mRNA_H-paniculata_contig20746.5387.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig20746.5387.1 vs. uniprot
Match: D8LKP4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKP4_ECTSI) HSP 1 Score: 84.7 bits (208), Expect = 5.820e-18 Identity = 39/58 (67.24%), Postives = 48/58 (82.76%), Query Frame = 1
Query: 4 TALELGAGTGVCGLTAAIAIGCPVLLTDRRCDVLENLRANVVLNGLEDRVQVVRLAWG 177
T LELGAGTGVCG+TA++++GC V+LTDRR D+LENLR N+ LNGL R +V RL WG
Sbjct: 149 TVLELGAGTGVCGMTASLSLGCSVVLTDRRSDILENLRININLNGLATRARVARLEWG 206
BLAST of mRNA_H-paniculata_contig20746.5387.1 vs. uniprot
Match: A0A6H5KU26_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU26_9PHAE) HSP 1 Score: 84.3 bits (207), Expect = 1.240e-17 Identity = 39/58 (67.24%), Postives = 48/58 (82.76%), Query Frame = 1
Query: 4 TALELGAGTGVCGLTAAIAIGCPVLLTDRRCDVLENLRANVVLNGLEDRVQVVRLAWG 177
T LELGAGTGVCG+ A++++GC V+LTDRR D+LENLR N+ LNGL R +VVRL WG
Sbjct: 183 TVLELGAGTGVCGMAASLSLGCSVVLTDRRSDILENLRKNINLNGLATRARVVRLEWG 240
BLAST of mRNA_H-paniculata_contig20746.5387.1 vs. uniprot
Match: A0A836CN38_9STRA (Putative methyltransferase-domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN38_9STRA) HSP 1 Score: 59.7 bits (143), Expect = 2.320e-9 Identity = 33/55 (60.00%), Postives = 35/55 (63.64%), Query Frame = 1
Query: 10 LELGAGTGVCGLTAAIAIGCPVLLTDRRCDVLENLRANVVLNGLEDRVQVVRLAW 174
+ELGAGTG CGL AA G LLTD L LRANV LNG+E QV RLAW
Sbjct: 45 IELGAGTGACGLLAAKLCGIRTLLTDGEEGALHQLRANVRLNGVEGTTQVQRLAW 99
BLAST of mRNA_H-paniculata_contig20746.5387.1 vs. uniprot
Match: A0A843UVG8_COLES (Uncharacterized protein n=1 Tax=Colocasia esculenta TaxID=4460 RepID=A0A843UVG8_COLES) HSP 1 Score: 57.4 bits (137), Expect = 3.590e-8 Identity = 32/58 (55.17%), Postives = 40/58 (68.97%), Query Frame = 1
Query: 4 TALELGAGTGVCGLTAAIAIGCPVLLTDRRCDVLENLRANVVLNGLEDRVQVVRLAWG 177
T LELGAGTG+ GLTAA+ V+LTD+ +L LR N +NGL DRV+V L+WG
Sbjct: 164 TVLELGAGTGLPGLTAALLGAARVVLTDQ-APLLPGLRTNAAVNGLADRVEVRELSWG 220
BLAST of mRNA_H-paniculata_contig20746.5387.1 vs. uniprot
Match: UPI001FB0C3AB (protein N-lysine methyltransferase METTL21A-like n=1 Tax=Impatiens glandulifera TaxID=253017 RepID=UPI001FB0C3AB) HSP 1 Score: 55.5 bits (132), Expect = 1.040e-7 Identity = 32/58 (55.17%), Postives = 38/58 (65.52%), Query Frame = 1
Query: 4 TALELGAGTGVCGLTAAIAIGCPVLLTDRRCDVLENLRANVVLNGLEDRVQVVRLAWG 177
T +ELGAGTG+ GLT AI V LTD ++ L NV +NGLEDRV+V RL WG
Sbjct: 60 TVIELGAGTGLPGLTTAILGASHVFLTDVE-SLIPTLNKNVEVNGLEDRVKVSRLVWG 116
BLAST of mRNA_H-paniculata_contig20746.5387.1 vs. uniprot
Match: UPI00103616CD (protein N-lysine methyltransferase METTL21A-like n=1 Tax=Camellia sinensis TaxID=4442 RepID=UPI00103616CD) HSP 1 Score: 54.7 bits (130), Expect = 2.170e-7 Identity = 34/58 (58.62%), Postives = 38/58 (65.52%), Query Frame = 1
Query: 4 TALELGAGTGVCGLTAAIAIGCPVLLTDRRCDVLENLRANVVLNGLEDRVQVVRLAWG 177
T LELGAGTG+ GLTAA V+LTD +L LR NV NGL DRV+V RL WG
Sbjct: 60 TVLELGAGTGLPGLTAAALGASRVILTDVE-PLLPVLRKNVEANGLGDRVEVSRLVWG 116
BLAST of mRNA_H-paniculata_contig20746.5387.1 vs. uniprot
Match: A0A4S4E420_CAMSI (Uncharacterized protein n=1 Tax=Camellia sinensis var. sinensis TaxID=542762 RepID=A0A4S4E420_CAMSI) HSP 1 Score: 54.7 bits (130), Expect = 3.320e-7 Identity = 34/58 (58.62%), Postives = 38/58 (65.52%), Query Frame = 1
Query: 4 TALELGAGTGVCGLTAAIAIGCPVLLTDRRCDVLENLRANVVLNGLEDRVQVVRLAWG 177
T LELGAGTG+ GLTAA V+LTD +L LR NV NGL DRV+V RL WG
Sbjct: 162 TVLELGAGTGLPGLTAAALGASRVILTDVE-PLLPVLRKNVEANGLGDRVEVSRLVWG 218
BLAST of mRNA_H-paniculata_contig20746.5387.1 vs. uniprot
Match: UPI001CC6DDCD (protein N-lysine methyltransferase METTL21A-like n=1 Tax=Telopea speciosissima TaxID=54955 RepID=UPI001CC6DDCD) HSP 1 Score: 53.9 bits (128), Expect = 4.510e-7 Identity = 33/58 (56.90%), Postives = 38/58 (65.52%), Query Frame = 1
Query: 4 TALELGAGTGVCGLTAAIAIGCPVLLTDRRCDVLENLRANVVLNGLEDRVQVVRLAWG 177
T +ELGAGTG+ GLTAA+ V+LTD +L LR NV N LEDRVQV L WG
Sbjct: 60 TVVELGAGTGLPGLTAALLGANHVVLTDV-AQLLPGLRKNVEANALEDRVQVRELLWG 116
BLAST of mRNA_H-paniculata_contig20746.5387.1 vs. uniprot
Match: A0A8K0N5Q5_COCNU (Uncharacterized protein n=1 Tax=Cocos nucifera TaxID=13894 RepID=A0A8K0N5Q5_COCNU) HSP 1 Score: 53.5 bits (127), Expect = 5.390e-7 Identity = 32/58 (55.17%), Postives = 39/58 (67.24%), Query Frame = 1
Query: 4 TALELGAGTGVCGLTAAIAIGCPVLLTDRRCDVLENLRANVVLNGLEDRVQVVRLAWG 177
T LELGAGTG+ GL AA+ V+LTD +L LRANV +NGLE +V+V L WG
Sbjct: 60 TVLELGAGTGLPGLAAAVLGAARVVLTDVAL-LLPGLRANVEVNGLEGQVEVRELRWG 116
BLAST of mRNA_H-paniculata_contig20746.5387.1 vs. uniprot
Match: A0A5J5A4X8_9ASTE (Uncharacterized protein n=1 Tax=Nyssa sinensis TaxID=561372 RepID=A0A5J5A4X8_9ASTE) HSP 1 Score: 51.6 bits (122), Expect = 2.850e-6 Identity = 30/56 (53.57%), Postives = 38/56 (67.86%), Query Frame = 1
Query: 10 LELGAGTGVCGLTAAIAIGCPVLLTDRRCDVLENLRANVVLNGLEDRVQVVRLAWG 177
LELGAGTG+ GLTAA+ V+LTD ++ L+ NV NGL DRV+V +L WG
Sbjct: 49 LELGAGTGLPGLTAALLGASRVILTDVE-QLVPCLKKNVEANGLGDRVEVTQLVWG 103 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig20746.5387.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig20746.5387.1 >prot_H-paniculata_contig20746.5387.1 ID=prot_H-paniculata_contig20746.5387.1|Name=mRNA_H-paniculata_contig20746.5387.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=59bp ATALELGAGTGVCGLTAAIAIGCPVLLTDRRCDVLENLRANVVLNGLEDRback to top mRNA from alignment at H-paniculata_contig20746:2268..2444- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig20746.5387.1 ID=mRNA_H-paniculata_contig20746.5387.1|Name=mRNA_H-paniculata_contig20746.5387.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=177bp|location=Sequence derived from alignment at H-paniculata_contig20746:2268..2444- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig20746:2268..2444- >mRNA_H-paniculata_contig20746.5387.1 ID=mRNA_H-paniculata_contig20746.5387.1|Name=mRNA_H-paniculata_contig20746.5387.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=354bp|location=Sequence derived from alignment at H-paniculata_contig20746:2268..2444- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |