mRNA_H-paniculata_contig20856.5423.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig20856.5423.1 vs. uniprot
Match: D8LQ98_ECTSI (Cilia- and flagella-associated protein 53 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ98_ECTSI) HSP 1 Score: 276 bits (706), Expect = 5.160e-88 Identity = 159/198 (80.30%), Postives = 183/198 (92.42%), Query Frame = 1
Query: 1 QVAYNADRRRQLWEQTARDDLRELTELRALIKAEEAKAEARRIEAHRRGAEVRDFNEARRELRALEAKEAREQDLALLEYAIEKDKAGEAEEKAKRQEEKRVLRQYSEYLHEQMAKEAKDEAQYDEIRRQAETRIWDQRDAQLKAQHDARESLKQQQVHLGRQEQIRLKKLREQDQLAADLEQARLDRENFLAEEERE 594
QVAYNADRRRQLWEQTARDDL+EL ELRA+++AE+ KAEA++ EAH RGAEVRDFNEARRE+R + A++AREQDL LL+YAIEKDKAGEAEEKAK++EE+RVLRQY+EYL EQMAKEA DEAQYDEIR++AETRIWDQRDAQLKAQ+DARE+L +Q VH GRQEQIRLK LR+ +QLA DLEQARLDRE+FLAEEERE
Sbjct: 218 QVAYNADRRRQLWEQTARDDLKELNELRAIVRAEQEKAEAKKKEAHARGAEVRDFNEARREMRVVAAEQAREQDLVLLDYAIEKDKAGEAEEKAKKEEEQRVLRQYNEYLKEQMAKEAADEAQYDEIRQEAETRIWDQRDAQLKAQNDAREALMKQ-VHRGRQEQIRLKALRDDEQLATDLEQARLDRESFLAEEERE 414
BLAST of mRNA_H-paniculata_contig20856.5423.1 vs. uniprot
Match: A0A7S1XRQ7_9STRA (Cilia- and flagella-associated protein 53 n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XRQ7_9STRA) HSP 1 Score: 117 bits (294), Expect = 2.090e-27 Identity = 87/187 (46.52%), Postives = 119/187 (63.64%), Query Frame = 1
Query: 1 QVAYNADRRRQLWEQTARDDLRELTELRALIKAEEAKAEARRIEAHRRGAEVRDFNEARRELRALEAKEAREQDLALLEYAIEKDKAGEAEEKAKRQEEKRVLRQYSEYLHEQMAKEAKDEAQYDEIRRQAETRIWDQRDAQLKAQHDARESLKQQQVHLGRQEQIRLKKLREQDQLAADLEQARLD 561
QV +RR QL E +D ELTEL A I+ +E + R EAH RG EVR FNEAR +R A R+QDL LL+Y +E+++ AEE+AKRQ E R+Y+E+L E M KEA+D+++ D IR + E R+W++RDA+L+AQ +AR L + VH GRQEQI+ K+ R+ + EQ R D
Sbjct: 214 QVRIKGERRLQLIESMRKDAEEELTELAAAIQRDEDEQRRRTEEAHARGREVRAFNEARLNMRQERAALERQQDLLLLQYGMEQERKRIAEEQAKRQLEINATREYTEHLKELMIKEAQDDSEVDAIREREENRVWEKRDAELRAQTEARRRLMEI-VHAGRQEQIKAKRERDAIDRILEEEQERND 399
BLAST of mRNA_H-paniculata_contig20856.5423.1 vs. uniprot
Match: A0A835YTH0_9STRA (Cilia- and flagella-associated protein 53 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTH0_9STRA) HSP 1 Score: 100 bits (249), Expect = 3.780e-21 Identity = 82/206 (39.81%), Postives = 118/206 (57.28%), Query Frame = 1
Query: 1 QVAYNADRRRQLWEQTARDDLRELTELRALIKAEEAKAEARRIEAHRRGAEVRDFNEARRELRALEAKEAREQDLALLEYAIEKDKAGEAEEKAKRQEEKRVLRQYSEYLHEQMAKEAKDEAQYDEIRRQAETRIWDQRDAQLKAQHDARESLKQQQVHLGRQEQIRLKKLREQDQLAADLEQARLDRENFLAEEEREREKAMCRR 618
