prot_H-paniculata_contig2073.5383.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2073.5383.1
Unique Nameprot_H-paniculata_contig2073.5383.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length462
Homology
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BLAST of mRNA_H-paniculata_contig2073.5383.1 vs. uniprot
Match: D7G5T8_ECTSI (Hypothetical leucine rich repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5T8_ECTSI)

HSP 1 Score: 225 bits (574), Expect = 4.000e-62
Identity = 157/301 (52.16%), Postives = 199/301 (66.11%), Query Frame = 0 
Query:   66 LPTFKEVKAHLRPILSIAEERH--LGS-KSVYLSHLIAGNTERRWTPSAGPPGPGDIAAAAKAAHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEAADLYATAKAFLKQNSEFQYIWVASACMPPHLREDKWLGAVPGVNGSNMFDHLHPGALLTCDAVLVTPPERESLPWLPRERERYTDLEVYSMSPWKALEGAVAQLVGTVTYYSFRLGDTLIFTGPFGPSPSQQPSATSSPLPGSHHTRRSASPTPTSAYGASGRRSGXXXXXXXXSDSPDPGGFTLGTPVSRARSVS 363
            +P+ +E K HLRP+LS+ +++   +GS K++YLSH    + E+RW P   PP    +  A+KAA XXXXXXXXXXXXXXXXXXXXXXXXXXX          GEAADLYATA+AFL +N EFQ+IWV++ACMPP LRE KW GAVP   GSNMF+HLHPGAL+ CDAVLV PPERES+ ++  +R RY+DLE+YS SPWKALEG + QL+ +V++Y+FRLG  LIF GP+   P +       P P     RR ++P   S  GA               DSP  G     +PV RA++ +
Sbjct:    1 MPSHEEAKPHLRPVLSLTDKKRYPMGSGKALYLSHSQGDHLEKRWVPG-DPPKTASVDVASKAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVIAKQASAAGEAADLYATARAFLMENPEFQHIWVSAACMPPRLREQKWRGAVPSAAGSNMFEHLHPGALVACDAVLVAPPERESMSYIAEQRARYSDLEMYSTSPWKALEGVIMQLMNSVSFYAFRLGKKLIFAGPYPAYPEE-------PQPSPLDLRRGSAPA--SIVGA---------------DSPVGGRMATESPVDRAKAAA 276
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2073.5383.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G5T8_ECTSI4.000e-6252.16Hypothetical leucine rich repeat protein n=2 Tax=E... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2073contigH-paniculata_contig2073:1590..16646 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2073.5383.1mRNA_H-paniculata_contig2073.5383.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2073 1583..22673 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2073.5383.1 ID=prot_H-paniculata_contig2073.5383.1|Name=mRNA_H-paniculata_contig2073.5383.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=462bp
MGNVQSLGDDGGFFHGEDSGERGRAREVKWTMAKRCVGLLEVSFPEAKLE
TVRLLPREILINHGHLPTFKEVKAHLRPILSIAEERHLGSKSVYLSHLIA
GNTERRWTPSAGPPGPGDIAAAAKAAHAAANAAGGAVAVAVAAAAAGAAQ
AAAGAAIAARASAAGEAADLYATAKAFLKQNSEFQYIWVASACMPPHLRE
DKWLGAVPGVNGSNMFDHLHPGALLTCDAVLVTPPERESLPWLPRERERY
TDLEVYSMSPWKALEGAVAQLVGTVTYYSFRLGDTLIFTGPFGPSPSQQP
SATSSPLPGSHHTRRSASPTPTSAYGASGRRSGSRTGSSAGSDSPDPGGF
TLGTPVSRARSVSATARGAARALLVRGWNGTTRWGKEQGFLGGGTGGGGE
NTAYYTDRGRQRRRRRVRRRRADDGGIAEWRGRGWSGPCRRRWIALARTG
RVHPQSEIGGA*
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