mRNA_H-paniculata_contig20858.5424.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig20858.5424.1
Unique NamemRNA_H-paniculata_contig20858.5424.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig20858.5424.1 vs. uniprot
Match: D7FPZ1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPZ1_ECTSI)

HSP 1 Score: 365 bits (936), Expect = 3.180e-118
Identity = 234/381 (61.42%), Postives = 266/381 (69.82%), Query Frame = 2
Query:  146 MVAEVILEFMTGNPQLGVLSGRLAYYLDADNDSKDAKNAVANVNWT--------------DDSTGVTVYPAGPTSGSTSSSKYLPDRRSTLLCILSVPAHMIPTDILQFVAPMKKHVYSVRILRPCNPVGPSDPERTPVEYMVLLQMESQDSADELFLQCNGKRFNSFEDARCRVVFVATATFDLRAAAAAXXXXTSGVTASAVTAIPTPAFDTSSPSPGTIASANCASPEFTPVARSSLTGGAXXXXXXXXXXXXXXXXXXXXXXXXXXMKAAEVAAASALEHDAATCVICMDRMESQVLTTVCNHSFHVECLMKWQDSPCPVCRFHHNNASEASTCQECQATDNVWVCLICGSVLCGSRHEDHVRLHYTNTLHAYALEI 1246
            M   V LEFMTGNPQLGVLSGRL Y   + N+S D  +                       +S+ V      P+  +     +LP RR  LLC+LSVPAHM+PTD+L F AP K+ V+S+RILRPCNPVGPSDP +TP EYMVLLQMESQ SAD+ FLQCNGKRFNSFE+  CRVVFVA ATFDL A ++      +G +A   TA           S G  +SA    P+       S  G  XXXXXXXXXXXXXXXXXXXXXXXXXX     VA A+  E+DA+TCVICM+RMES+VLTTVCNHSFHVECLMKWQDSPCPVCRFHHNNASEASTCQECQA DN+WVCLICGSVLCGSRHEDH+R HY +TLHAYA+EI
Sbjct:    1 MDGAVSLEFMTGNPQLGVLSGRLTYLESSRNESGDGSSXXXXXXXXXXXXXXXXXXXXXGSNSSTVANTTYSPSFNADVLLDHLPQRRGKLLCLLSVPAHMVPTDMLHFAAPFKEQVHSLRILRPCNPVGPSDPAKTPAEYMVLLQMESQSSADDFFLQCNGKRFNSFEETTCRVVFVAKATFDLPADSSPPHTPPAG-SAVGATAXXXXXXXXXXGSGGISSSAGTP-PQLRTARHFSPIGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAQAAGWEYDASTCVICMERMESRVLTTVCNHSFHVECLMKWQDSPCPVCRFHHNNASEASTCQECQAADNLWVCLICGSVLCGSRHEDHIRGHYNSTLHAYAIEI 379          
BLAST of mRNA_H-paniculata_contig20858.5424.1 vs. uniprot
Match: A0A6H5K0J5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0J5_9PHAE)

HSP 1 Score: 214 bits (544), Expect = 5.310e-60
Identity = 151/265 (56.98%), Postives = 163/265 (61.51%), Query Frame = 2
Query:  557 SADELFLQCNGKRFNSFEDARCRVVFVATATFDLRAAAAAXXXXTSGVTASAVTAIPTPAFDTSSPSPGTIASANCASPEFTPVARSSLTGGAXXXXXXXXXXXXXXXXXXXXXXXXXXMKAAE-----------------------------------VAAASALEHDAATCVICMDRMESQVLTTVCNHSFHVECLMKWQDSPCPVCRFHHNNASEASTCQECQATDNVWVCLICGSVLCGSRHEDHVRLHYTNTLHAYALEI 1246
            SAD+ FLQCNGKRFNSFE+  CRVVFVA ATFDL A +                                       SP  TP A        XXXXXXXXXXXXXXXXXXXXXXXXXX                                        VA A+  E+DA+TCVICM+ MES+VLTTVCNHSFHVECLMKWQDSPCPVCRFHHNNASEASTCQECQATDN+WVCLICGSVLCGSRHEDH+R HY +TLHAYA+EI
Sbjct:    9 SADDFFLQCNGKRFNSFEETTCRVVFVAKATFDLPADS---------------------------------------SPPHTPPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAQAAGWEYDASTCVICMEHMESRVLTTVCNHSFHVECLMKWQDSPCPVCRFHHNNASEASTCQECQATDNLWVCLICGSVLCGSRHEDHIRGHYNSTLHAYAIEI 234          
BLAST of mRNA_H-paniculata_contig20858.5424.1 vs. uniprot
Match: A0A835YPP8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPP8_9STRA)

HSP 1 Score: 193 bits (490), Expect = 1.630e-51
Identity = 127/299 (42.47%), Postives = 163/299 (54.52%), Query Frame = 2
Query:  353 LPDRRSTLLCILSVPAHMIPTDILQFVAPMKKHVYSVRILRPCNPVGPSDPERTPVEYMVLLQMESQDSADELFLQCNGKRFNSFEDARCRVVFVATATFDLRAAAAAXXXXTSGVTASAVTAIPTPAFDTSSPSPGTIASANCASPEFTPVARSSLTGGAXXXXXXXXXXXXXXXXXXXXXXXXXXMKAAEVAAASALEHDAATCVICMDRMESQVLTTVCNHSFHVECLMKWQDSPCPVCRFHHNNASEASTCQECQATDNVWVCLICGSVLCGSRHED-HVRLHYTNTLHAYALEI 1246
