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Homology
BLAST of mRNA_H-paniculata_contig2088.5437.1 vs. uniprot
Match: D8LMB8_ECTSI (Bardet-Biedl syndrome 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMB8_ECTSI) HSP 1 Score: 268 bits (684), Expect = 8.490e-78 Identity = 145/198 (73.23%), Postives = 162/198 (81.82%), Query Frame = 1
Query: 787 QARQDSRRVEVRIRCDSMELAGDAVQDLCRFLQVDALESTAHFPREMEDLRRRMEGVANYNGLRQQLTADMADSSQRVKAFVVRAEDARLLGDMPLMRKLYAELQTLNRKMIGEYAKRANNHQALLESLKEVKQAVQKASNLRVGQPKTRVVADCRTAIKANSADVLVQVICDGFDPRGGDSVDNRVNNENGAIVLSP 1380
QAR +R VEVRIRCDSMELAG+ VQDL RFL+V LESTAHFP EME LR MEGV +YN LRQQLTADMADSSQRVKA+VVRAEDARLLGDMPL+RK+YAEL LNR+++GEYAKRANNH ALL +LKEVKQ VQKASNLR+GQ KTRVV+DCR AIKAN+AD LVQVI DG DP G V + + + G L P
Sbjct: 520 QARLKAR-VEVRIRCDSMELAGEVVQDLGRFLEVTELESTAHFPDEMEVLRDVMEGVVDYNSLRQQLTADMADSSQRVKAYVVRAEDARLLGDMPLVRKMYAELNNLNRRLVGEYAKRANNHHALLAALKEVKQTVQKASNLRIGQAKTRVVSDCRAAIKANNADGLVQVISDGLDPLGAGIVPSTTDGQGGQSRLVP 716
BLAST of mRNA_H-paniculata_contig2088.5437.1 vs. uniprot
Match: A0A7S3XR61_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XR61_HETAK) HSP 1 Score: 196 bits (498), Expect = 1.100e-55 Identity = 98/174 (56.32%), Postives = 132/174 (75.86%), Query Frame = 1
Query: 811 VEVRIRCDSMELAGDAVQDLCRFLQVDALESTAHFPREMEDLRRRMEGVANYNGLRQQLTADMADSSQRVKAFVVRAEDARLLGDMPLMRKLYAELQTLNRKMIGEYAKRANNHQALLESLKEVKQAVQKASNLRVGQPKTRVVADCRTAIKANSADVLVQVICDGFDPRGGDS 1332
+V ++C+ MELA + QDLC+ L+V LES A FP EME+ + + V+++N +R +L ADMAD+S RVK V++AEDAR+LGDM LMR++YA+L TLNR+++ EY KRANNHQALL SLKEV +QKASNLR+G K+RVV++CR AIK N+ L Q+I +G DPRG +S
Sbjct: 57 TQVTVQCNDMELASEVAQDLCKGLKVRELESAADFPDEMEEFKEVLRKVSDHNAVRLRLMADMADASNRVKGLVIQAEDARILGDMALMRRIYADLYTLNRQLVTEYVKRANNHQALLNSLKEVNHMIQKASNLRMGSAKSRVVSECRNAIKVNNIKSLFQIIKEGHDPRGANS 230
BLAST of mRNA_H-paniculata_contig2088.5437.1 vs. uniprot
Match: A0A7S2N0E0_9DINO (Hypothetical protein n=1 Tax=Alexandrium andersonii TaxID=327968 RepID=A0A7S2N0E0_9DINO) HSP 1 Score: 173 bits (438), Expect = 1.190e-45 Identity = 95/170 (55.88%), Postives = 119/170 (70.00%), Query Frame = 1
Query: 817 VRIRCDSMELAGDAVQDLCRFLQVDALESTAHFPREMEDLRRRMEGVANYNGLRQQLTADMADSSQRVKAFVVRAEDARLLGDMPLMRKLYAELQTLNRKMIGEYAKRANNHQALLESLKEVKQAVQKASNLRVGQPKTRVVADCRTAIKANSADVLVQVICDGFDPRGG 1326
V IR D +E+AG+ VQDLC FLQV ESTA+FP EME + + V YN +R +LTA+MADS+ VKA +V+AED R+L DM ++K++A LQ N ++I EY+KRANNHQ LL LKEV +QKA+ LRVG PKTRVVA CR AIK N+ L Q+I G D GG
Sbjct: 189 VTIRTDDIEVAGEMVQDLCGFLQVAEQESTANFPDEMEKFKAVLMKVDEYNAVRLKLTAEMADSANLVKALIVKAEDYRMLSDMGNLKKVFAGLQNTNGELIAEYSKRANNHQQLLGQLKEVNMMIQKAAKLRVGSPKTRVVAACRQAIKKNNIHELFQIIRTGQDTSGG 358
BLAST of mRNA_H-paniculata_contig2088.5437.1 vs. uniprot
Match: A0A812SRY6_SYMPI (Bbs2 protein n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812SRY6_SYMPI) HSP 1 Score: 166 bits (419), Expect = 4.240e-45 Identity = 90/169 (53.25%), Postives = 115/169 (68.05%), Query Frame = 1
Query: 817 VRIRCDSMELAGDAVQDLCRFLQVDALESTAHFPREMEDLRRRMEGVANYNGLRQQLTADMADSSQRVKAFVVRAEDARLLGDMPLMRKLYAELQTLNRKMIGEYAKRANNHQALLESLKEVKQAVQKASNLRVGQPKTRVVADCRTAIKANSADVLVQVICDGFDPRG 1323
+ IR D ME AG+ VQDLC FLQV LES+A+FP EME ++ + V YN +R +LTA+MADS+ VKA +V+AED R+L DM ++K+++ LQ N +I EY KRANNHQ LL LKEV +QKA+ LR+G K RVVA CR AIK N+ L Q+I G D G
Sbjct: 9 ITIRTDDMETAGEMVQDLCSFLQVSELESSANFPSEMEKFQQVLTRVDEYNAVRMKLTAEMADSANLVKALIVKAEDYRMLSDMQHLKKVFSGLQQTNSDLIAEYNKRANNHQQLLSQLKEVNMMIQKAAKLRMGNAKGRVVAACRQAIKQNNIMGLFQIIRTGHDASG 177
BLAST of mRNA_H-paniculata_contig2088.5437.1 vs. uniprot
Match: A0A7S2S5V3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S5V3_9STRA) HSP 1 Score: 177 bits (448), Expect = 1.910e-44 Identity = 92/166 (55.42%), Postives = 125/166 (75.30%), Query Frame = 1
Query: 811 VEVRIRCDSMELAGDAVQDLCRFLQVDALESTAHFPREMEDLRRRMEGVANYNGLRQQLTADMADSSQRVKAFVVRAEDARLLGDMPLMRKLYAELQTLNRKMIGEYAKRANNHQALLESLKEVKQAVQKASNLRVGQPKTRVVADCRTAIKANSADVLVQVICDG 1308
+V I +++LA + VQDL RFL V+ L+S A FP E ED++ + V++ N LR +LTADMAD S RVK V++AEDARLLG+MPLMR+ YAEL LNR+++ EY KRANNH+ALL +L++V Q +QKASNLRVG P+T+VV+DCR A+K N+ L++ I +G
Sbjct: 552 TDVVIFTMTIDLAAELVQDLTRFLGVEELKSNAVFPAECEDIKALLSQVSDLNSLRVKLTADMADVSSRVKTLVIKAEDARLLGNMPLMRRHYAELDGLNRELVAEYRKRANNHEALLSALRQVNQMIQKASNLRVGNPRTKVVSDCRQAVKTNNTLKLIKAIQEG 717
BLAST of mRNA_H-paniculata_contig2088.5437.1 vs. uniprot
Match: A0A7S2XUU1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XUU1_9STRA) HSP 1 Score: 162 bits (411), Expect = 2.510e-44 Identity = 82/138 (59.42%), Postives = 108/138 (78.26%), Query Frame = 1
Query: 913 FPREMEDLRRRMEGVANYNGLRQQLTADMADSSQRVKAFVVRAEDARLLGDMPLMRKLYAELQTLNRKMIGEYAKRANNHQALLESLKEVKQAVQKASNLRVGQPKTRVVADCRTAIKANSADVLVQVICDGFDPRGG 1326
FP EME + + V+++N +R +L ADMADSS RVKA V++AEDAR+LG+M LMR++YA+L TLNR+++ EY KRANNHQALL +LKEV +QKASNLR+G K+RVV++CR AIK N+ L Q+I +G DPRGG
Sbjct: 2 FPVEMESFKEVLRKVSDFNSIRLKLMADMADSSNRVKALVIQAEDARMLGNMTLMRRIYADLYTLNRQLVTEYVKRANNHQALLAALKEVNHMIQKASNLRMGSAKSRVVSECRNAIKVNNIQSLFQIIKEGRDPRGG 139
BLAST of mRNA_H-paniculata_contig2088.5437.1 vs. uniprot
Match: A0A7S0HC64_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0HC64_9EUKA) HSP 1 Score: 164 bits (415), Expect = 7.530e-44 Identity = 86/164 (52.44%), Postives = 116/164 (70.73%), Query Frame = 1
Query: 817 VRIRCDSMELAGDAVQDLCRFLQVDALESTAHFPREMEDLRRRMEGVANYNGLRQQLTADMADSSQRVKAFVVRAEDARLLGDMPLMRKLYAELQTLNRKMIGEYAKRANNHQALLESLKEVKQAVQKASNLRVGQPKTRVVADCRTAIKANSADVLVQVICDG 1308
+++ + MELAG+ +QDLC FLQ+ LES A FP EME R + V +YN R ++TA+MADSS K V++AEDAR+L D+ MR+ Y+EL + N ++GEY KRANNH+ LL +LKEV Q +QKA+ LRVG PK+RVV+ CR AIKAN+ L ++I G
Sbjct: 63 MQVLTEDMELAGEVLQDLCTFLQISELESVAEFPAEMETFRAVLLRVDDYNAARIKMTAEMADSSNLAKTLVIKAEDARILEDIKSMRRAYSELYSQNAGLLGEYNKRANNHEQLLAALKEVNQMIQKAARLRVGAPKSRVVSACRAAIKANNIHSLFKIIKTG 226
BLAST of mRNA_H-paniculata_contig2088.5437.1 vs. uniprot
Match: F0Y7H8_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y7H8_AURAN) HSP 1 Score: 174 bits (442), Expect = 1.140e-43 Identity = 92/174 (52.87%), Postives = 121/174 (69.54%), Query Frame = 1
Query: 787 QARQDSRRVEVRIRCDSMELAGDAVQDLCRFLQVDALESTAHFPREMEDLRRRMEGVANYNGLRQQLTADMADSSQRVKAFVVRAEDARLLGDMPLMRKLYAELQTLNRKMIGEYAKRANNHQALLESLKEVKQAVQKASNLRVGQPKTRVVADCRTAIKANSADVLVQVICDG 1308
+ARQ +V ++ + M A + VQDL F+ LES A FP EM L + VA +N +R +LTADMAD S R+KA V++AEDARL+ DMPLM++ YAEL LN ++I EY KRANNH+ALL +LK+V Q +QKASNLR G K+RVVA+ R AIK N+ D L Q++C+G
Sbjct: 529 EARQVGGQVNCKVSTNEMATAAEVVQDLAAFVDARELESVADFPAEMTALEDILSRVAKFNAIRIRLTADMADGSARIKALVLKAEDARLMADMPLMKRHYAELFALNNELIAEYNKRANNHEALLAALKDVNQIIQKASNLRAGAAKSRVVAEARAAIKTNAIDSLYQIVCEG 702
BLAST of mRNA_H-paniculata_contig2088.5437.1 vs. uniprot
Match: A0A7S1IWS5_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1IWS5_9EUGL) HSP 1 Score: 172 bits (436), Expect = 7.880e-43 Identity = 84/162 (51.85%), Postives = 122/162 (75.31%), Query Frame = 1
Query: 814 EVRIRCDSMELAGDAVQDLCRFLQVDALESTAHFPREMEDLRRRMEGVANYNGLRQQLTADMADSSQRVKAFVVRAEDARLLGDMPLMRKLYAELQTLNRKMIGEYAKRANNHQALLESLKEVKQAVQKASNLRVGQPKTRVVADCRTAIKANSADVLVQVI 1299
++ IR ++ME+AG+ +QDLC FL ++ LES A FP+E E+ ++ + V YN +R +LTA+MADSSQ VKA V++AEDAR+L DM LM+K+Y+ L +NR++IGEY KRANNH LL +LKEV +QKA+ LR+G KT+V+ +CR +IK+N+ L ++I
Sbjct: 549 QLTIRVNNMEVAGEIIQDLCSFLTINELESVADFPQEFEEFKKVLMKVDEYNAVRLKLTAEMADSSQLVKALVIKAEDARILNDMKLMKKMYSSLYDVNRELIGEYIKRANNHNELLSALKEVNAMIQKAARLRIGAAKTKVITECRNSIKSNNIHSLFKII 710
BLAST of mRNA_H-paniculata_contig2088.5437.1 vs. uniprot
Match: A0A7S1G4Y1_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G4Y1_9STRA) HSP 1 Score: 167 bits (424), Expect = 3.380e-41 Identity = 89/165 (53.94%), Postives = 116/165 (70.30%), Query Frame = 1
Query: 814 EVRIRCDSMELAGDAVQDLCRFLQVDALESTAHFPREMEDLRRRMEGVANYNGLRQQLTADMADSSQRVKAFVVRAEDARLLGDMPLMRKLYAELQTLNRKMIGEYAKRANNHQALLESLKEVKQAVQKASNLRVGQPKTRVVADCRTAIKANSADVLVQVICDG 1308
++ +R D MELA + VQ +C L V LES A FP EM + + V YN +R +LTA+MADSS VK V++AEDAR+LGDM LM+++Y+EL TLN ++IGEY KR++NHQ LL +LKEV +QKA+ LRVG K RVV+ CR AIKAN+ L Q+I DG
Sbjct: 550 KIVVRTDDMELAAEIVQAMCADLGVHELESRAEFPAEMTAFQEVLMRVDEYNAIRLKLTAEMADSSNMVKTLVIKAEDARILGDMKLMKRMYSELYTLNNELIGEYTKRSHNHQELLNALKEVNGMIQKAARLRVGTAKARVVSACRAAIKANNIHSLFQIISDG 714
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 252.7 |
| Seed ortholog evalue | 1.4e-64 |
| Seed eggNOG ortholog | 2880.D8LMB8 |
| Preferred name | BBS2 |
| KEGG ko | ko:K16747 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000003,GO:0000226,GO:0001085,GO:0001103,GO:0001501,GO:0001578,GO:0001894,GO:0001895,GO:0003006,GO:0003008,GO:0003012,GO:0003013,GO:0003018,GO:0003352,GO:0003356,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005815,GO:0005829,GO:0005856,GO:0005886,GO:0005902,GO:0005929,GO:0006810,GO:0006892,GO:0006893,GO:0006928,GO:0006936,GO:0006939,GO:0006996,GO:0007010,GO:0007017,GO:0007154,GO:0007165,GO:0007166,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007286,GO:0007288,GO:0007368,GO:0007369,GO:0007389,GO:0007399,GO:0007417,GO:0007420,GO:0007600,GO:0007601,GO:0007610,GO:0008015,GO:0008104,GO:0008134,GO:0008150,GO:0009605,GO:0009653,GO:0009719,GO:0009725,GO:0009790,GO:0009799,GO:0009855,GO:0009887,GO:0009888,GO:0009892,GO:0009987,GO:0009991,GO:0010033,GO:0010468,GO:0010605,GO:0010629,GO:0014820,GO:0014824,GO:0014829,GO:0015031,GO:0015630,GO:0015833,GO:0016020,GO:0016043,GO:0016192,GO:0019221,GO:0019222,GO:0019953,GO:0021537,GO:0021543,GO:0021544,GO:0021756,GO:0021761,GO:0021766,GO:0021987,GO:0022412,GO:0022414,GO:0022607,GO:0023052,GO:0030030,GO:0030031,GO:0030154,GO:0030317,GO:0030534,GO:0030900,GO:0031090,GO:0031253,GO:0031514,GO:0031667,GO:0032095,GO:0032096,GO:0032098,GO:0032099,GO:0032101,GO:0032102,GO:0032104,GO:0032105,GO:0032107,GO:0032108,GO:0032400,GO:0032401,GO:0032402,GO:0032420,GO:0032421,GO:0032501,GO:0032502,GO:0032504,GO:0032870,GO:0032879,GO:0032886,GO:0032991,GO:0033036,GO:0033059,GO:0033210,GO:0033365,GO:0034097,GO:0034464,GO:0034613,GO:0035082,GO:0035150,GO:0035296,GO:0036064,GO:0038108,GO:0040008,GO:0040011,GO:0040012,GO:0040014,GO:0040015,GO:0040018,GO:0042221,GO:0042310,GO:0042311,GO:0042592,GO:0042886,GO:0042995,GO:0043001,GO:0043005,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043232,GO:0043473,GO:0044085,GO:0044320,GO:0044321,GO:0044422,GO:0044424,GO:0044425,GO:0044430,GO:0044441,GO:0044444,GO:0044446,GO:0044459,GO:0044463,GO:0044464,GO:0044703,GO:0044782,GO:0045184,GO:0045444,GO:0045494,GO:0045926,GO:0045927,GO:0046907,GO:0048193,GO:0048232,GO:0048468,GO:0048513,GO:0048515,GO:0048518,GO:0048519,GO:0048583,GO:0048585,GO:0048598,GO:0048609,GO:0048638,GO:0048639,GO:0048640,GO:0048731,GO:0048854,GO:0048856,GO:0048869,GO:0048870,GO:0048871,GO:0050789,GO:0050793,GO:0050794,GO:0050877,GO:0050880,GO:0050896,GO:0050953,GO:0051093,GO:0051094,GO:0051179,GO:0051216,GO:0051234,GO:0051239,GO:0051240,GO:0051241,GO:0051270,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0051674,GO:0051704,GO:0051716,GO:0051875,GO:0051877,GO:0051904,GO:0051905,GO:0060170,GO:0060249,GO:0060255,GO:0060271,GO:0060295,GO:0060296,GO:0060322,GO:0060632,GO:0061448,GO:0061512,GO:0061951,GO:0065007,GO:0065008,GO:0070121,GO:0070491,GO:0070727,GO:0070887,GO:0070925,GO:0071310,GO:0071345,GO:0071495,GO:0071702,GO:0071705,GO:0071840,GO:0071944,GO:0072657,GO:0072659,GO:0090066,GO:0090150,GO:0097458,GO:0097722,GO:0097746,GO:0097755,GO:0097756,GO:0098588,GO:0098590,GO:0098858,GO:0098862,GO:0098876,GO:0120025,GO:0120031,GO:0120036,GO:0120038,GO:1902019,GO:1903441,GO:1905515,GO:1990778,GO:2000145 |
| EggNOG free text desc. | negative regulation of appetite by leptin-mediated signaling pathway |
| EggNOG OGs | 2C0K6@1,2QPWU@2759 |
| COG Functional cat. | S |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko03036 |
| Exons | 12 |
| Model size | 1560 |
| Cds size | 564 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2088.5437.1 >prot_H-paniculata_contig2088.5437.1 ID=prot_H-paniculata_contig2088.5437.1|Name=mRNA_H-paniculata_contig2088.5437.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=188bp
MELAGDAVQDLCRFLQVDALESTAHFPREMEDLRRRMEGVANYNGLRQQL
TADMADSSQRVKAFVVRAEDARLLGDMPLMRKLYAELQTLNRKMIGEYAK
RANNHQALLESLKEVKQAVQKASNLRVGQPKTRVVADCRTAIKANSADVL
VQVICDGFDPRGGDSVDNRVNNENGAIVLSPQRSPRK* back to topmRNA from alignment at H-paniculata_contig2088:299..10881+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig2088.5437.1 ID=mRNA_H-paniculata_contig2088.5437.1|Name=mRNA_H-paniculata_contig2088.5437.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=10583bp|location=Sequence derived from alignment at H-paniculata_contig2088:299..10881+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGGTGGTCTACAAGGACATGATGGCTGCACCTGTTGCGTCCATCTTATCC
GCTGACTACCGCATGGGCGGATGTGTAGAGCTGCTTGTGATCGGGGCAGA
CGGGGAGGTTAGAGGCTACGTTCCAACCGCACCGAGTCCTGCCTCCGGCG
AATCGCTAGCGAGCGGCACCAAAACACGGGTGAACTAACCAATCGGCATG
TTTTCATTGCAAGGAGCATGTGCGTATAGCGCGGCGTTTTTGCCCGGGGG
CTCAAAAAGCGACCGACGGGGAAGTGTTGTCGAGAAAAGCCAGTGGTAGT
GCTTGCAACAGTGATATCCATGCTGCTGTAACGTTTTGCTCGAGTGAATT
TCAGCACTTGACCGTAATTAGCGTATCGTAGTCCTGGAATGTTCCTAAAC
TTCAAGTATAAAGGTTAGCGCAAAGCAGATGTACCTGCTAGAATCATCTC
TCCCACGCCGTGCCGGATCTGTTGAGCATGGGTGAACCGCCCTTGATAGA
GTGAAAGACCATTCATTTAGATGATTGATTCATAACAGCTTTGCACAGAT
ATGTGACTCGAGCATACGTAACACGCCTACGCTAAACTTGTATGCACTTA
CCGTGTCGCAAATGCTAGTTGTTCAATTTGAGGAGTCGGCATTCAAATTT
CGCTGAAGTAGCTCATCGGAATTTGTTTTTCTAGAACCCGGCGTTGTCGG
CTCAGAAGTATGTATAATTGGGCGTTGAGCAGTTCTGTAATACGGCTTGC
TTTGAGAGTAATACCCACCGTTCCGGCCACATGTGGTTCATGATATTGAC
AATTTTTCCGACCACTTGTTAGCCGAACGGAAAGTAATGGACATGCGAAA
ACCATTTGGAACCCAATTAGAACAGAAACTCTTGCGCTCTCTCAGCGACG
AGGGACGAGCGGCGAGCTTGAGGATCTCCAACAAAGGAAAGCTTTGCTAG
CTTTAGAGCTGAGGAGCTTAGAAGATGCATCGAGAGCGAGTAAAAGTGGG
TTCAGGGGAGCCGGAGCCATCCCTGGAGACACTCAGGCGAGTGACCCTAA
TACAGAGTGGGAAAGCACGATTATCTACAAGGACTTACTGATCGATATGC
CTCTCAACCTTTGTTTCTTATTCAGCAAATCCCGAAATAAGGGTCCAACG
CGAGAAATACACGGGTGTGGTATCACCTTGAAGCTTTCAAAGACAGCCTA
CGGGTAAACGTCAACGGCGAAGTCCTCGTACTGCTATTAGATCTGCGCAC
CGTGTGCCGCAAGTATTAAATAAAGCAGGCATTACGACAGTGTCAAAATG
ACGAACCCTTGCCGTGGCCCTGGTTCAACACTAAACTGCAAGCGTTTGAT
GCGGTCGAGATTTTGCAACGGGCGTGCTGGCAATCATGGCGCTTGTAAAC
AGAACCTCAGCCGTGCAAACAAGGGTCATTATGTCCGCCTATGGCAAACT
CGCGTGTCTTGAACGGCAGGAGTCAAGCGTAGTACAGTCGCACAAGAGTG
TTGTTGCCCACCGTGTGCCATAACAAGAACATGACCAAGTGCTCAAACGC
CGTATGTCTAAATAAGTAAAATTAATATCGTCTGATGAGCAGTATTTGAC
GGATAAGAACTGCAGGCTAAACTTCAAGTATTGTCTAATCGGGTCTTATA
GTTCACCTAGTCCGATGTTTATGACTCGCCTAGTTTTGATGACGTTTACC
ACCCGGGGGGCGGATGCAGCTAGACCACGTATATCGGAAAAAGCGTGTAT
CAGACAACACACGTCTCTCAGCGGACAACGGGCGATTCTAGGTGCCGACA
TCGTTGTTCGCAGCACGTCTTGAAGATTCAAAAAGACATCATCTTCCTGA
CTATAAGACGAGGACGACGCAATCCACAGAACGAAAACCCTTGATCAATC
AACATTGTACAGCATATATCCTCCCAGCGCCAATGTGTCCTGTTATAAGA
GCACCTTCGGTCACAGAGAATCAACCGTTGCTCACCGACAGAATTACTCT
GCGTGCTACTACCGTAGCGATTGCGGACGGATCTGGTCATACTGTAGCGA
TCCCGTAACGAGTCTCTCGCAATGACGTCTGAACCTCGGCAAGACCCTTC
ATATGCGTCAACGTCCCATTCTGTATCTTTCGCGAAATAATGCAGGTCGT
GGCCACGCTTCACTCCGGAGAGAGAGCCGAACCCTTGCAGCTCGTCGTTT
CGACAAACAACGACGCGCTTATCGCTAGCGTAGTCGCGGTGGATCCTGAC
GGGGGGTTATTTGGTGGAAAGGTAAAGGAGGAACGTGCATGAAAACAGCA
TGTAGAGCGGATGCGAAGCCGTTACTGCAAGCAAATGACAAGCGGTGTCA
ACAGCCACCCAGTCCATGTTACTGCTCTATATGCAGATGTACAGTACTTC
CTTGGCACTACATGTAGATTTATCTAACCTGGAACATATTAACGGCATCT
ACTAGAGAAAAAAACGAAATAACCGAGGGGGGTTCGCCACTCCGAATCTC
CTCACTACTGACTTCTCCACAGCCATGTGCTCTTAAGATACTATATACTG
TACACTTGCGCCCCGAACGGCTTGGAGCGAAATCAATGGTTGAACCTAGC
GGCATACATGCCCGCGCGCGTTCTTCTTGATCCGGCTTGCCTGTTCCTTC
AGACCTTGGTATCCAATCCACAGGTTCCTAGCTCCAACGTTTCTTTGTGT
CTAAGCACAGAAAGGCCGTCTGTCAAGACCCAAGCGGCGACGATACATTT
GCAGGTACGCACTTGCGCAGAATGGGCACTTGTGTTTGCGCTTGTTCATA
CCTGTGGATAACGCGGGTAAGAGGCGAAAGGCTATGTCGATAGAAGTTGC
GGACTTTGAATACAGAAAAACAGCATTCAGACGCACAAGATAAGATCCTG
GGACTTCGAAATTCACAGACCAGTGGTAAAACTGGAGATTTTCGACTTTC
GCCGGAACGAGCGCGATGGAACCGCGTGTGTTTGCCGTCGCGTTTCTCCT
AGAACTACAACTATATGCAAGCAAGTCCGTGCGAGGAAAGACAATAGTAA
