prot_H-paniculata_contig2088.5437.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2088.5437.1
Unique Nameprot_H-paniculata_contig2088.5437.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length188
Homology
BLAST of mRNA_H-paniculata_contig2088.5437.1 vs. uniprot
Match: D8LMB8_ECTSI (Bardet-Biedl syndrome 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMB8_ECTSI)

HSP 1 Score: 247 bits (631), Expect = 7.410e-75
Identity = 132/181 (72.93%), Postives = 148/181 (81.77%), Query Frame = 0
Query:    1 MELAGDAVQDLCRFLQVDALESTAHFPREMEDLRRRMEGVANYNGLRQQLTADMADSSQRVKAFVVRAEDARLLGDMPLMRKLYAELQTLNRKMIGEYAKRANNHQALLESLKEVKQAVQKASNLRVGQPKTRVVADCRTAIKANSADVLVQVICDGFDPRGGDSVDNRVNNENGAIVLSP 181
            MELAG+ VQDL RFL+V  LESTAHFP EME LR  MEGV +YN LRQQLTADMADSSQRVKA+VVRAEDARLLGDMPL+RK+YAEL  LNR+++GEYAKRANNH ALL +LKEVKQ VQKASNLR+GQ KTRVV+DCR AIKAN+AD LVQVI DG DP G   V +  + + G   L P
Sbjct:  536 MELAGEVVQDLGRFLEVTELESTAHFPDEMEVLRDVMEGVVDYNSLRQQLTADMADSSQRVKAYVVRAEDARLLGDMPLVRKMYAELNNLNRRLVGEYAKRANNHHALLAALKEVKQTVQKASNLRIGQAKTRVVSDCRAAIKANNADGLVQVISDGLDPLGAGIVPSTTDGQGGQSRLVP 716          
BLAST of mRNA_H-paniculata_contig2088.5437.1 vs. uniprot
Match: A0A7S3XR61_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XR61_HETAK)

HSP 1 Score: 188 bits (478), Expect = 6.430e-57
Identity = 96/165 (58.18%), Postives = 126/165 (76.36%), Query Frame = 0
Query:    1 MELAGDAVQDLCRFLQVDALESTAHFPREMEDLRRRMEGVANYNGLRQQLTADMADSSQRVKAFVVRAEDARLLGDMPLMRKLYAELQTLNRKMIGEYAKRANNHQALLESLKEVKQAVQKASNLRVGQPKTRVVADCRTAIKANSADVLVQVICDGFDPRGGDS 165
            MELA +  QDLC+ L+V  LES A FP EME+ +  +  V+++N +R +L ADMAD+S RVK  V++AEDAR+LGDM LMR++YA+L TLNR+++ EY KRANNHQALL SLKEV   +QKASNLR+G  K+RVV++CR AIK N+   L Q+I +G DPRG +S
Sbjct:   66 MELASEVAQDLCKGLKVRELESAADFPDEMEEFKEVLRKVSDHNAVRLRLMADMADASNRVKGLVIQAEDARILGDMALMRRIYADLYTLNRQLVTEYVKRANNHQALLNSLKEVNHMIQKASNLRMGSAKSRVVSECRNAIKVNNIKSLFQIIKEGHDPRGANS 230          
BLAST of mRNA_H-paniculata_contig2088.5437.1 vs. uniprot
Match: A0A7S2S5V3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S5V3_9STRA)

HSP 1 Score: 176 bits (446), Expect = 3.350e-48
Identity = 90/157 (57.32%), Postives = 121/157 (77.07%), Query Frame = 0
Query:    1 MELAGDAVQDLCRFLQVDALESTAHFPREMEDLRRRMEGVANYNGLRQQLTADMADSSQRVKAFVVRAEDARLLGDMPLMRKLYAELQTLNRKMIGEYAKRANNHQALLESLKEVKQAVQKASNLRVGQPKTRVVADCRTAIKANSADVLVQVICDG 157
            ++LA + VQDL RFL V+ L+S A FP E ED++  +  V++ N LR +LTADMAD S RVK  V++AEDARLLG+MPLMR+ YAEL  LNR+++ EY KRANNH+ALL +L++V Q +QKASNLRVG P+T+VV+DCR A+K N+   L++ I +G
Sbjct:  561 IDLAAELVQDLTRFLGVEELKSNAVFPAECEDIKALLSQVSDLNSLRVKLTADMADVSSRVKTLVIKAEDARLLGNMPLMRRHYAELDGLNRELVAEYRKRANNHEALLSALRQVNQMIQKASNLRVGNPRTKVVSDCRQAVKTNNTLKLIKAIQEG 717          
BLAST of mRNA_H-paniculata_contig2088.5437.1 vs. uniprot
Match: A0A7S2XUU1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XUU1_9STRA)

HSP 1 Score: 162 bits (411), Expect = 3.900e-48
Identity = 82/138 (59.42%), Postives = 108/138 (78.26%), Query Frame = 0
Query:   26 FPREMEDLRRRMEGVANYNGLRQQLTADMADSSQRVKAFVVRAEDARLLGDMPLMRKLYAELQTLNRKMIGEYAKRANNHQALLESLKEVKQAVQKASNLRVGQPKTRVVADCRTAIKANSADVLVQVICDGFDPRGG 163
            FP EME  +  +  V+++N +R +L ADMADSS RVKA V++AEDAR+LG+M LMR++YA+L TLNR+++ EY KRANNHQALL +LKEV   +QKASNLR+G  K+RVV++CR AIK N+   L Q+I +G DPRGG
Sbjct:    2 FPVEMESFKEVLRKVSDFNSIRLKLMADMADSSNRVKALVIQAEDARMLGNMTLMRRIYADLYTLNRQLVTEYVKRANNHQALLAALKEVNHMIQKASNLRMGSAKSRVVSECRNAIKVNNIQSLFQIIKEGRDPRGG 139          
BLAST of mRNA_H-paniculata_contig2088.5437.1 vs. uniprot
Match: A0A7S2N0E0_9DINO (Hypothetical protein n=1 Tax=Alexandrium andersonii TaxID=327968 RepID=A0A7S2N0E0_9DINO)

HSP 1 Score: 166 bits (421), Expect = 4.390e-47
Identity = 91/163 (55.83%), Postives = 115/163 (70.55%), Query Frame = 0
Query:    1 MELAGDAVQDLCRFLQVDALESTAHFPREMEDLRRRMEGVANYNGLRQQLTADMADSSQRVKAFVVRAEDARLLGDMPLMRKLYAELQTLNRKMIGEYAKRANNHQALLESLKEVKQAVQKASNLRVGQPKTRVVADCRTAIKANSADVLVQVICDGFDPRGG 163
            +E+AG+ VQDLC FLQV   ESTA+FP EME  +  +  V  YN +R +LTA+MADS+  VKA +V+AED R+L DM  ++K++A LQ  N ++I EY+KRANNHQ LL  LKEV   +QKA+ LRVG PKTRVVA CR AIK N+   L Q+I  G D  GG
Sbjct:  196 IEVAGEMVQDLCGFLQVAEQESTANFPDEMEKFKAVLMKVDEYNAVRLKLTAEMADSANLVKALIVKAEDYRMLSDMGNLKKVFAGLQNTNGELIAEYSKRANNHQQLLGQLKEVNMMIQKAAKLRVGSPKTRVVAACRQAIKKNNIHELFQIIRTGQDTSGG 358          
BLAST of mRNA_H-paniculata_contig2088.5437.1 vs. uniprot
Match: A0A7S0HC64_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0HC64_9EUKA)

HSP 1 Score: 162 bits (411), Expect = 4.430e-47
Identity = 86/157 (54.78%), Postives = 112/157 (71.34%), Query Frame = 0
Query:    1 MELAGDAVQDLCRFLQVDALESTAHFPREMEDLRRRMEGVANYNGLRQQLTADMADSSQRVKAFVVRAEDARLLGDMPLMRKLYAELQTLNRKMIGEYAKRANNHQALLESLKEVKQAVQKASNLRVGQPKTRVVADCRTAIKANSADVLVQVICDG 157
            MELAG+ +QDLC FLQ+  LES A FP EME  R  +  V +YN  R ++TA+MADSS   K  V++AEDAR+L D+  MR+ Y+EL + N  ++GEY KRANNH+ LL +LKEV Q +QKA+ LRVG PK+RVV+ CR AIKAN+   L ++I  G
Sbjct:   70 MELAGEVLQDLCTFLQISELESVAEFPAEMETFRAVLLRVDDYNAARIKMTAEMADSSNLAKTLVIKAEDARILEDIKSMRRAYSELYSQNAGLLGEYNKRANNHEQLLAALKEVNQMIQKAARLRVGAPKSRVVSACRAAIKANNIHSLFKIIKTG 226          
BLAST of mRNA_H-paniculata_contig2088.5437.1 vs. uniprot
Match: A0A812SRY6_SYMPI (Bbs2 protein n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812SRY6_SYMPI)

HSP 1 Score: 159 bits (403), Expect = 1.560e-46
Identity = 87/162 (53.70%), Postives = 111/162 (68.52%), Query Frame = 0
Query:    1 MELAGDAVQDLCRFLQVDALESTAHFPREMEDLRRRMEGVANYNGLRQQLTADMADSSQRVKAFVVRAEDARLLGDMPLMRKLYAELQTLNRKMIGEYAKRANNHQALLESLKEVKQAVQKASNLRVGQPKTRVVADCRTAIKANSADVLVQVICDGFDPRG 162
            ME AG+ VQDLC FLQV  LES+A+FP EME  ++ +  V  YN +R +LTA+MADS+  VKA +V+AED R+L DM  ++K+++ LQ  N  +I EY KRANNHQ LL  LKEV   +QKA+ LR+G  K RVVA CR AIK N+   L Q+I  G D  G
Sbjct:   16 METAGEMVQDLCSFLQVSELESSANFPSEMEKFQQVLTRVDEYNAVRMKLTAEMADSANLVKALIVKAEDYRMLSDMQHLKKVFSGLQQTNSDLIAEYNKRANNHQQLLSQLKEVNMMIQKAAKLRMGNAKGRVVAACRQAIKQNNIMGLFQIIRTGHDASG 177          
BLAST of mRNA_H-paniculata_contig2088.5437.1 vs. uniprot
Match: F0Y7H8_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y7H8_AURAN)

HSP 1 Score: 167 bits (424), Expect = 3.860e-45
Identity = 88/157 (56.05%), Postives = 112/157 (71.34%), Query Frame = 0
Query:    1 MELAGDAVQDLCRFLQVDALESTAHFPREMEDLRRRMEGVANYNGLRQQLTADMADSSQRVKAFVVRAEDARLLGDMPLMRKLYAELQTLNRKMIGEYAKRANNHQALLESLKEVKQAVQKASNLRVGQPKTRVVADCRTAIKANSADVLVQVICDG 157
            M  A + VQDL  F+    LES A FP EM  L   +  VA +N +R +LTADMAD S R+KA V++AEDARL+ DMPLM++ YAEL  LN ++I EY KRANNH+ALL +LK+V Q +QKASNLR G  K+RVVA+ R AIK N+ D L Q++C+G
Sbjct:  546 MATAAEVVQDLAAFVDARELESVADFPAEMTALEDILSRVAKFNAIRIRLTADMADGSARIKALVLKAEDARLMADMPLMKRHYAELFALNNELIAEYNKRANNHEALLAALKDVNQIIQKASNLRAGAAKSRVVAEARAAIKTNAIDSLYQIVCEG 702          
BLAST of mRNA_H-paniculata_contig2088.5437.1 vs. uniprot
Match: A0A7S1IWS5_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1IWS5_9EUGL)

HSP 1 Score: 167 bits (424), Expect = 4.040e-45
Identity = 82/154 (53.25%), Postives = 116/154 (75.32%), Query Frame = 0
Query:    1 MELAGDAVQDLCRFLQVDALESTAHFPREMEDLRRRMEGVANYNGLRQQLTADMADSSQRVKAFVVRAEDARLLGDMPLMRKLYAELQTLNRKMIGEYAKRANNHQALLESLKEVKQAVQKASNLRVGQPKTRVVADCRTAIKANSADVLVQVI 154
            ME+AG+ +QDLC FL ++ LES A FP+E E+ ++ +  V  YN +R +LTA+MADSSQ VKA V++AEDAR+L DM LM+K+Y+ L  +NR++IGEY KRANNH  LL +LKEV   +QKA+ LR+G  KT+V+ +CR +IK+N+   L ++I
Sbjct:  557 MEVAGEIIQDLCSFLTINELESVADFPQEFEEFKKVLMKVDEYNAVRLKLTAEMADSSQLVKALVIKAEDARILNDMKLMKKMYSSLYDVNRELIGEYIKRANNHNELLSALKEVNAMIQKAARLRIGAAKTKVITECRNSIKSNNIHSLFKII 710          
BLAST of mRNA_H-paniculata_contig2088.5437.1 vs. uniprot
Match: A0A7S1EYS9_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1EYS9_NOCSC)

HSP 1 Score: 160 bits (406), Expect = 2.710e-43
Identity = 85/159 (53.46%), Postives = 111/159 (69.81%), Query Frame = 0
Query:    1 MELAGDAVQDLCRFLQVDALESTAHFPREMEDLRRRMEGVANYNGLRQQLTADMADSSQRVKAFVVRAEDARLLGDMPLMRKLYAELQTLNRKMIGEYAKRANNHQALLESLKEVKQAVQKASNLRVGQPKTRVVADCRTAIKANSADVLVQVICDGFD 159
            +++AG+ +QDLC  LQ++ LESTA FP EME  +  +  V  YN +R +LTA+MADSS  VKA +V+AED R+L DM  ++K+++ LQ  N+ +I EY KRANNHQ LL  LKEV   VQKAS LR+G  KTRVVA CR AIK N+   L Q++  G D
Sbjct:  392 LDVAGEMIQDLCAHLQIEELESTASFPDEMEKFKSVLLRVDEYNAVRLKLTAEMADSSNLVKALIVKAEDYRMLSDMSNLKKVFSNLQLTNQDLIAEYTKRANNHQQLLAQLKEVNMMVQKASKLRIGTAKTRVVASCRQAIKRNNIHELFQIMKTGHD 550          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2088.5437.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LMB8_ECTSI7.410e-7572.93Bardet-Biedl syndrome 2 n=1 Tax=Ectocarpus silicul... [more]
A0A7S3XR61_HETAK6.430e-5758.18Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2S5V3_9STRA3.350e-4857.32Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2XUU1_9STRA3.900e-4859.42Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2N0E0_9DINO4.390e-4755.83Hypothetical protein n=1 Tax=Alexandrium andersoni... [more]
A0A7S0HC64_9EUKA4.430e-4754.78Hypothetical protein n=1 Tax=Phaeocystis antarctic... [more]
A0A812SRY6_SYMPI1.560e-4653.70Bbs2 protein n=1 Tax=Symbiodinium pilosum TaxID=29... [more]
F0Y7H8_AURAN3.860e-4556.05Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S1IWS5_9EUGL4.040e-4553.25Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A0A7S1EYS9_NOCSC2.710e-4353.46Hypothetical protein n=1 Tax=Noctiluca scintillans... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 102..125
IPR029333Ciliary BBSome complex subunit 2, C-terminal domainPFAMPF14782BBS2_Ccoord: 1..154
e-value: 2.7E-66
score: 224.1
IPR016616Bardet-Biedl syndrome 2 proteinPANTHERPTHR32465FAMILY NOT NAMEDcoord: 1..155

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2088contigH-paniculata_contig2088:5535..10722 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2088.5437.1mRNA_H-paniculata_contig2088.5437.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2088 299..10881 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2088.5437.1 ID=prot_H-paniculata_contig2088.5437.1|Name=mRNA_H-paniculata_contig2088.5437.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=188bp
MELAGDAVQDLCRFLQVDALESTAHFPREMEDLRRRMEGVANYNGLRQQL
TADMADSSQRVKAFVVRAEDARLLGDMPLMRKLYAELQTLNRKMIGEYAK
RANNHQALLESLKEVKQAVQKASNLRVGQPKTRVVADCRTAIKANSADVL
VQVICDGFDPRGGDSVDNRVNNENGAIVLSPQRSPRK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029333BBS2_C
IPR016616Bardet-Biedl_syndrome_2_prot