QV YNA RR L +++A +D EL ELRA++ AEE LR A +++D+ALL+YA+++++AGEAEE KR E+ +RQY+ YL QM +EA+D + D + AET++W+ R+A+ + DAR +L Q VH RQEQIR ++L + + AA EQA DRE F E +E +K RR
Sbjct: 219 QVRYNAARRMALEQRSAEEDRLELDELRAIVAAEEQXXXXXXXXXXXXXXXXXXXXXXXXXLREEAAALEQQRDMALLKYAVDRERAGEAEEHRKRDAEREAMRQYTAYLKAQMEREAEDAGKLDTAQADAETKMWEAREAEQAKRADARRALMAQ-VHAARQEQIRARRLADAAERAALNEQAAFDREAFARAEAQEADKERERR 423
BLAST of mRNA_H-paniculata_contig20856.5423.1 vs. uniprot
Match: A0A7S3YAB2_HETAK (Cilia- and flagella-associated protein 53 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YAB2_HETAK) HSP 1 Score: 92.0 bits (227), Expect = 3.690e-18 Identity = 78/184 (42.39%), Postives = 103/184 (55.98%), Query Frame = 1
Query: 1 QVAYNADRRRQLWEQTARDDLRELTELRALIKAEEAKAEARRIEAHRRGAEVRDFNEARRELRALEAKEAREQDLALLEYAIEKDKAGEAEEKAKRQEEKRVLRQYSEYLHEQMAKEAKDEAQYDEIRRQAETRIWDQRDAQLKAQHDARESLKQQQVHLGRQEQIRLKKLREQDQLAADLEQA 552
QVA NA+RR L AR D E+ GA VR+FN+A+ R + R +DL LLE+A + G+AEE+ KR EEKRV+R+Y YL EQM KEA+DE+ + R + E RIWDQR+A L+AQ DAR L Q V GR+EQ+ LK L +++ D E+A
Sbjct: 215 QVAKNAERRSALAAARARGDQEEIXXXXXXXXXXXXXXXXXXXXLVAAGAAVREFNQAKAAERGRAKELERGRDLLLLEHAQRMEARGQAEEERKRAEEKRVMREYHAYLQEQMVKEAEDESAIEAHRLREENRIWDQREADLRAQADARARLMGQ-VKAGREEQVYLKGLAAEEERKRDQEEA 397
BLAST of mRNA_H-paniculata_contig20856.5423.1 vs. uniprot
Match: A0A7S2STN1_9STRA (Cilia- and flagella-associated protein 53 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2STN1_9STRA) HSP 1 Score: 89.4 bits (220), Expect = 4.590e-18 Identity = 71/173 (41.04%), Postives = 106/173 (61.27%), Query Frame = 1
Query: 67 ELTELRALIKAEEAKAEARRIEAHRRGAEVRDFNEARRELRALEAKEAREQDLALLEYAIEKDKAGEAEEKAKRQEEKRVLRQYSEYLHEQMAKEAKDEAQYDEIRRQAETRIWDQRDAQLKAQHDARESLKQQQVHLGRQEQIRLKKLREQDQLAADLEQARLDRENFLAEE 585
ELTELRA I +E +A+ + A +RG + R FNE+R +R A R++DL LL+YA++K++A E K++EE+ ++Y EYL QM KEA+D A D +R+ E R W +R+A+ K + DAR +L Q + GRQ QIR + RE +LE+ R D + F A++
Sbjct: 15 ELTELRAAIARDEQEAQRHLLSAKQRGKQTRHFNESRLHIRQEAADRERQEDLVLLKYAMDKERAEIDAELRKKREEQETTKRYQEYLRAQMIKEAQDTALADSLRKADEDRNWAKREAEQKRRDDARANLMQV-TNDGRQRQIRERLERE----TKELEEDRGDGQRFAADQ 182
BLAST of mRNA_H-paniculata_contig20856.5423.1 vs. uniprot
Match: A0A7S0GFB1_9STRA (Cilia- and flagella-associated protein 53 n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GFB1_9STRA) HSP 1 Score: 73.6 bits (179), Expect = 9.470e-12 Identity = 54/130 (41.54%), Postives = 82/130 (63.08%), Query Frame = 1
