prot_H-paniculata_contig2083.5416.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2083.5416.1
Unique Nameprot_H-paniculata_contig2083.5416.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length103
Homology
BLAST of mRNA_H-paniculata_contig2083.5416.1 vs. uniprot
Match: A0A6H5K0X6_9PHAE (ApaG domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0X6_9PHAE)

HSP 1 Score: 124 bits (311), Expect = 6.930e-31
Identity = 60/104 (57.69%), Postives = 69/104 (66.35%), Query Frame = 0
Query:    1 MVSCQLSTRHWEIDSSDGLHREVSGDGVIGLYPLLRIPESSPGPME--HNLEPFEYQSCTGIESPPGTMGGRFTFIPGTKEHPTGRPFDARVPHFTLAVPKFIF 102
            M SCQLSTRHWEID  DG HREVSGDGVIG++P LR+P    G +    N   FEYQS T +E  PGTMGG F+F PG    P G  F+ARVP F L  P F++
Sbjct:  768 MSSCQLSTRHWEIDGPDGFHREVSGDGVIGVHPTLRVPAPPAGDVRGGDNGGVFEYQSITTLERTPGTMGGHFSFTPGDLNSPRGAQFNARVPTFHLEEPTFLY 871          
BLAST of mRNA_H-paniculata_contig2083.5416.1 vs. uniprot
Match: D7G3M2_ECTSI (Similar to F-box-containing protein 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3M2_ECTSI)

HSP 1 Score: 118 bits (296), Expect = 3.600e-29
Identity = 61/111 (54.95%), Postives = 70/111 (63.06%), Query Frame = 0
Query:    1 MVSCQLSTRHWEIDSSDGLHREVSGDGVIGLYPLLRIPESSPGPM--EHNLEPFEYQSCTGIE-------SPPGTMGGRFTFIPGTKEHPTGRPFDARVPHFTLAVPKFIF 102
            M SCQLSTRHWEID  DG HREVSGDGVIG++P LR+   S G +  E N   FEYQS T +E       SP GTMGG F+F P     P G  F+ARVP F L  P F++
Sbjct:  404 MSSCQLSTRHWEIDGPDGFHREVSGDGVIGMHPTLRVAAPSAGDVRGEENAGFFEYQSITTLERTPADHPSPAGTMGGHFSFTPRDLNSPRGAQFNARVPTFHLVEPTFLY 514          
BLAST of mRNA_H-paniculata_contig2083.5416.1 vs. uniprot
Match: A0A2I0BFX7_9ASPA (F-box protein SKIP16 n=1 Tax=Apostasia shenzhenica TaxID=1088818 RepID=A0A2I0BFX7_9ASPA)

HSP 1 Score: 95.9 bits (237), Expect = 4.400e-21
Identity = 48/100 (48.00%), Postives = 59/100 (59.00%), Query Frame = 0
Query:    3 SCQLSTRHWEIDSSDGLHREVSGDGVIGLYPLLRIPESSPGPMEHNLEPFEYQSCTGIESPPGTMGGRFTFIPGTKEHPTGRPFDARVPHFTLAVPKFIF 102
            SCQLS+RHW I S D +  +VSGDGVIG YPLL+           N E F Y+SCT +   PG++ G FTF+PG   H  G  FD +V  F L  P +IF
Sbjct:  358 SCQLSSRHWIIKSKDYVIDDVSGDGVIGKYPLLKP----------NQEEFVYESCTDLPEAPGSIEGSFTFVPGRLGHQEGAGFDVKVAPFLLPFPDYIF 447          
BLAST of mRNA_H-paniculata_contig2083.5416.1 vs. uniprot
Match: A0A835A2M5_9POAL (ApaG domain-containing protein n=2 Tax=Digitaria exilis TaxID=1010633 RepID=A0A835A2M5_9POAL)

HSP 1 Score: 94.0 bits (232), Expect = 2.030e-20
Identity = 47/100 (47.00%), Postives = 62/100 (62.00%), Query Frame = 0
Query:    3 SCQLSTRHWEIDSSDGLHREVSGDGVIGLYPLLRIPESSPGPMEHNLEPFEYQSCTGIESPPGTMGGRFTFIPGTKEHPTGRPFDARVPHFTLAVPKFIF 102
            SCQL +RHW I S D +  +VSG+GVIG YP+L     SPG  E     F Y+SCT +   PG++ G F+F+PG    P G+PF+  V  F L VP++IF
Sbjct:  344 SCQLHSRHWTIRSRDIVVSDVSGEGVIGQYPVL-----SPGQDE-----FVYESCTPLPKAPGSVEGSFSFVPGKLSRPEGKPFEVMVAPFPLEVPEYIF 433          
BLAST of mRNA_H-paniculata_contig2083.5416.1 vs. uniprot
Match: K3ZIF4_SETIT (ApaG domain-containing protein n=4 Tax=Setaria TaxID=4554 RepID=K3ZIF4_SETIT)

HSP 1 Score: 92.4 bits (228), Expect = 8.070e-20
Identity = 47/100 (47.00%), Postives = 61/100 (61.00%), Query Frame = 0
Query:    3 SCQLSTRHWEIDSSDGLHREVSGDGVIGLYPLLRIPESSPGPMEHNLEPFEYQSCTGIESPPGTMGGRFTFIPGTKEHPTGRPFDARVPHFTLAVPKFIF 102
            SCQL +RHW I S D +   VSG+GVIG YP+L     SPG  E     F Y+SCT +   PG++ G F+F+PG    P G+PF+  V  F L VP++IF
Sbjct:  363 SCQLHSRHWTIRSRDRVVSVVSGEGVIGQYPVL-----SPGRDE-----FVYESCTPLPKGPGSVEGSFSFVPGKLSRPEGKPFEVTVAPFPLEVPEYIF 452          
BLAST of mRNA_H-paniculata_contig2083.5416.1 vs. uniprot
Match: UPI001263912A (F-box protein SKIP16-like n=1 Tax=Pistacia vera TaxID=55513 RepID=UPI001263912A)

HSP 1 Score: 92.4 bits (228), Expect = 9.850e-20
Identity = 45/100 (45.00%), Postives = 62/100 (62.00%), Query Frame = 0
Query:    3 SCQLSTRHWEIDSSDGLHREVSGDGVIGLYPLLRIPESSPGPMEHNLEPFEYQSCTGIESPPGTMGGRFTFIPGTKEHPTGRPFDARVPHFTLAVPKFIF 102
            SCQL  RHW I ++D +  ++SG+ VIG++PLLR     PG  E     F Y+SCT + +  G++ G FTF+PG    P GRPF+A V  F+L  P +IF
Sbjct:  430 SCQLHQRHWVIRANDVVVSDISGEAVIGMFPLLR-----PGEKE-----FVYESCTPLPTSSGSVKGSFTFVPGRLADPKGRPFEAEVAEFSLRCPDYIF 519          
BLAST of mRNA_H-paniculata_contig2083.5416.1 vs. uniprot
Match: A0A1S3TL19_VIGRR (F-box protein SKIP16 n=6 Tax=Vigna TaxID=3913 RepID=A0A1S3TL19_VIGRR)

HSP 1 Score: 92.0 bits (227), Expect = 1.070e-19
Identity = 48/100 (48.00%), Postives = 61/100 (61.00%), Query Frame = 0
Query:    3 SCQLSTRHWEIDSSDGLHREVSGDGVIGLYPLLRIPESSPGPMEHNLEPFEYQSCTGIESPPGTMGGRFTFIPGTKEHPTGRPFDARVPHFTLAVPKFIF 102
            SCQL  RHW I ++D +  +VSG+ VIG YPLL      PG  E     F YQSCT + +P G++ G FTFIPG+  +P G PF A V  F L +P +IF
Sbjct:  354 SCQLHWRHWIIRANDDVVSDVSGEAVIGQYPLLH-----PGGQE-----FVYQSCTPLPTPSGSIEGSFTFIPGSLAYPKGDPFLATVAQFPLQLPDYIF 443          
BLAST of mRNA_H-paniculata_contig2083.5416.1 vs. uniprot
Match: A0A835VKE9_VANPL (Uncharacterized protein n=2 Tax=Vanilla planifolia TaxID=51239 RepID=A0A835VKE9_VANPL)

HSP 1 Score: 92.0 bits (227), Expect = 1.130e-19
Identity = 46/100 (46.00%), Postives = 58/100 (58.00%), Query Frame = 0
Query:    3 SCQLSTRHWEIDSSDGLHREVSGDGVIGLYPLLRIPESSPGPMEHNLEPFEYQSCTGIESPPGTMGGRFTFIPGTKEHPTGRPFDARVPHFTLAVPKFIF 102
            SCQLS RHW I S D +  +V+G GVIGLYP L  P+S           F Y+SCT +   PG + G FTF+PG+   P G  F+  V  F L VP++IF
Sbjct:  367 SCQLSLRHWNIKSKDNVVADVTGGGVIGLYPHL-TPDS---------REFVYESCTSVPEVPGVVAGSFTFVPGSLMRPEGPAFEVEVAPFILEVPEYIF 456          
BLAST of mRNA_H-paniculata_contig2083.5416.1 vs. uniprot
Match: A0A328DWL2_9ASTE (ApaG domain-containing protein n=2 Tax=Cuscuta sect. Cleistogrammica TaxID=1824901 RepID=A0A328DWL2_9ASTE)