            LP+ R  LLCI S+PAHM+PTD+LQ  AP ++ +  VRILRPC     SD ER  +EYMV+LQM +Q+ AD  + Q NG+ F+S E+A C VVFVA+ +F             S  + SA+ A+P              A+A  A P  T  A  S  GGA                           +A E A           CVIC +++E   LTT C H+FH+EC+  WQDSPCPVCRFHHN + + STCQEC  + NV VCLICG V CG R +  H+  H+  TLHAYAL++
Sbjct:  214 LPEGRGCLLCITSMPAHMVPTDMLQLFAPFRQSMSYVRILRPCRG---SDSER--LEYMVVLQMLNQELADSFYRQYNGQPFSSMEEACCEVVFVASISF-------IDAQDGSCDSISALGALPNACAT---------AAAAAAGPADTSQALHS--GGA---------------------------EAREDA-----------CVICFEKLEGGTLTTACKHTFHIECIALWQDSPCPVCRFHHNGSGDDSTCQECGRSVNVHVCLICGYVGCGGREQGGHMSQHHLATLHAYALDV 451          
BLAST of mRNA_H-paniculata_contig20858.5424.1 vs. uniprot
Match: H3GNL2_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GNL2_PHYRM)

HSP 1 Score: 174 bits (441), Expect = 1.830e-45
Identity = 116/362 (32.04%), Postives = 167/362 (46.13%), Query Frame = 2
Query:  170 FMTGNPQLGVLSGRLAYYLDADNDSKDAKNAVANVNWTDDSTGVTVYPAGPTSGSTSSSKYLPDRRSTLLCILSVPAHMIPTDILQFVAPMKKHVYSVRILRPCNPVGPSDPERTPVEYMVLLQMESQDSADELFLQCNGKRFNSFEDARCRVVFVATATFDLRAAAAAXXXXTSGVTASAVTAIPTPAFDTSSPSPGTIASANCASPEFTPVARSSLTGGAXXXXXXXXXXXXXXXXXXXXXXXXXXMKAAEVAAASALEHDAATCVICMDRME---SQVLTTVCNHSFHVECLMKWQDSPCPVCRFHHNNASEASTCQECQATDNVWVCLICGSVLCGSRHEDHVRLHYTNTLHAYALEI 1246
            F+ GNPQ+ V +G+L +Y  AD     A +A                         S S+ LP  RSTL+C+++VP+HM P +IL+F+A  ++ +  VRIL+        DPER+    MVL+Q  SQ+ AD+ FL  NGK FNS E  RC++VFV +  FD                         P      P        +C + E       +    A                          M             +  TC +C+DR++   S +LTT+CNHSFH +CL +W+ S CPVCR+ H +    S+C+ C  T+++W+CLICG V CG    +H + HY  TLH Y+LE+
Sbjct:   35 FLAGNPQVRVTTGKLRFYR-ADKPYSSASSA-------------------------SPSQQLPTERSTLVCVVTVPSHMSPVEILEFLASFRQDIALVRILK--------DPERS--NCMVLMQFNSQERADQFFLDHNGKYFNSIEQERCKIVFVRSIEFD-------------------------PVLGGDHP--------DCDALEEKQTDEETAVAAATPLSPRSERRASSAQMRKLFPPPPVGMT------------EIPTCAVCLDRLDASASGILTTLCNHSFHCDCLFRWEGSSCPVCRYSHGDIG--SSCEVCGTTEHLWICLICGHVGCGRYSGEHAKQHYQETLHTYSLEL 313          
BLAST of mRNA_H-paniculata_contig20858.5424.1 vs. uniprot
Match: W2PVR5_PHYPN (Uncharacterized protein n=8 Tax=Phytophthora parasitica TaxID=4792 RepID=W2PVR5_PHYPN)

HSP 1 Score: 170 bits (431), Expect = 2.340e-45
Identity = 118/366 (32.24%), Postives = 175/366 (47.81%), Query Frame = 2
Query:  170 FMTGNPQLGVLSGRLAYYLDADNDSKDAKNAVANVNWTDDSTGVTVYPAGPTSGSTSSSKYLPDRRSTLLCILSVPAHMIPTDILQFVAPMKKHVYSVRILRPCNPVGPSDPERTPVEYMVLLQMESQDSADELFLQCNGKRFNSFEDARCRVVFVATATFDLRAAAAAXXXXTSGVTASAVTAIPTPAFDTSSPSPGTIASANCASP----EFTPVARSSLTGGAXXXXXXXXXXXXXXXXXXXXXXXXXXMKAAEVAAASALEHDAATCVICMDRME---SQVLTTVCNHSFHVECLMKWQDSPCPVCRFHHNNASEASTCQECQATDNVWVCLICGSVLCGSRHEDHVRLHYTNTLHAYALEI 1246
            F+ GNPQ+   +G+L +Y  AD                        Y +  +SG    S+ LP+ RSTL+C+++VP+HM P +IL+F+A  ++ +  VRIL+        DPER+    MVL+Q  SQ+ AD+ F   NGK FNS E  RC++VFV +  FD                  A+    T   DT++P P +  S   AS     +  P   + +T                                           +  TC +C+DR++   S +LTT+CNHSFH +CL +W+ S CPVCR+ H +    S+C+ C   +++W+CLICG V CG    +H + HY  TLH Y+LE+
Sbjct:   35 FLAGNPQVRETTGKLRFYR-ADK----------------------PYSSSSSSGG---SQQLPNERSTLVCVVTVPSHMSPVEILEFLASFREDIALVRILK--------DPERS--NCMVLMQFNSQERADQFFQVHNGKYFNSIEQERCKIVFVRSIEFD-------PVIDEDDPDCDALEEKHTDGEDTAAPMPSSPRSERRASNAQIRKLFPPPPAGMT-------------------------------------------EIPTCAVCLDRLDASASGILTTLCNHSFHCDCLFRWEGSSCPVCRYSHGDIG--SSCEVCGTAEHLWICLICGHVGCGRYSGEHAKQHYQETLHTYSLEL 312          
