prot_H-paniculata_contig2076.5394.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig2076.5394.1
Unique Name	prot_H-paniculata_contig2076.5394.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	93

Homology

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BLAST of mRNA_H-paniculata_contig2076.5394.1 vs. uniprot
Match: A0A6H5KX83_9PHAE (Lipase_3 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX83_9PHAE)

HSP 1 Score: 101 bits (252), Expect = 4.290e-23
Identity = 50/90 (55.56%), Postives = 65/90 (72.22%), Query Frame = 0

Query:    1 MPTLVFRERRLLLGGDEFMVPYASVAIGRTLWVVFLVVTLIVSGSYMFDAQCTDAGYAAFFYEVVSITVGVISIIVEFRIAVVSTYGTII 90
            MP LVFR+RRLLLGGDE M+PYA+ A GR +W+VFL+V L ++   +    C D GY  F YE +SI  GV+S++VE +IA  +TYGTII
Sbjct:    1 MPGLVFRQRRLLLGGDELMLPYATSACGRAVWMVFLLVGLALASGMLLGGDCHDVGYVVFVYEALSIVAGVLSLVVECQIAKAATYGTII 90

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig2076.5394.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig2076.5394.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A6H5KX83_9PHAE	4.290e-23	55.56	Lipase_3 domain-containing protein (Fragment) n=1 ...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..19
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 60..82
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 20..48
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 83..92
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 49..59
None	No IPR available	TMHMM	TMhelix		coord: 20..42
None	No IPR available	TMHMM	TMhelix		coord: 57..76

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig2076	contig	H-paniculata_contig2076:15214..19716 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig2076.5394.1	mRNA_H-paniculata_contig2076.5394.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig2076 15214..19716 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig2076.5394.1 ID=prot_H-paniculata_contig2076.5394.1|Name=mRNA_H-paniculata_contig2076.5394.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=93bp
MPTLVFRERRLLLGGDEFMVPYASVAIGRTLWVVFLVVTLIVSGSYMFDA
QCTDAGYAAFFYEVVSITVGVISIIVEFRIAVVSTYGTIIGM*