HSP 1 Score: 91.7 bits (226), Expect = 1.480e-19
Identity = 46/100 (46.00%), Postives = 60/100 (60.00%), Query Frame = 0
Query:    3 SCQLSTRHWEIDSSDGLHREVSGDGVIGLYPLLRIPESSPGPMEHNLEPFEYQSCTGIESPPGTMGGRFTFIPGTKEHPTGRPFDARVPHFTLAVPKFIF 102
            SCQL  RHW I  +D +  +VSG+GVIG YP+L      PG  E     F Y+SCT + SP G++ G FTF+PG    P G PF+ +V  F L +P +IF
Sbjct:  355 SCQLYRRHWIIRVNDSIVDDVSGEGVIGKYPILL-----PGEEE-----FVYESCTQLSSPSGSIEGLFTFVPGCLADPKGSPFEVKVARFPLQLPDYIF 444          
BLAST of mRNA_H-paniculata_contig2083.5416.1 vs. uniprot
Match: A0A484M3W1_9ASTE (ApaG domain-containing protein n=1 Tax=Cuscuta campestris TaxID=132261 RepID=A0A484M3W1_9ASTE)

HSP 1 Score: 90.5 bits (223), Expect = 1.850e-19
Identity = 46/100 (46.00%), Postives = 59/100 (59.00%), Query Frame = 0
Query:    3 SCQLSTRHWEIDSSDGLHREVSGDGVIGLYPLLRIPESSPGPMEHNLEPFEYQSCTGIESPPGTMGGRFTFIPGTKEHPTGRPFDARVPHFTLAVPKFIF 102
            SCQL  RHW I   D +  +VSG+GVIG +PLL      PG  E     F Y+SCT + SP G++ G FTF+PG    P G PF+ +V  F L +P +IF
Sbjct:  254 SCQLYRRHWIIRVDDSIVDDVSGEGVIGKFPLLL-----PGEEE-----FVYESCTQLSSPSGSIEGLFTFVPGCLADPKGSPFEVKVARFPLQLPDYIF 343          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2083.5416.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K0X6_9PHAE6.930e-3157.69ApaG domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7G3M2_ECTSI3.600e-2954.95Similar to F-box-containing protein 2 n=1 Tax=Ecto... [more]
A0A2I0BFX7_9ASPA4.400e-2148.00F-box protein SKIP16 n=1 Tax=Apostasia shenzhenica... [more]
A0A835A2M5_9POAL2.030e-2047.00ApaG domain-containing protein n=2 Tax=Digitaria e... [more]
K3ZIF4_SETIT8.070e-2047.00ApaG domain-containing protein n=4 Tax=Setaria Tax... [more]
UPI001263912A9.850e-2045.00F-box protein SKIP16-like n=1 Tax=Pistacia vera Ta... [more]
A0A1S3TL19_VIGRR1.070e-1948.00F-box protein SKIP16 n=6 Tax=Vigna TaxID=3913 RepI... [more]
A0A835VKE9_VANPL1.130e-1946.00Uncharacterized protein n=2 Tax=Vanilla planifolia... [more]
A0A328DWL2_9ASTE1.480e-1946.00ApaG domain-containing protein n=2 Tax=Cuscuta sec... [more]
A0A484M3W1_9ASTE1.850e-1946.00ApaG domain-containing protein n=1 Tax=Cuscuta cam... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007474ApaG domainPFAMPF04379DUF525coord: 3..74
e-value: 2.1E-14
score: 53.5
IPR007474ApaG domainPROSITEPS51087APAGcoord: 1..102
score: 23.478
IPR036767ApaG domain superfamilyGENE3D2.60.40.1470coord: 1..101
e-value: 1.1E-21
score: 78.7
IPR036767ApaG domain superfamilySUPERFAMILY110069ApaG-likecoord: 2..101
NoneNo IPR availablePANTHERPTHR47463FAMILY NOT NAMEDcoord: 2..102

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2083contigH-paniculata_contig2083:9783..20273 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2083.5416.1mRNA_H-paniculata_contig2083.5416.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2083 9299..21540 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2083.5416.1 ID=prot_H-paniculata_contig2083.5416.1|Name=mRNA_H-paniculata_contig2083.5416.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=103bp
MVSCQLSTRHWEIDSSDGLHREVSGDGVIGLYPLLRIPESSPGPMEHNLE
PFEYQSCTGIESPPGTMGGRFTFIPGTKEHPTGRPFDARVPHFTLAVPKF
IF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007474ApaG_domain
IPR036767ApaG_sf