BLAST of mRNA_H-paniculata_contig20858.5424.1 vs. uniprot
Match: M4B1G8_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B1G8_HYAAE)

HSP 1 Score: 172 bits (435), Expect = 5.850e-45
Identity = 114/362 (31.49%), Postives = 184/362 (50.83%), Query Frame = 2
Query:  170 FMTGNPQLGVLSGRLAYYLDADNDSKDAKNAVANVNWTDDSTGVTVYPAGPTSGSTSSSKYLPDRRSTLLCILSVPAHMIPTDILQFVAPMKKHVYSVRILRPCNPVGPSDPERTPVEYMVLLQMESQDSADELFLQCNGKRFNSFEDARCRVVFVATATFDLRAAAAAXXXXTSGVTASAVTAIPTPAFDTSSPSPGTIASANCASPEFTPVARSSLTGGAXXXXXXXXXXXXXXXXXXXXXXXXXXMKAAEVAAASALEHDAATCVICMDRME---SQVLTTVCNHSFHVECLMKWQDSPCPVCRFHHNNASEASTCQECQATDNVWVCLICGSVLCGSRHEDHVRLHYTNTLHAYALEI 1246
            F+TGNPQ+ V++G+L +Y        D       ++ ++ +   + +    T+ S   ++ LP  RS L+C+++VP+HM P +IL+F++  ++++  VRIL+        D ER     MVL+Q ++QD AD+ FL+  GK FNS E  RC++VFV +  FDL A           +T  A+        +  +     +AS   +S   +  +R  +                               K   +  A   E    TC +C+DR++   S +LTT+CNHSFH +CL +W+ S CPVCR+ H +    S+C+ C   +++W+CLICG V CG    +H + HY +TLH Y+LE+
Sbjct:   28 FLTGNPQVRVITGKLRFY------RADETYTTPTLSISNHTNSSSSFSGTSTTSSALLTQQLPRERSALVCVVTVPSHMSPVEILEFLSSFRENIALVRILK--------DSERN--NCMVLVQFQTQDRADQFFLEHTGKYFNSIEQERCKIVFVRSIEFDLVAGE-------DQLTCDALE-------EKDAGGDKIVASGLMSSQSESRTSRMQMR------------------------------KLFPLPPAGMTEIP--TCAVCLDRLDASASGILTTLCNHSFHCDCLFRWEGSSCPVCRYSHGDIG--SSCEVCGTAEHLWICLICGHVGCGRYSGEHAKEHYQDTLHTYSLEL 325          
BLAST of mRNA_H-paniculata_contig20858.5424.1 vs. uniprot
Match: A0A8K1CCW0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CCW0_PYTOL)

HSP 1 Score: 171 bits (434), Expect = 1.540e-44
Identity = 141/371 (38.01%), Postives = 192/371 (51.75%), Query Frame = 2
Query:  143 TMVAEVILEFMTGNPQLGVLSGRLAYYLDADNDSKDAKNAVANVNWTDDSTGVTVYPAGPTSGSTSSSKYLPDRRSTLLCILSVPAHMIPTDILQFVAPMKKHVYSVRILRPCNPVGPSDPERTPVEYMVLLQMESQDSADELFLQCNGKRFNSFEDARCRVVFVATATFDLRAAAAAXXXXTSGVTASAVTAIPTPAFDTSSPSPGTIASANCASPEFTPVARSSLTGGAXXXXXXXXXXXXXXXXXXXXXXXXXXMKAAEVAAASALEHDAATCVICMDRME---SQVLTTVCNHSFHVECLMKWQDSPCPVCRFHHNNASEASTCQECQATDNVWVCLICGSVLCGSRHEDHVRLHYTNTLHAYALEI 1246
            T++ E    F+TGNPQ+ V +G+L +Y          +     + W   +T  T  PA  T G       LP  R+TLLCI++VP+HM P ++L+F+A  +  +  VRIL+        DPER+    M LLQ  +QD AD  FL  NG  FNS E  RC++VFV +                               FDTS P P         SP+ T     S+          XXXXXXXXXXXXXXXXXXXX    E+           TC +C+DR++   S +LTT+CNH+FH +CL +W+ S CPVCR+ H +   A  C+ CQ T+++W+CLICG V CG    +H + HY  T+H Y+LE+
Sbjct:   24 TLLTEDGARFLTGNPQVCVSTGKLRFY----------RPNRPYLQWP--TTSTTASPA--TLG-------LPAERNTLLCIVTVPSHMSPVELLEFLAGFRSDIQLVRILK--------DPERS--NCMALLQFAAQDRADHFFLAHNGTYFNSIELERCKIVFVRSIE-----------------------------FDTSEPEP---------SPDSTEQKADSIE--------EXXXXXXXXXXXXXXXXXXXXXGMTEIP----------TCAVCLDRLDASASGILTTLCNHTFHCDCLFRWEGSSCPVCRYSHGDIGSA--CEVCQTTEHLWICLICGHVGCGRYSGEHAKQHYQETMHTYSLEL 305          
BLAST of mRNA_H-paniculata_contig20858.5424.1 vs. uniprot
Match: A0A833TQ33_PHYIN (Zn-finger in ubiquitin-hydrolases and other protein n=34 Tax=Phytophthora TaxID=4783 RepID=A0A833TQ33_PHYIN)

HSP 1 Score: 171 bits (432), Expect = 2.970e-44
Identity = 116/363 (31.96%), Postives = 171/363 (47.11%), Query Frame = 2
Query:  170 FMTGNPQLGVLSGRLAYYLDADNDSKDAKNAVANVNWTDDSTGVTVYPAGPTSGSTSSSKYLPDRRSTLLCILSVPAHMIPTDILQFVAPMKKHVYSVRILRPCNPVGPSDPERTPVEYMVLLQMESQDSADELFLQCNGKRFNSFEDARCRVVFVATATFDLRAAAAAXXXXTSGVTASAVTAIPTPAFDTSSPSPGTIASA-NCASPEFTPVARSSLTGGAXXXXXXXXXXXXXXXXXXXXXXXXXXMKAAEVAAASALEHDAATCVICMDRME---SQVLTTVCNHSFHVECLMKWQDSPCPVCRFHHNNASEASTCQECQATDNVWVCLICGSVLCGSRHEDHVRLHYTNTLHAYALEI 1246
            F+ GNPQ+ V +G+L +                             Y A     S+SS++ LP  RSTL+C+++VP+HM P +IL+F+A  ++ +  VRIL+        DPER+    MVL+Q  SQ+ AD+ F   NGK FNS E  RC++VFV +  FD            +     A+        D + PSP +   A N    +  P   + +T                                           +  TC +C+DR++   S +LTT+CNHSFH +CL +W+ S CPVCR+ H +    S+C+ C   D++W+CLICG V CG    +H + HY  TLH Y+LE+
Sbjct:   35 FLAGNPQVRVTTGKLRF-----------------------------YRADKPYSSSSSTQQLPKERSTLVCVVTVPSHMSPVEILEFLASFREDIALVRILK--------DPERS--NCMVLMQFNSQERADQFFQAHNGKYFNSIEQERCKIVFVRSIEFD-------PVIGENDPDYDALEEKRADGEDDAPPSPRSERRASNAQMRKLFPPPPAGMT-------------------------------------------EIPTCAVCLDRLDASASGILTTLCNHSFHCDCLFRWEGSSCPVCRYSHGDIG--SSCEVCGTADHLWICLICGHVGCGRYSGEHAKQHYQETLHTYSLEL 306          
BLAST of mRNA_H-paniculata_contig20858.5424.1 vs. uniprot
Match: A0A5D6XNV3_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XNV3_9STRA)

HSP 1 Score: 167 bits (422), Expect = 1.540e-42
Identity = 120/362 (33.15%), Postives = 172/362 (47.51%), Query Frame = 2
Query:  170 FMTGNPQLGVLSGRLAYYLDADNDSKDAKNAVANVNWTDDSTGVTVYPAGPTSGSTSSSKYLPDRRSTLLCILSVPAHMIPTDILQFVAPMKKHVYSVRILRPCNPVGPSDPERTPVEYMVLLQMESQDSADELFLQCNGKRFNSFEDARCRVVFVATATFDLRAAAAAXXXXTSGVTASAVTAIPTPAFDTSSPSPGTIASANCASPEFTPVARSSLTGGAXXXXXXXXXXXXXXXXXXXXXXXXXXMKAAEVAAASALEHDAATCVICMDRME---SQVLTTVCNHSFHVECLMKWQDSPCPVCRFHHNNASEASTCQECQATDNVWVCLICGSVLCGSRHEDHVRLHYTNTLHAYALEI 1246
            F+TGNP + V  G+L ++        +     AN    D  +      AG  +G +   ++LP  R+TLLCI++VP+HM P ++L+F+A  +  V SVR+L+        DP+R+    M LLQ  SQ+ AD+ FL  NG  FNS E  RC++VFV +  FD  A  +     T GV               S                     R SLT  A     XXX                                +  TC +C+DR++   S +LTT+CNH+FH +CL +W+ S CPVCR+ H +    S C+ C  T+++W+CLICG V CG    +H + HY  TLH Y+LE+
Sbjct:   54 FLTGNPLVRVTRGKLRFFRPDSTLPTETVPKEAN----DQPSAPRTADAG--AGGSGPLQHLPRERNTLLCIVTVPSHMAPVELLEFLAGFRADVASVRVLQ--------DPDRS--NCMALLQFASQERADQFFLAHNGTYFNSIEQERCKIVFVRSIEFDAVAGGSGGCAAT-GVEERXXXXXXXXXXXRS---------------------RKSLTVSARTLFPXXXPGMT----------------------------EIPTCAVCLDRLDASASGILTTLCNHTFHCDCLFRWEGSSCPVCRYSHGDI--VSACEVCHTTEHLWICLICGHVGCGRYSGEHAKQHYQETLHTYSLEL 347          
BLAST of mRNA_H-paniculata_contig20858.5424.1 vs. uniprot
Match: K3W6P2_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W6P2_GLOUD)

HSP 1 Score: 165 bits (417), Expect = 7.570e-42
Identity = 111/362 (30.66%), Postives = 168/362 (46.41%), Query Frame = 2
Query:  170 FMTGNPQLGVLSGRLAYYLDADNDSKDAKNAVANVNWTDDSTGVTVYPAGPTSGSTSSSKYLPDRRSTLLCILSVPAHMIPTDILQFVAPMKKHVYSVRILRPCNPVGPSDPERTPVEYMVLLQMESQDSADELFLQCNGKRFNSFEDARCRVVFVATATFDLRAAAAAXXXXTSGVTASAVTAIPTPAFDTSSPSPGTIASANCASPEFTPVARSSLTGGAXXXXXXXXXXXXXXXXXXXXXXXXXXMKAAEVAAASALEHDAATCVICMDRME---SQVLTTVCNHSFHVECLMKWQDSPCPVCRFHHNNASEASTCQECQATDNVWVCLICGSVLCGSRHEDHVRLHYTNTLHAYALEI 1246
            F+TGNPQ+ V +G+L +Y                    D      + P   T+ ++S+ + LP  R+TLLCI++VP+HM P ++L+F+A  +  + SVR+L+        DP+R+    M LLQ  +QD AD+ F+  NG  FNS E  RC++VFV +  +D             G   S          D    S  ++ S   AS  F P                                                  +  TC +C+DR++   S +LTT+CNH+FH +CL +W+ S CPVCR+ H +    S C+ C  T+++W+CLICG V CG    +H + H+  T H Y+LE+
Sbjct:   71 FLTGNPQVRVTTGKLRFYRP------------------DQPYVHKLSPFAATTATSSAYQQLPHERNTLLCIVTVPSHMSPVELLEFLAGFRDDIASVRVLQ--------DPDRS--NCMALLQFVTQDRADQFFMAHNGTYFNSIEQERCKIVFVRSIEYD---------SVVDGAIGSLADGYSNHEQD-EEVSTVSVKSPKLASKRFPPPPPGMT--------------------------------------------EIPTCAVCLDRLDASASGILTTLCNHTFHCDCLFRWEGSSCPVCRYSHGDI--VSACEVCHTTEHLWICLICGHVGCGRYSGEHAKQHFQETSHTYSLEL 348          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig20858.5424.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPZ1_ECTSI3.180e-11861.42Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K0J5_9PHAE5.310e-6056.98Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YPP8_9STRA1.630e-5142.47Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
H3GNL2_PHYRM1.830e-4532.04Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
W2PVR5_PHYPN2.340e-4532.24Uncharacterized protein n=8 Tax=Phytophthora paras... [more]
M4B1G8_HYAAE5.850e-4531.49Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
A0A8K1CCW0_PYTOL1.540e-4438.01Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A833TQ33_PHYIN2.970e-4431.96Zn-finger in ubiquitin-hydrolases and other protei... [more]
A0A5D6XNV3_9STRA1.540e-4233.15Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
K3W6P2_GLOUD7.570e-4230.66Uncharacterized protein n=1 Tax=Globisporangium ul... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig20858contigH-paniculata_contig20858:84..4080 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score370.9
Seed ortholog evalue6.7e-100
Seed eggNOG ortholog2880.D7FPZ1
KEGG koko:K00413,ko:K10632
KEGG Pathwayko00190,ko01100,ko02020,ko04014,ko04260,ko04714,ko04932,ko05010,ko05012,ko05016,map00190,map01100,map02020,map04014,map04260,map04714,map04932,map05010,map05012,map05016
KEGG ModuleM00151,M00152
Hectar predicted targeting categoryother localisation
GOsGO:0000151,GO:0000165,GO:0003674,GO:0003824,GO:0004842,GO:0005048,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005737,GO:0005829,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0007154,GO:0007165,GO:0007264,GO:0007265,GO:0008139,GO:0008150,GO:0008152,GO:0008270,GO:0009636,GO:0009966,GO:0009968,GO:0009987,GO:0010033,GO:0010646,GO:0010648,GO:0012505,GO:0016020,GO:0016310,GO:0016567,GO:0016740,GO:0019538,GO:0019787,GO:0023014,GO:0023051,GO:0023052,GO:0023057,GO:0031090,GO:0031965,GO:0031967,GO:0031975,GO:0032182,GO:0032446,GO:0032991,GO:0033218,GO:0035556,GO:0036211,GO:0042221,GO:0042277,GO:0042493,GO:0042802,GO:0043130,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0045471,GO:0046677,GO:0046872,GO:0046914,GO:0048519,GO:0048523,GO:0048583,GO:0048585,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0061630,GO:0061659,GO:0065007,GO:0070647,GO:0071704,GO:0097305,GO:0140096,GO:1901564,GO:1901700,GO:1902494,GO:1990234
EggNOG free text desc.nuclear localization sequence binding
EggNOG OGsKOG0804@1,KOG0804@2759
EC2.3.2.27
COG Functional cat.GO
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko04121
Exons4
Model size1246
Cds size1101
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig20858.5424.1prot_H-paniculata_contig20858.5424.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig20858 229..4080 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929546.3294094-UTR-H-paniculata_contig20858:83..2281622929546.3294094-UTR-H-paniculata_contig20858:83..228Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig20858 84..228 +
1691480908.001036-UTR-H-paniculata_contig20858:83..2281691480908.001036-UTR-H-paniculata_contig20858:83..228Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig20858 84..228 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929546.3395953-CDS-H-paniculata_contig20858:228..6361622929546.3395953-CDS-H-paniculata_contig20858:228..636Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig20858 229..636 +
1691480908.0134249-CDS-H-paniculata_contig20858:228..6361691480908.0134249-CDS-H-paniculata_contig20858:228..636Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig20858 229..636 +
1622929546.3583875-CDS-H-paniculata_contig20858:3097..33401622929546.3583875-CDS-H-paniculata_contig20858:3097..3340Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig20858 3098..3340 +
1691480908.0223527-CDS-H-paniculata_contig20858:3097..33401691480908.0223527-CDS-H-paniculata_contig20858:3097..3340Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig20858 3098..3340 +
1622929546.3750734-CDS-H-paniculata_contig20858:3409..37331622929546.3750734-CDS-H-paniculata_contig20858:3409..3733Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig20858 3410..3733 +
1691480908.0312648-CDS-H-paniculata_contig20858:3409..37331691480908.0312648-CDS-H-paniculata_contig20858:3409..3733Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig20858 3410..3733 +
1622929546.3879073-CDS-H-paniculata_contig20858:3954..40801622929546.3879073-CDS-H-paniculata_contig20858:3954..4080Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig20858 3955..4080 +
1691480908.0412123-CDS-H-paniculata_contig20858:3954..40801691480908.0412123-CDS-H-paniculata_contig20858:3954..4080Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig20858 3955..4080 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig20858.5424.1

>prot_H-paniculata_contig20858.5424.1 ID=prot_H-paniculata_contig20858.5424.1|Name=mRNA_H-paniculata_contig20858.5424.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=367bp
MVAEVILEFMTGNPQLGVLSGRLAYYLDADNDSKDAKNAVANVNWTDDST
GVTVYPAGPTSGSTSSSKYLPDRRSTLLCILSVPAHMIPTDILQFVAPMK
KHVYSVRILRPCNPVGPSDPERTPVEYMVLLQMESQDSADELFLQCNGKR
FNSFEDARCRVVFVATATFDLRAAAAAAAAATSGVTASAVTAIPTPAFDT
SSPSPGTIASANCASPEFTPVARSSLTGGAGAGAATVDTSVGVGVVSSSA
SGVGVGMKAAEVAAASALEHDAATCVICMDRMESQVLTTVCNHSFHVECL
MKWQDSPCPVCRFHHNNASEASTCQECQATDNVWVCLICGSVLCGSRHED
HVRLHYTNTLHAYALEI
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mRNA from alignment at H-paniculata_contig20858:84..4080+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig20858.5424.1 ID=mRNA_H-paniculata_contig20858.5424.1|Name=mRNA_H-paniculata_contig20858.5424.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3997bp|location=Sequence derived from alignment at H-paniculata_contig20858:84..4080+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
TCTAAGCTCAAGAATCAAGGAAATTGTGAGATAGCCGTAGTACGGGACTT GTCCGTTTTAACATACGGTTTTAGACTGCCCTTTGAGAAGCAGAATCCTC AGCCAGCCTGACCTGAGCTCTGGTGTCTTGACTGTACTGTCTACCATGGT AGCGGAAGTGATTCTAGAGTTCATGACGGGAAACCCGCAGCTTGGAGTGC TGTCGGGGAGGCTGGCTTACTATCTCGATGCTGACAATGACAGCAAAGAC GCGAAGAACGCTGTGGCCAACGTGAACTGGACGGACGACAGTACCGGGGT TACTGTTTACCCCGCAGGTCCCACGAGCGGCTCGACTTCCAGCTCGAAGT ACCTACCTGATCGGCGCAGCACGCTGCTCTGCATTTTGTCGGTGCCGGCC CATATGATCCCGACAGACATACTCCAGTTCGTGGCGCCTATGAAGAAGCA TGTATATTCTGTGAGAATTTTGCGCCCCTGCAACCCTGTCGGGCCTAGCG ACCCGGAGAGGACACCGGTGGAGTACATGGTGCTGTTACAGATGGAGAGT CAGGTGTGATCACCGCGCACACCGTGTCGCGGCGCGCACTCACGCATGCT TACGGGAGTGGATAGTGTAGAGTGAGTGGAGGACTTTGGTATATGTTTGT TGTCACTCTGGGAGTTTGGTGGACGGGCTGTGATGTGGCGGTCATCGACC AGCTGTCATAAGATATACCGCACTGATGTACTGCGCTTGGTGTAGAGTAC AGTACCAGTATCTGTCTCGATGTAAATTTCATCACGGCTAAAGTTTTGAG ATAATTCATTAAATTTACTGCCTGGTACTTCTTTGTGCTGTTAATACATA TGATACCAGCGTGAACTGTTGACCGGAGCGCGAGATACAAGATACCCTCT GAGGGCGGATACAGTACGGCCTCGCTGACAAGAAATCACCCAAAAATAGC TTGAGGCTCAATTTTTACTAATTTAACAAGCATAAATAAGAAATCTGGTT AAAGAAATCGGGGCTCAAATTGTGGCCTAATACTAATCCCTATATAAAAG TGAGAAACAGTACTGTGTGCGTTTTTCGTCAAAGTAAGGTTTTGAGCCTC ACGGGAAGTCAGAGTTTCTTATCATCGGACCCGTACTATATTTCGAACGG TCCTATACATGGCTTGTGCTTCGTGCCTCGCTGTCGGTTGGTTCGCCGCT GTGTTTGTACCGTCCAAAGTAACCAGAGTGCAGTCAGTAGTCAGTACGTC GTCAGTGATTCGAGGCTTTTGTTGGTGTTGTCCATGCTAATAATATAGCG TGCTGCTGACGGAGGTTTTCGTGCATTCTTCGCAATGCAATCCAGGCCTA GCCGAATTTTCTTCAGGCCCCCTGCCAGAAATACAAGTGTTGCTGGAAAA TACTCTTCCTAGAGCTGCTTTGTGTTTATTTTTTACTTAAGAACTATGCA TACAAACATCAACCCTTTGGCGCCGCAAGATGTTTCGAAACAATATAGGT TACCTGGTATCTGAGAATGGACGTCAAGCGCTGCCGTTGTTGGGGGCAGA ACTAGATAGATACCCAGTGCCTGTGTGTACTGTATTTACTGCCTGTAATG GACCCCATGTCCGAACAGCGTTGACTCCATATCCCCGTGGTCATGTTACA GACGTCGTTTTCCAATGATTTTTACATGTAAATGTTCAAGGATTGGCTAT TGATTATTCAGGGAATAGCTGGGAACCGGCGCTAGAAGATTTGATCCTTT GAACGCGAACAACAAAAAATGATCAGCAGTCCAGTGGGCGAAAATGGTTG TGCGAGGGAAGAGAGGCCAATTTACTGTGGAATAGCTCGCGCAGCTCGTG GTCTTTTTGTAGGGATATTATAGTTCAGCTGATGGAACTGCGATGTGTTG GTTTGAGCGGTGGCACAGAGTTGTGCAGAGATTTTGATTGCTGCAGACTA CAGATACACTACAGAGAACAGACACGCAAACAAGCAAAAAGCGGCAAAAT CTGGCGAGGTGAACTCAGACTTATTCGGGGGGAAGGGACCAATCACAGGA CTATATTAGTTCCCCTACACTTTGATTAAGTGTCTACAAAAGTGAGTAGC ACGTTTAAGCTTTTGCGCTCAAGGAGGTATCACTTTTCAGTCGTTTCTGT TCGACGAACGTGAAACGCTGGCCATTATAGCAACAACGATGCGTTTGCTT CGTGAGGAGGTGGTACTGCTGACGGACTCGAGGTAAATGCATCGGTTCGA TTGAGCAGTGACAGCCAGTTAGGCGCAGATTCAAAAGAATATAGTAGTTA ATGGTTGTGCATGGCGATGACGATGGACGAAGCAGACAGGGAATAAGATG ATTGTGTACTGCAGGACGCAGGACCATTTTTGTCTGCGTGCGGGCTGTGC TACTACGGTTGCTGCAAAACAATAGATGGAGCACGAAAGAGAGGTACCAG TGTCATCCATCAGATGGCAGCGGTATTTAGCCGCTCTGCATTTATATGTC AGATGCTGTTGTCCGTGGTGATTACCTGATACAGCAGCGGGAAGTCTGTC CCCAAATCTTGACAGGTGGAACATGACATATACATTTTGTACTTATCCAC ACGGAATATTCGAACCCTCATGTCCCGCGCCCGTGTACGTGAGCATTGGG CTTTCTGCGAGAACAAGTGTTCAGGTCATGGCGTTTTAGTTCTGTACGGT ATCTTATTGTTGACCTTCACTTCAGCAGGAATGTCCGTAATACACCGCAA TTGCTAGGCTGGCAGCACAGGATTAAAATGGAATTGTTACTCACTGTCTG CCCTGGTAAGCGCTGGACAGTCTGAGCAGCAAGTACATGAACATGAGCAA GGAATGAAAGGACCATAATGACAAGAAAAGTTCAGTATGCGACAGGCATT GTCTTCGTGGAATGATATTGCTCTGTCCCATGACCAGCCAACCAGTCGAC CACGACCGAATCGCATTTGGTAATCCCATTTTTTTTTTCTTCTTCCACAT GACAATAAATACAGGATAGCGCGGACGAACTGTTTCTCCAGTGCAACGGG AAACGCTTCAATAGCTTCGAGGATGCTCGCTGCCGCGTGGTGTTCGTTGC CACCGCCACATTCGACCTTCGCGCCGCAGCCGCCGCCGCGGCCGCAGCCA CTTCTGGAGTTACAGCTTCTGCGGTAACAGCTATACCAACCCCCGCCTTC GACACCTCATCTCCCTCTCCCGGAACAATCGCATCCGCAAATTGTGCCTC CCCCGAAGTGCCGATTCCTGTTGTTGCCATAGATCCGCCTGTATCACCTC GGCACATAGCCGCTAGTTCCATGAAGTTTACGCCCGTGGCGAGGTCTTCG CTTACGGGCGGCGCCGGCGCCGGCGCCGCCACTGTTGATACAAGTGTTGG TGTTGGTGTTGTTAGTTCGTCTGCGTCGGGGGTGGGGGTGGGGATGAAAG CTGCGGAGGTTGCCGCTGCTTCCGCGTTGGAGCATGACGCGGCGACTTGC GTAATTTGCATGGATAGGATGGAGTCGCAGGTGCTGACTACTGTCTGCAA CCATAGCTTCCACGTGGAGTGCTTGATGAAGTGGCAAGATAGTCCCTGTC CTGTGTGTCGGTTCCACCACAACAATGCGAGCGAGGCGTCTACTTGTCAG GTGCGGCGAGAGAAACGGAATAAAACGAAGGTGCTTCGATGGCTTTATGT TTCATTTTCGTCGCCGTTGTTGGGGGGGATAGGGGTGTGGGTCGGGGTGG GGTGGGTTATTGTTGTTGCTCTACTGTTTGTGTTTCATGCTGCCTCGTCG CGACGGAATCCCGTTGCAAAGCTGTTCTCCTATGCTCCGGCGTGTTACCT TGGCCGCGTGAACCCTTGCAGGAATGCCAGGCGACGGACAATGTGTGGGT TTGCTTGATCTGCGGCAGCGTACTGTGCGGCTCTCGACACGAGGACCACG TGCGGTTGCACTACACCAACACCTTGCACGCCTACGCTCTAGAAATA
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Coding sequence (CDS) from alignment at H-paniculata_contig20858:84..4080+

>mRNA_H-paniculata_contig20858.5424.1 ID=mRNA_H-paniculata_contig20858.5424.1|Name=mRNA_H-paniculata_contig20858.5424.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2202bp|location=Sequence derived from alignment at H-paniculata_contig20858:84..4080+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGTAGCGGAAGTGATTCTAGAGTTCATGACGGGAAACCCGCAGCTTGG
AGTGCTGTCGGGGAGGCTGGCTTACTATCTCGATGCTGACAATGACAGCA
AAGACGCGAAGAACGCTGTGGCCAACGTGAACTGGACGGACGACAGTACC
GGGGTTACTGTTTACCCCGCAGGTCCCACGAGCGGCTCGACTTCCAGCTC
GAAGTACCTACCTGATCGGCGCAGCACGCTGCTCTGCATTTTGTCGGTGC
CGGCCCATATGATCCCGACAGACATACTCCAGTTCGTGGCGCCTATGAAG
AAGCATGTATATTCTGTGAGAATTTTGCGCCCCTGCAACCCTGTCGGGCC
TAGCGACCCGGAGAGGACACCGGTGGAGTACATGGTGCTGTTACAGATGG
AGAGTCAGATGGTAGCGGAAGTGATTCTAGAGTTCATGACGGGAAACCCG
CAGCTTGGAGTGCTGTCGGGGAGGCTGGCTTACTATCTCGATGCTGACAA
TGACAGCAAAGACGCGAAGAACGCTGTGGCCAACGTGAACTGGACGGACG
ACAGTACCGGGGTTACTGTTTACCCCGCAGGTCCCACGAGCGGCTCGACT
TCCAGCTCGAAGTACCTACCTGATCGGCGCAGCACGCTGCTCTGCATTTT
GTCGGTGCCGGCCCATATGATCCCGACAGACATACTCCAGTTCGTGGCGC
CTATGAAGAAGCATGTATATTCTGTGAGAATTTTGCGCCCCTGCAACCCT
GTCGGGCCTAGCGACCCGGAGAGGACACCGGTGGAGTACATGGTGCTGTT
ACAGATGGAGAGTCAGGATAGCGCGGACGAACTGTTTCTCCAGTGCAACG
GGAAACGCTTCAATAGCTTCGAGGATGCTCGCTGCCGCGTGGTGTTCGTT
GCCACCGCCACATTCGACCTTCGCGCCGCAGCCGCCGCCGCGGCCGCAGC
CACTTCTGGAGTTACAGCTTCTGCGGTAACAGCTATACCAACCCCCGCCT
TCGACACCTCATCTCCCTCTCCCGGAACAATCGCATCCGCAAATTGTGCC
TCCCCCGAAGATAGCGCGGACGAACTGTTTCTCCAGTGCAACGGGAAACG
CTTCAATAGCTTCGAGGATGCTCGCTGCCGCGTGGTGTTCGTTGCCACCG
CCACATTCGACCTTCGCGCCGCAGCCGCCGCCGCGGCCGCAGCCACTTCT
GGAGTTACAGCTTCTGCGGTAACAGCTATACCAACCCCCGCCTTCGACAC
CTCATCTCCCTCTCCCGGAACAATCGCATCCGCAAATTGTGCCTCCCCCG
AATTTACGCCCGTGGCGAGGTCTTCGCTTACGGGCGGCGCCGGCGCCGGC
GCCGCCACTGTTGATACAAGTGTTGGTGTTGGTGTTGTTAGTTCGTCTGC
GTCGGGGGTGGGGGTGGGGATGAAAGCTGCGGAGGTTGCCGCTGCTTCCG
CGTTGGAGCATGACGCGGCGACTTGCGTAATTTGCATGGATAGGATGGAG
TCGCAGGTGCTGACTACTGTCTGCAACCATAGCTTCCACGTGGAGTGCTT
GATGAAGTGGCAAGATAGTCCCTGTCCTGTGTGTCGGTTCCACCACAACA
ATGCGAGCGAGGCGTCTACTTGTCAGTTTACGCCCGTGGCGAGGTCTTCG
CTTACGGGCGGCGCCGGCGCCGGCGCCGCCACTGTTGATACAAGTGTTGG
TGTTGGTGTTGTTAGTTCGTCTGCGTCGGGGGTGGGGGTGGGGATGAAAG
CTGCGGAGGTTGCCGCTGCTTCCGCGTTGGAGCATGACGCGGCGACTTGC
GTAATTTGCATGGATAGGATGGAGTCGCAGGTGCTGACTACTGTCTGCAA
CCATAGCTTCCACGTGGAGTGCTTGATGAAGTGGCAAGATAGTCCCTGTC
CTGTGTGTCGGTTCCACCACAACAATGCGAGCGAGGCGTCTACTTGTCAG
GAATGCCAGGCGACGGACAATGTGTGGGTTTGCTTGATCTGCGGCAGCGT
ACTGTGCGGCTCTCGACACGAGGACCACGTGCGGTTGCACTACACCAACA
CCTTGCACGCCTACGCTCTAGAAATAGAATGCCAGGCGACGGACAATGTG
TGGGTTTGCTTGATCTGCGGCAGCGTACTGTGCGGCTCTCGACACGAGGA
CCACGTGCGGTTGCACTACACCAACACCTTGCACGCCTACGCTCTAGAAA
TA
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