TGCCAGTTATTCGTTCCATCATCGTATTAGTGAACCCCAAGTCTGAGAAT
ATAGCCCGTCGTTTTGCACATGGGTCACACCGATACGTTGAGTCTCGATG
GTAGAAAGCATGCCAAGGGAGTGAGTGACTCATTGAGTTTCCATCTCACG
TCCCCCATTAGGTACACGTCGGAACTCGAGGCTACCCGAACACCCTGTAT
GCCTTCGATTTGAAGCAGGAATTGCCCAAGTTCGCCGCGTTCTCTCAGGT
GAGAAATAATGAGTGAGGAAACAAATAAACCATTCCCATGCCTAAATACC
GTCACGAACTTGTCGAATCGTTGCGATCATGGGGACGTGAAAATCTGCTT
CAATCAGATACGCAGTGTTTTCCACCTAAACATGAGCAAGAACCATGTTC
TCGTCGAAATTTCTCGGCTTCCCGGAGTGGCAGTAATGTAGCCGGAAGAC
AAGCCGGGTCGACAACCACGAGTAAGCATGATCATTACCACAAAGAAGCG
TCCAGTCCGGTTTTTATTAAAACGAGTGTGCACGGACGATGTCATCGTTT
CGTCACGTCCGTAGCTTGCACGCAACTCCGCGTTTGCGGTATACACGACC
GCTTGTCACAGGCTTGGCCGTGTTTCACCCGCTGAAGACATGTACACATC
GCCTCGTGCCTTCTGTGGTCATTTGGTCGGCGATCACTGTACCTGCCTCT
TTGGGAACGCTGGGACTATTAGTGTTGTCGACGGTGCATCGTGTGAAAAG
CTCTGACTGCTATCCACGGTGAGGAGGTCACCTAGAAATCTTGTTGCACC
ACGATACCCGGATGTGTTCGCAGGATCCCGATCCAGCGACTGCGTCGAAG
CCGGACTCGTGCGTCACATTCTCCCTGTCAGACCAGCTCTCGCGTGTAGC
GCAGTGGATTGAACGGAGTTTCGTTTGCCAGCGCGAGGTTCCGGGGGACA
GGTAATATCAACAAGCCTTAAGCACGCAATTGTCTTGATGTCCCTCGGAT
ATAGAAAACTCTATCTGAATATGTATGTGCTAACACCCAGAATAGCAGTG
AATGACTTTTCTATGGTCCGTAAACGCGGGCAAATACGTACACACGCGTC
CGCGTTTCGAACACGGAGAGGCCCAGACATGTTTCGCAACGCATTTGCAA
ATCACAACACAGGGAAGTAAAGGAGGCATTTTGGATACCGAGGGAATCGG
AGGAAGACCACGAGTCGGGGACGCTGTGGTTCCAGGTGACATAAAAGTTG
CGACACCACAGCTGTGGAAAACTGATATATTTTCCTCCCTCCACCCAAAC
GTGTAGCACCTATTCGCGTTAACAACAACAGGTGTTCTTGCTCCGCTCGA
GCTGACGTCTCAACTTCCATGGTTCAAGGTCCACCTTAACCGCGAGTATC
GAATGGTGTGAAACACTCCTTGCTACCATACCAAAGTCGTAATTTTGGTC
ACCCTTCGGTGGCGTGAGAACCTGACAACGAGAGACCATATTGAGGGTCG
TATTGAATACATCTTCAGGAGCACTACGTAAATACCCTACAGCACCCCCC
CTTCGCTAGAGCAGTGTTGCTTTCCGCGTAGAAGAAGTAGGGCTAGGACT
ACATTTCTATCCAGGCAAACACTGCATTAATGCCCTGTTTTGGAGGTAAC
GCCACCGAGCGCAAATATCCTGAAATAATTCAAATTTTATTACCCATCGT
TGTTGAATAAACTAAGATATCTTCCCCGACCCCTGACCCCTAAGCTGGTC
CGTTTATTGAATTAGCAGTATTAAAAAGACTCAGCATACCTCTAATTGTG
ATTGCAGTGATGTATTTCCCTTTGTACTACACATGTTTCACACACCACTC
TCATGCTGTCGATGTTATCCTGTTCGGTGAGATACCCTTATCGAGCGGCG
CACGTGTTGTTCTCGCTGCCATAGTATAGTTTACGTGTAAAGTCCCTGGC
CCTGCTTGAAGTGCGCTACTCGTTCTCTTGTACGCTGCTGCATATTGATA
TCATGTTGTAAATTTCAGCTCTCCAAAATGCACACCAATCGAACGCAGTG
TAGTACCCCCTATCCCTCTTTCCGCTCGTCACTTCATCCATTTTGACTGG
TCCATCGACTATAACCACCGTTTGGTTGATCTGCACAGGCGAGACAAGAT
AGTCGGCGCGTAGAAGTGCGCATTCGATGCGACAGCATGGAACTAGCGGG
AGACGCGGTTCAAGATCTCTGTCGGTTTCTTCAGGTAAATAGAACATTAC
CGGCGAAGAGTTTTTTCCCACGAAAAATTGTCGAACGATGAAACTGCGCA
AGGGTTGGCAGTTGGCGTTCACCATGGATTGTGTACTCCCTCCAGCCAGA
ATGTATGTGCCGATAAGCACGTAACTCTTCACGATGACCTCCAATTTCAA
AACGGTTTTTGCGTTGGATTCCTTGACGTTCGTTTCATCAGAGCACTTTT
TTCCCTTTCATTCAACCCCATACACCCACCAATCCAGCACCTTCTTGAAG
GCCTCTTGGTCCACTGGGACCGATCTGGGGAAATGACCCGCCCGCTGGCG
CTTTCTGATATTCATGTGCTCGACCTCGAAATCGTTCCCCCCCAGCCCTT
CAAGCACCTGGTTGTACCCCTGAAGATACTCTGCGACACCCTTTCCAGAG
TGCCTGCATCGTACTTGGCGAACAGCTTCTGAACCCCCTGAAAAATGTCG
TCGATTGTGCCAAAACCCTCCCGCCAAACTCTGCTTTTCAAGGATGCAAA
GAACTCCAGATCATTGATGTTGAGGTCCGGCGACTGCGCTGGTTGCGTCA
CGAGCTGAATGTCCCATCTCCCCCTCCTTCCCTACTATGTTCAGCTTCTC
CGGTATGCCCTTGCCCGTGTGAAGGCTCGCGCCATCTTGCTGCACGACCC
CCCGATTCAAGTCAGGGCATTTTTTCCTTGATCGCGGGCAGAAGCTTATG
CTCATACCACTCTTGGTAGTACTCGGAGTGAATGGTGACGTCGACCGAGT
ACTCCTCACCGCTCTCGTGCCGTTCCGTAGTCCTCTGCGCCTCCTTCATG
ACGCAAACTCGCCAAATCCCGACTTCGCCATCAATTTCACGGGAAGGATC
CAGGCGCGACACGACGCAGATGGCCATCACCTTGGGAATTTGACTCTTGT
GCTGCATTTTATGGAGCCCACGTTCTCCTCTCCCGAAAACATCCGCACCT
TGTCCAGTCGTCCCTTCACGTTTACCTATACGTACTAGGGACACCCTTCT
CCCACTCCAAACTCTGCCGCAAGTTTAGGCCCAACGCCCGTCGGGAGTCT
CTCTTTGTCGGGAAGGAGAACCCACGCGTACCGCAGAGCAAGTGCCGTCC
GACCTTCCTCGGGGAGTTCACAATTCTTTCCCCGATTCGTCGGACTCTGA
GGGCTCGCCATGAGGGTGATATGCGCGCCGCGAGCGAGGTGGTTCAAGGT
GCCCGCTTGCTGTCGATGCTCTGGGAGTGGTGTGCGGCCTTTACGGTGCA
CGGCGTCCAGTCAAAAGGATCCGAGCATGCCCACTTTTGTATTCTAGGTT
TTCGGAACAGAATCGGAATAATAGTATTTTGCAAATATCCCATCTGTATC
AAAAAAACGCCAAGGAATCCAATGCAAAAACCGTTTCGAAATCGGAGGTC
ATGCCGAAGAATTTCATGCCTATCGGCACAGACTTTCTGGCAAGAGGGAA
TATCCCCACAGCATGCGTGGGTTGGGCCGCCCTTCGTTGTCATTCACTTG
ATAGATGGAACTTGGAGAGGTGAGCAGTAGCACGACCCGGGGGTAGAGGG
TATACTATCCACGTCCTTTTTTCTGAAAGAGGACTAACGCAAATTACCGT
ACTTGCCCTCTACTGTTCGACACCATTCGTAGTGTATATTGTGCCTTGGT
GAACCTTACACCGACCACATATACCATGTCTCGCGACGACGTTTAGCTAG
GAGAGGGCGGGTATAGTAGCTACGCGCAGGCGTACTTAGTCAAGGTGTCT
TCCGATAGGATAGATGCTACCACTAGCTCATCTTTGCATTGTCTCGATCA
CAAGAAGCGAAACGGGAACGAGGACATCAACGTCAGCTCGGCATAATACC
AACCACAACGGGACCTTGCGTACACACGAAACATATTCGATGGCGGTGGA
AGTACCATTTATCTGCGCGCACCGCTGCAACTCAGGTTGATGCTTTGGAG
TCGACGGCTCACTTTCCAAGGGAGATGGAAGACCTGCGACGCAGGATGGA
AGGTGTTGCCAACTATAACGGCTTACGACAGCAGCTCACTGCCGACATGG
CAGATAGCTCGCAGAGGTGAACAGCGCGCACTACCGTAGTCAGTGACCGC
GATGCACCTTGTACGTTGCCTGGAATGCAGTTTGCGTACTCAGAAAATCA
GTAAGTATGAAGTGTGTGGTTTTAGTGTCTCAAAAATACAGCGAGAGAGG
ATTACCGTCCATCGAGCACTCGTAGGAGGGCATGAAACGGGTTGACACAA
CCCCCGAAAACTTAGACGTTGCGAGTGGAGCAGAGAGCCAGAGCAGGGCA
TTGCTTTCCGGATGCCACTACCGTCCTTCTTTTCGTTGTATTTGCTATAG
CCATACCGACAGACGACTCGTTGCAATTTTCTGGTGCACAGTTGCCTTGA
CCCGTGGTTACTCCTACGCTCCACCCGATTGGTTACGCAGGGTGAAGGCG
TTTGTGGTTCGGGCTGAGGACGCCAGGCTGTTGGGCGATATGCCCCTAAT
GCGCAAGCTATATGCCGAGCTACAAACGCTAAATCGGAAGATGATCGGGG
AATATGCAAAACGAGCCAACAACCATCAGGTCGGTATGGACACACGATTG
CATCATATATTACACACGAGTCGTTTCATCTAATGCAGAGCACCGTCCTT
GTGTAGGGTAGCATACAGTGAATAACGCCGGGAAGATCGTGTCAAACCCG
ATTTCGTTTTTACCCAGTGTGCTGCTGTTTACGCTGGTAGCTACGTTCTT
AAAAAAATCGACACGGATATGTGGCAAACGGGCTCTTTCTACGAATCACG
TTCAACATCCTCGAGAAAACCGAATTCGTACAATCATGATAGACAGTAGA
CGTCACCGTTAGTGTTATATATATATTGTAAGTTACGGTATGCAAGGATA
TCGCGGGTGAGCAGCTGGTTTCGTTTGTCCTTTGTCAGAAAAAAGTGCAC
ATATATCCTTCGCTGAAGATGGTTGCCCATGCTTCTCACAACGTCAAGGT
TCGAATACACGGTGGACCCGTGGTACGGTACACCTGATATTTATTGGGTC
GACAGAATTGTAGTTCATTATGAGGCTTGGATGCGCCTCCTGGTTTACGA
TCACGGGATACGTTACTGGTGTGCCAGTTACTCTCAATCTTTTACCCATG
GTTCAACGGACTAATTGACGAGTTTATCTGTTGCATAAAGCTGCTCGGAA
CGATAACAGTCATGGCATGCCCCCATACGATGATCGAAAAAACTCTTAAT
AAGGGTTCTAAACGTTGGTGCTTTTTTTCCCGTTTTCCCCTTTTGTTTCT
CTTTTCCTTTTTTTTTTTCTTGTTCTCCTCGATTTGTTTTTTCAAAAACG
AGATAACATTTTTGCGTGGAGTGTTCCTCAATCCTATTTAAAGTTGTTCC
CATGAGTCCGACATAATATCAGCGTATTTTCTGGAGAGGGATAAAAAATA
ATAAAGGAAAAATAGCAAAGGGGGAGGGGGGGATACAAGCAATTGAACGG
TCCTTAGCGTTAAACTCCATGCTAACTCCCCGGGCGCCATCTCTCGCCTC
CCATGATTTATTGGGCTCCCGGACACCGCCTGATTCCCGCATGTTCTATT
GACCCAATTGATGTATCAACCTCAGGCGCTGCTGGAATCTTTGAAGGAAG
TCAAGCAAGCTGTGCAGAAGGTGGGTTGCTCACGCGGTCGTCCTCAAGCT
GCAGAATTCGAACAATAACTTGTTCCGCGTATTTTATAATGAATAACATG
ATGTCTACAACAACAAAAGCAAGATTGGGGCGAGACACATAGTCTGCTTG
GCACGGTAATCGACCTGGGGGATCATGCCGTGCAAGGCAACCCCGAAGCC
AAACTTGTGGATGATGCGTTTCTGCGATACAGGCGCATTATTTTCTCTAC
CGAACACGCCTTCCATAACTTACGCAACCCACGATGACGCCTGCGCCTGC
AAGTGAATGGCTCGACATGTGTGCTGTAGATAAAGCTAACAGATGACAAT
GCGCTTACACGAATGAAAAGCACCGTCCTCAGCGGTGATGACGACGGTCA
ACACTAAGTAAAAGTTACCCCTGCTTCCTTCCCGCTTGCAGGCGTCTAAT
TTGCGTGTGGGACAGCCGAAAACGAGGGTGGTAGCCGATTGTCGCACAGC
AATCAAGGTAGGTGTACTTAACAAGGTGAAAGTGGACGAGATGTGCATGC
ATTCACAGCACTCATACACAACAGCGCGTCAGATGTATGAAGCAGCCCAT
GTAGATGGATAGTGCGCGTGTCCTACGAACCCAACAGGATGGTCTCATAC
ATCTATCTATATATATATATATATATATATATGTTCTAGAAGTAGACCCA
TGGCTACGCCTGTGCAGTTCACGCATGTCCTCGACGTACGGAGTTGCTGC
ACTTGCAACGGCTCACTACGTTCGTATGAAGACTCATGTTTCAGGGTTTA
CTCAAGTGCAGACCTCAGAAAATGTTCCAAATGAAGAAAATGAAGACCAC
CTTACCATATGAAGAACAGACATTAACAGGTGGTGTTCATGTTATGTATC
TAAAAAAGGATTAGCAAACCCTCTTTGGTCTATATCAAGTGAAATATGTT
CATTAAAATATTGGGCAAAGGAAATGGTATGGTATTTCGCCTGACTTGGG
CATCTTGTGGTCCTTATCCCTGGTTGAAAAAATTCCCTGCTTGATTTCAC
ATATACATACGATGAGTCTTGTAGTAAGGATCTCAAAAGAGTTGAGAGCT
AGACGTTATATGAACCAGCAATTTATACATCATACATTCGGAGTTTAAGA
ACCTCCGACTAAACGACTGCGAAATGTTACTGTAAAACGTTGTTGTGATT
TAGTACGTACCATCGCACGTGAACGAAAATGTGGATCTACATACGTACTG
TATATCGTCCATGGTGCGTATCCACATGACATATGTGGTTCCAGTGAACT
GCAATTGCTATGCACATGATGTTGCGTTTTGTGCTACAGGCTAACAGCGC
GGATGTTTTGGTGCAAGTCATATGCGATGGGTTCGATCCACGAGGAGGTG
ACAGCGTGGACAACCGGGTCAACAACGAAAACGGCGCTATTGTCTTGAGC
CCTCAGCGATCTCCCCGAAAATAGCCATTATAAGCGGGGAGTGCTGTGAG
CGCTGTTTGTCGTCGAAATTTGTGGCCGCAAGTGTTGCTGACAAGGTCGT
AGAAACTGTCTGGCCTACCTGTAGTTTGCGGGGGTATGTAGGATATCTGA
TATTTCGTCGCGCGGATGTTTCCTTTTACATGC back to topCoding sequence (CDS) from alignment at H-paniculata_contig2088:299..10881+ >mRNA_H-paniculata_contig2088.5437.1 ID=mRNA_H-paniculata_contig2088.5437.1|Name=mRNA_H-paniculata_contig2088.5437.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1128bp|location=Sequence derived from alignment at H-paniculata_contig2088:299..10881+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGAACTAGCGGGAGACGCGGTTCAAGATCTCTGTCGGTTTCTTCAGAT
GGAACTAGCGGGAGACGCGGTTCAAGATCTCTGTCGGTTTCTTCAGGTTG
ATGCTTTGGAGTCGACGGCTCACTTTCCAAGGGAGATGGAAGACCTGCGA
CGCAGGATGGAAGGTGTTGCCAACTATAACGGCTTACGACAGCAGCTCAC
TGCCGACATGGCAGATAGCTCGCAGAGGTTGATGCTTTGGAGTCGACGGC
TCACTTTCCAAGGGAGATGGAAGACCTGCGACGCAGGATGGAAGGTGTTG
CCAACTATAACGGCTTACGACAGCAGCTCACTGCCGACATGGCAGATAGC
TCGCAGAGGGTGAAGGCGTTTGTGGTTCGGGCTGAGGACGCCAGGCTGTT
GGGCGATATGCCCCTAATGCGCAAGCTATATGCCGAGCTACAAACGCTAA
ATCGGAAGATGATCGGGGAATATGCAAAACGAGCCAACAACCATCAGGGT
GAAGGCGTTTGTGGTTCGGGCTGAGGACGCCAGGCTGTTGGGCGATATGC
CCCTAATGCGCAAGCTATATGCCGAGCTACAAACGCTAAATCGGAAGATG
ATCGGGGAATATGCAAAACGAGCCAACAACCATCAGGCGCTGCTGGAATC
TTTGAAGGAAGTCAAGCAAGCTGTGCAGAAGGCGCTGCTGGAATCTTTGA
AGGAAGTCAAGCAAGCTGTGCAGAAGGCGTCTAATTTGCGTGTGGGACAG
CCGAAAACGAGGGTGGTAGCCGATTGTCGCACAGCAATCAAGGCGTCTAA
TTTGCGTGTGGGACAGCCGAAAACGAGGGTGGTAGCCGATTGTCGCACAG
CAATCAAGGCTAACAGCGCGGATGTTTTGGTGCAAGTCATATGCGATGGG
TTCGATCCACGAGGAGGTGACAGCGTGGACAACCGGGTCAACAACGAAAA
CGGCGCTATTGTCTTGAGCCCTCAGCGATCTCCCCGAAAATAGGCTAACA
GCGCGGATGTTTTGGTGCAAGTCATATGCGATGGGTTCGATCCACGAGGA
GGTGACAGCGTGGACAACCGGGTCAACAACGAAAACGGCGCTATTGTCTT
GAGCCCTCAGCGATCTCCCCGAAAATAG back to top
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