Query: 211 REQDLALLEYAIEKDKAGEAEEKAKRQEEKRVLRQYSEYLHEQMAKEAKDEAQYDEIRRQAETRIWDQRDAQLKAQHDARESLKQQQVHLGRQEQIRLKKLREQDQLAADLEQARLDRENFLAEEERERE 600
RE DL LL+YA++K+ K+K++ EK++ R+Y +L +QM KE + + D+IR +IW +RD L+AQ DAR +L ++ V GRQEQ+R+K L E+++ A EQAR + EEE ER+
Sbjct: 252 RENDLVLLKYALKKESDSTDCNKSKKENEKKLSREYEAFLKDQMQKEKDENLKVDDIRATEMEKIWVKRDEALQAQADARGNLLKE-VQKGRQEQMRIKILVEEEEKEASAEQARFVAQKLKVEEENERD 380
BLAST of mRNA_H-paniculata_contig20856.5423.1 vs. uniprot
Match: A0A812P941_SYMMI (Cilia- and flagella-associated protein 53 n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812P941_SYMMI) HSP 1 Score: 69.3 bits (168), Expect = 2.820e-10 Identity = 51/145 (35.17%), Postives = 78/145 (53.79%), Query Frame = 1
Query: 1 QVAYNADRRRQLWEQTARDDLRELTELRALIKAEEAKAEARRIEAHRRGAEVRDFNEARRELRALEAKEAREQDLALLEYAIEKDKAGEAEEKAKRQEEKRVLRQYSEYLHEQMAKEAKDEAQYDEIRRQAETRIWDQRDAQLKA 435
Q+ +N ++ L + ++R + EE R EA+RRG E+ N A +E+ E + + QDLALL +A+ K+K +A E+AKR ++ R+Y +YL EQM +D A DEIRR+ E ++W RD L A
Sbjct: 213 QIEFNKKKKSDLRQTAQXXXXXXXQQIRDALAEEEMLQRQRHEEAYRRGKEILTTNAAVKEIEETEKQVRKAQDLALLRFALAKEKEAQAAEEAKRHANRQAAREYKKYLEEQMXXXXEDTAGLDEIRRKEEEKVWKARDDALNA 357
BLAST of mRNA_H-paniculata_contig20856.5423.1 vs. uniprot
Match: A0A6G0XRX0_9STRA (Cilia- and flagella-associated protein 53 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XRX0_9STRA) HSP 1 Score: 67.4 bits (163), Expect = 1.280e-9 Identity = 56/161 (34.78%), Postives = 94/161 (58.39%), Query Frame = 1
Query: 142 RGAEVRDFNEARRELRALEAKEAREQDLALLEYAIEKDKAGEAEEKAKRQEEKRVLRQYSEYLHEQMAKEAKDEAQYDEIRRQAETRIWDQRDAQLKAQHDARESLKQQQVHLGRQEQIRLKKLREQDQLAADLEQARLDRENF------LAEEEREREKA 606
R +V+ FN+ R E+ EA+ RE D LL+ A++K+ EA E+ +++ KR +Y L +QMA EA+D + D IR++ E +W +RDA+ +A+ DARE L Q V +++ +R ++++QD AR+ RE+ L E+E+ +E+A
Sbjct: 247 RATDVKKFNQKRAEMAEREARREREYDTQLLKLALQKEADTEARERQLQEKFKRDQLEYQAMLRQQMATEAEDLSYLDAIRKKMEDEVWAKRDAEHRAEQDAREELLAQVVQSRQEQIVRKGQIKQQDAANDAAYMARMQRESDEALQKELLEQEKRKEEA 407
BLAST of mRNA_H-paniculata_contig20856.5423.1 vs. uniprot
Match: A0A3L6VAJ6_9STRA (Cilia- and flagella-associated protein 53 (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6VAJ6_9STRA) HSP 1 Score: 63.2 bits (152), Expect = 4.350e-8 Identity = 54/144 (37.50%), Postives = 86/144 (59.72%), Query Frame = 1
Query: 142 RGAEVRDFNEARRELRALEAKEAREQDLALLEYAIEKDKAGEAEEKAKRQEEKRVLRQYSEYLHEQMAKEAKDEAQYDEIRRQAETRIWDQRDAQLKAQHDARESLKQQQVHLGRQEQIRLKKLREQDQLAADLE-QARLDREN 570
R +V+ FN+ R +L +A+ E D LL+ A+ ++ +A E+A +++ KR +Y L +QMA EA+D + D IR++ E +W +RDA+ +A+ DARE L Q V RQ+Q+ K+LR+ AAD AR+ RE+
Sbjct: 821 RAMDVKKFNQTRSDLTERQARREHEYDTQLLQLALRQEADTDARERALQEKFKRDQLEYQAMLRKQMATEAEDLSYLDAIRKKMEDEVWAKRDAEHRAEDDAREELLAQ-VLQSRQDQMERKELRKAADAAADAAYMARMQRES 963
BLAST of mRNA_H-paniculata_contig20856.5423.1 vs. uniprot
Match: W4FWZ1_9STRA (Cilia- and flagella-associated protein 53 n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FWZ1_9STRA) HSP 1 Score: 62.4 bits (150), Expect = 6.840e-8 Identity = 53/144 (36.81%), Postives = 86/144 (59.72%), Query Frame = 1
Query: 142 RGAEVRDFNEARRELRALEAKEAREQDLALLEYAIEKDKAGEAEEKAKRQEEKRVLRQYSEYLHEQMAKEAKDEAQYDEIRRQAETRIWDQRDAQLKAQHDARESLKQQQVHLGRQEQIRLKKLREQDQLAADLE-QARLDREN 570
R +V+ FN+ R +L +A+ E D LL+ A+ ++ +A E+A +++ KR +Y L +QMA EA+D + D IR++ E +W +RDA+ +A+ DAR+ L Q V RQ+Q+ K+LR+ AAD AR+ RE+
Sbjct: 300 RAMDVKKFNQTRSDLTERQARREHEYDTQLLQLALRQEAETDARERALQEKFKRDQLEYQAMLRKQMATEAEDLSYLDAIRKKMEDEVWAKRDAEHRAEDDARQELLAQ-VLQSRQDQMERKELRKAADAAADAAYMARMQRES 442 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig20856.5423.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig20856.5423.1 >prot_H-paniculata_contig20856.5423.1 ID=prot_H-paniculata_contig20856.5423.1|Name=mRNA_H-paniculata_contig20856.5423.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=207bp QVAYNADRRRQLWEQTARDDLRELTELRALIKAEEAKAEARRIEAHRRGAback to top mRNA from alignment at H-paniculata_contig20856:138..4051+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig20856.5423.1 ID=mRNA_H-paniculata_contig20856.5423.1|Name=mRNA_H-paniculata_contig20856.5423.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3914bp|location=Sequence derived from alignment at H-paniculata_contig20856:138..4051+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig20856:138..4051+ >mRNA_H-paniculata_contig20856.5423.1 ID=mRNA_H-paniculata_contig20856.5423.1|Name=mRNA_H-paniculata_contig20856.5423.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1242bp|location=Sequence derived from alignment at H-paniculata_contig20856:138..4051+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |