVPILETVKTAQLQNGLRHRDFQRYRQYCTRRLRRIRKS--VKFTHGKGKQFINKKVDAETATEHRLLYLPLYKAERAWAYAMQLKEDDNLDKLENGEDANSRIKFHLTGRLRKAAEWSQRLAAICTVRADARTSLEAEAYAAYMAGNLAFHREEHVEALEKFGTVRRIYVDLSQVGTFSQKELFSRSADELQPFIRFCEHRLALQGRTG---SPAETSSLEL-QAGSEGANNSLLQSKIELVLLEARKQKVANLGSVEWKQQQLTVPTQEIGLAVVRTDELAAKLEAAQNEKAREA------------------RFLELLSAYDALLHTLKSATMKLEQQAKSGSALVHSDLELLAALEEYARFKKLTKQLERQATVYRTLKQCFSAQ-------------------QAGELTHILDMLVQTVGDILIIPG--------LHELEPRRASQYSAYHAVFRACRATTIAQTYLLQHGFGEAMALYQYASRFLIEAEDILAAQPAAKDDLLQEFTRELHRELAGAVSRATAESFLRSSTCADAMRLELDQLSLSGK----ETGKKGXXXXXXXKRRVRTLVDRQNEFEAGTVEGHRE-------------------LVKLPPEFRAVPCKPLLFDVAFKELEFPDLTQRTKTDAERAAETADASAT------GGFFGW 614 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig209.5443.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig209.5443.1 >prot_H-paniculata_contig209.5443.1 ID=prot_H-paniculata_contig209.5443.1|Name=mRNA_H-paniculata_contig209.5443.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=718bp MEVAAATKSVGGRGGGDGDGGQQELQNGFSARLASVEPSSDTMMVVDSPKback to top mRNA from alignment at H-paniculata_contig209:28452..34998- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig209.5443.1 ID=mRNA_H-paniculata_contig209.5443.1|Name=mRNA_H-paniculata_contig209.5443.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6547bp|location=Sequence derived from alignment at H-paniculata_contig209:28452..34998- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig209:28452..34998- >mRNA_H-paniculata_contig209.5443.1 ID=mRNA_H-paniculata_contig209.5443.1|Name=mRNA_H-paniculata_contig209.5443.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=4308bp|location=Sequence derived from alignment at H-paniculata_contig209:28452..34998- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |