prot_H-paniculata_contig20716.5380.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig20716.5380.1
Unique Nameprot_H-paniculata_contig20716.5380.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length699
Homology
BLAST of mRNA_H-paniculata_contig20716.5380.1 vs. uniprot
Match: A0A6H5KJN3_9PHAE (Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJN3_9PHAE)

HSP 1 Score: 446 bits (1147), Expect = 3.730e-139
Identity = 260/558 (46.59%), Postives = 333/558 (59.68%), Query Frame = 0
Query:   39 STVSVMVDSGASGHYFDDTLIPGLRYKLFNYQELTVPRKITTAGGHQLAGVGQGLLRGHINDSEGVKRLVQISCLVVPGLGRNLFSVKQATRNGVVSIFDMNNPRLETNNFTVPLQELESD---LYFFSLEI----------TSGSGAPGLAMQAADTATLWHRRMGHLNRNSLNLLKTVDDNGVDFGGAVPDCDICAVGKSHQLAHPKTADNQVQRAFQLVMTDLMGPIMPEALGGFKYACKISDEYTRWTEIYLLKTKDGALHAFQSFIQSMVIPGGVRVERLRADKGGEFIGNDFRSYCRQTGVLLEFASTNTPQQIGMSERVGRTLAAMVRCMLADSGLPTFLWGELMFTAAYLANRAPHSALGMQSPHKMLKGTEPDLRHLRVIGARAFVHIERHTPKLALKAVEGRLVGYSNHSKSYRVYNPATRRIIESRNVVFIET---PPHLTPTGEPQLLIHPSSPSDSEGHNYATDDDFLRDLRDHTSVLAQPARVSVDHATASGVSSNPQVAELLERISTITRRDMLHDDATPREGT-------SPASPEGGEPPE 573
            S++ ++VDSGA+ +Y D  L PG+R  + + ++L +P  I TAG H L GV  G+L G + D  G  R V    ++VPGLG NLFSV  A  NGV S+F  +NPRLE+ +  VP++    D       S+ I          T G    GLA++  +TA LWHRRMGH+N  SL++L+    +G+D+ G V DC  C +GKS Q  HPK A   V   FQLV  D +GP  P ALGGFKYA K  D++T+W E+ L+K K  ++ A + F +  VIP   R+  LRADKG EF    +R YC   G+ L+FAS NTP QIG +ER GRT+  +VRCMLADS LP+ LWGELM TA YL+NR PH+AL   +P+K L GT+  L HLRV+GARAFVH E HT KL  +A EGRLVGYS  SKSYR+YN  TRR+ ESRNV+FIET   PP L   G            D     YA  DD +RD+R++T+        SVD  + +    +P V ELLE IST+  RD+  + A P           S ASP G  PPE
Sbjct:  416 SSILMLVDSGATDNYLDPALTPGVRAHMRDIEDLRIPLPIITAGQHVLHGVTTGVLFGTVTDDSGQDRQVSFRVVLVPGLGTNLFSVTAALSNGVASLFYPDNPRLESADAVVPMKIQGVDNTGKITCSITIKLGAENGGRQTPGETPDGLALRV-ETADLWHRRMGHINNKSLDVLRQQAASGIDYRGDVQDCSACPLGKSSQQPHPKHAVYGVSTPFQLVFVDTLGPFTPTALGGFKYATKFVDQHTKWKEVVLMKDKTCSIDALELFNKGTVIPRSARIHVLRADKGTEFTNAAYRQYCLDVGIQLQFASPNTPHQIGANERAGRTIMNIVRCMLADSTLPSLLWGELMQTAVYLSNRTPHAALHNGTPYKALFGTDAHLGHLRVVGARAFVHEETHTKKLDSRAWEGRLVGYSLDSKSYRIYNAQTRRVRESRNVIFIETTPAPPSLDERG-----------FDDGEFTYADHDDMIRDVRNYTT------NHSVDALSPTHAVGDPSVLELLEDISTVHNRDLGTNSADPAPAAEDAPADDSLASPGGVSPPE 955          
BLAST of mRNA_H-paniculata_contig20716.5380.1 vs. uniprot
Match: A0A6H5JYB5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYB5_9PHAE)

HSP 1 Score: 431 bits (1109), Expect = 2.080e-133
Identity = 255/559 (45.62%), Postives = 327/559 (58.50%), Query Frame = 0
Query:   39 STVSVMVDSGASGHYFDDTLIPGLRYKLFNYQELTVPRKITTAGGHQLAGVGQGLLRGHINDSEGVKRLVQISCLVVPGLGRNLFSVKQATRNGVVSIFDMNNPRLETNNFTVPLQELESD---LYFFSLEI----------TSGSGAPGLAMQAADTATLWHRRMGHLNRNSLNLLKTVDDNGVDFGGAVPDCDICAVGKSHQLAHPKTADNQVQRAFQLVMTDLMGPIMPEALGGFKYACKISDEYTRWTEIYLLKTKDG-ALHAFQSFIQSMVIPGGVRVERLRADKGGEFIGNDFRSYCRQTGVLLEFASTNTPQQIGMSERVGRTLAAMVRCMLADSGLPTFLWGELMFTAAYLANRAPHSALGMQSPHKMLKGTEPDLRHLRVIGARAFVHIERHTPKLALKAVEGRLVGYSNHSKSYRVYNPATRRIIESRNVVFIET---PPHLTPTGEPQLLIHPSSPSDSEGHNYATDDDFLRDLRDHTSVLAQPARVSVDHATASGVSSNPQVAELLERISTITRRDMLHDDATPREGT-------SPASPEGGEPPE 573
            S++ ++ DSGA+ +Y D  L PG+R  + + ++L +P  I TAG H L GV  G+L G + D  G  R V    ++VPGLG NLFSV  A  NGV S+F  +NPRLE+ +  VP++    D       S+ I          T G    GLA++  +TA LWHRRMGH+N  SL++L+    +G+D+ G V DC  C +GKS Q  HPK A   V   FQLV  D  GP     LGGFKYA K  D++T+W E+ L+K K   ++   + F +  VIP   R+  LRA KG EF    +R YC   G+ L+FAS NTP QIG +ER GRT+  +VRCMLADS LP+ LWGELM TA YL+NR PH+AL   +P+K L GT+  L HLRV+GARAFVH E HT KL  +A EGRLVGYS  SKSYR+YN  TRR+ ESRNV+FIET   PP L   G            D     YA  DD +RD+R++T+        SVD  + +    +P V ELLE IST+  RD+  + A P           S ASP G  PPE
Sbjct:  321 SSILMLEDSGATDNYLDPALTPGVRAHMRDIEDLRIPLPIITAGQHVLHGVTTGVLFGTVTDDSGQDRQVSFRVVLVPGLGTNLFSVTAALSNGVASLFYPDNPRLESADAVVPMKIQGVDNTGKITCSITIKLGAENGGRQTPGETPDGLALRV-ETADLWHRRMGHINNKSLDVLRQQAASGIDYRGDVQDCSACPLGKSSQQPHPKHAVYGVSTPFQLVFVDTFGPFTSTTLGGFKYATKFVDQHTKWKEVVLMKDKTSCSIDGLELFNKGTVIPRSARIHVLRAGKGAEFTNAAYRQYCLDVGIQLQFASPNTPHQIGANERAGRTIMNIVRCMLADSTLPSLLWGELMQTAVYLSNRTPHAALHNGTPYKALFGTDAHLGHLRVVGARAFVHEETHTKKLDSRAWEGRLVGYSLDSKSYRIYNAQTRRVRESRNVIFIETNPAPPSLDERG-----------FDDGEFTYADHDDMIRDVRNYTT------NHSVDALSPTHAVGDPSVLELLEDISTVHNRDLGTNSADPAPAAEDAPADDSLASPGGVSPPE 861          
BLAST of mRNA_H-paniculata_contig20716.5380.1 vs. uniprot
Match: A0A6H5J842_9PHAE (Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J842_9PHAE)

HSP 1 Score: 433 bits (1113), Expect = 2.420e-130
Identity = 246/518 (47.49%), Postives = 315/518 (60.81%), Query Frame = 0
Query:   39 STVSVMVDSGASGHYFDDTLIPGLRYKLFNYQELTVPRKITTAGGHQLAGVGQGLLRGHINDSEGVKRLVQISCLVVPGLGRNLFSVKQATRNGVVSIFDMNNPRLETNNFTVPLQELESD---LYFFSLEI----------TSGSGAPGLAMQAADTATLWHRRMGHLNRNSLNLLKTVDDNGVDFGGAVPDCDICAVGKSHQLAHPKTADNQVQRAFQLVMTDLMGPIMPEALGGFKYACKISDEYTRWTEIYLLKTKDGALHAFQSFIQSMVIPGGVRVERLRADKGGEFIGNDFRSYCRQTGVLLEFASTNTPQQIGMSERVGRTLAAMVRCMLADSGLPTFLWGELMFTAAYLANRAPHSALGMQSPHKMLKGTEPDLRHLRVIGARAFVHIERHTPKLALKAVEGRLVGYSNHSKSYRVYNPATRRIIESRNVVFIETPPHLTPTGEPQLLIHPSSPSDSEGHNYATDDDFLRDLRDHTSVLAQPARVSVDHATASGVSSNPQVAELLERIS 543
            S++ ++VDSGA+ +Y D  L PG+R  + + ++L +P  I TAG H L GV  G+L G + D  G  R V    ++VPGLG NLFSV  A  NGV S+F  +NPRLE+ +  VP++    D       S+ I          T G    GLA++  +TA LWHRRMGH+N  SL++L+    +G+D+ G V DC  C +GKS Q  HPK A   V   FQLV  D +GP  P ALGGFKYA K  D++T+W E+ L+K K  ++ A + F +  VIP   R+  LRADKG EF    +R YC   G+ L+FAS NTP QIG +ER GRT+  +VRCMLADS LP+ LWGELM TA YL+NR PH+AL   +P+K L GT+  L HLRV+GARAFVH E HT KL  +A EGRLVGYS  SKSYR+YN  TRR+ ESRNV+FIE      PT  P  L       D     YA  DD +RD+R++T+        SVD    +    +P V ELLE IS
Sbjct:  416 SSILMLVDSGATDNYLDPALTPGVRAHMRDIEDLRIPLPIITAGQHVLHGVTTGVLFGTVTDDSGQDRRVSFRVMLVPGLGNNLFSVTAALSNGVASLFYPDNPRLESADAVVPMKIQGVDNTGKITCSITIKLGAENGGRQTPGETPDGLALRV-ETADLWHRRMGHINNKSLDVLRQQAASGIDYRGDVQDCSACPLGKSSQQPHPKHAVYGVSTPFQLVFVDTLGPFTPTALGGFKYATKFVDQHTKWKEVVLMKDKTCSIDALELFNKGTVIPRSARIHVLRADKGTEFTNAAYRQYCLDVGIQLQFASPNTPHQIGANERAGRTIMNIVRCMLADSTLPSLLWGELMQTAVYLSNRTPHAALHNGTPNKALFGTDAHLGHLRVVGARAFVHEETHTKKLDSRAWEGRLVGYSLDSKSYRIYNAQTRRVRESRNVMFIE------PTPAPPSLDERGF--DDGEFTYADHDDMIRDMRNYTT------NHSVDALPPTHAVGDPSVLELLEDIS 918          
BLAST of mRNA_H-paniculata_contig20716.5380.1 vs. uniprot
Match: A0A6H5JKW9_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKW9_9PHAE)

HSP 1 Score: 355 bits (912), Expect = 1.450e-105
Identity = 200/432 (46.30%), Postives = 261/432 (60.42%), Query Frame = 0
Query:   39 STVSVMVDSGASGHYFDDTLIPGLRYKLFNYQELTVPRKITTAGGHQLAGVGQGLLRGHINDSEGVKRLVQISCLVVPGLGRNLFSVKQATRNGVVSIFDMNNPRLETNNFTVPLQELESDLYFFSLEITSGSGAPGLAMQAADTATLWHRRMGHLNRNSLNLLKTVDDNGVDFGGAVPDCDICAVGKSHQLAHPKTADNQVQRAFQLVMTDLMGPIMPEALGGFKYACKISDEYTRWTEIYLLKTKDGALHAFQSFIQSMVIPGGVRVERLRADKGGEFIGNDFRSYCRQTGVLLEFASTNTPQQIGMSERVGRTLAAMVRCMLADSGLPTFLWGELMFTAAYLANRAPHSALGMQSPHKMLKGTEPDLRHLRVIGARAFVHIERHTPKLALKAVEGRLVGYSNHSKSYRVYNPATRRIIESRNVVFIETP 470
            S++ ++VD GA  +Y D  L PGLR  + + + L VP  I  AG   L GV  G + G + D  G  R V    ++VPGLG  LFSV  A   GV ++   +N RLE+ +   P+Q L        ++ T+G     + +++AD   LWHRRMGH+N  SL++L+    NGVD+ G V DC +C +GKS Q  HPK A   V R FQ V  D +GP  P AL GFK A K  D+  +          +G+L  F    +  V+P G R+  LR D+G EF   +FR YC+  G+ LEFA+ NTPQQIG ++R  RT+  +V C+LADS LP FLWGEL+ TA YL++R PH+AL   +P+K L G +  L HLRVIG+RAFVH E HT KL  +A EGRL GYS  SKSYR+YN  TRR+  SRNVVFIETP
Sbjct:  506 SSIRMVVDRGARDNYLDPGLTPGLRAHMRDVKYLRVPHTIVAAGQRVLKGVATGTIFGAVTDDNGNDRHVSFCVVLVPGLGTKLFSVTLAMLKGVATLCHPDNHRLESGDVVFPMQTL-------GVDATTGKRIYSIEVESAD---LWHRRMGHINGKSLDVLRKEPVNGVDYTGDVKDCSVCPLGKSAQQPHPKQATYGVLRPFQHVSVDTLGPFTPTALSGFKVATKFVDQKDK-------ACSEGSLALFN---KGTVVPTGERIHCLRGDQGTEFTSAEFRQYCQDIGIELEFAAPNTPQQIGPNDRARRTILNVVHCLLADSTLPNFLWGELIQTAVYLSSRVPHAALQNGTPYKALYGKDAYLGHLRVIGSRAFVHEETHTRKLEHRAREGRL-GYSMDSKSYRIYNSETRRVRVSRNVVFIETP 916          
BLAST of mRNA_H-paniculata_contig20716.5380.1 vs. uniprot
Match: A0A6H5KL37_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL37_9PHAE)

HSP 1 Score: 343 bits (880), Expect = 4.620e-103
Identity = 194/419 (46.30%), Postives = 252/419 (60.14%), Query Frame = 0
Query:  132 GVVSIFDMNNPRLETNNFTVPLQELESDLYFFSLEITSGSGAPGLAMQAADTATLWHRRMGHLNRNSLNLLKTVDDNGVDFGGAVPDCDICAVGKSHQLAHPKTADNQVQRAFQLVMTDLMGPIMPEALGGFKYACKISDEYTRWTEIYLLKTKDGALHAFQSFIQSMVIPGGVRVERLRADKGGEFIGNDFRSYCRQTGVLLEFASTNTPQQIGMSERVGRTLAAMVRCMLADSGLPTFLWGELMFTAAYLANRAPHSALGMQSPHKMLKGTEPDLRHLRVIGARAFVHIERHTPKLALKAVEGRLVGYSNHSKSYRVYNPATRRIIESRNVVFIETPPHLTPTGEPQLLIHPSSPSDSEGHNYATDDDFLRDLRDHTSVLAQPARVSVDHATASGVSSNPQVAELLERISTITRRDM 550
            GV ++F  +NPRLE+ +   P+Q L        ++ T+G     + +++AD   LWHRRMGH+N  +L++L+    NGVD+ G V  C +C +GKS Q  HPK A   V R FQ    D +GP  P ALGG KYA K  D+ T+W EI L+K +  ++ +   F +  V+P G R+  LR D+G EF   +FR YC+  G+ LEFAS N PQQIG +ER GRT+  +VRC+LADS LP FLWGEL+ TA YL+NR PH+AL   +P+K L G +  L HLRVIG+RAFVH E HT KL  +A EGRLVGYS  SKSYR+YN  TRR+  SRNVVFIETPP      E           D     Y T DD +RD+R++T         S+D         +  V ELLE+I   T RD+
Sbjct:    4 GVATLFHPDNPRLESGDVFFPMQTL-------GVDATTGKRIYSIKVESAD---LWHRRMGHINGKNLDVLRKEQVNGVDYTGDVKYCSVCPLGKSAQQPHPKQATYGVLRPFQ---HDTLGPFAPTALGGSKYATKFVDQQTKWAEIVLMKDETCSVDSLALFNKGTVVPTGERIHCLRGDQGTEFTSAEFRQYCQDIGIKLEFASPNIPQQIGANERAGRTILNVVRCLLADSTLPNFLWGELIQTAVYLSNRVPHAALQNGTPYKALYGKDAYLGHLRVIGSRAFVHEETHTRKLEHRAWEGRLVGYSMDSKSYRIYNSETRRVRVSRNVVFIETPPVAPALDEFGF--------DDREFTYDTHDDMVRDVRNYT------FNHSIDSLPPDHDVGDIPVIELLEQIHETTNRDL 395          
BLAST of mRNA_H-paniculata_contig20716.5380.1 vs. uniprot
Match: A0A6H5JC75_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC75_9PHAE)

HSP 1 Score: 346 bits (888), Expect = 7.050e-102
Identity = 195/432 (45.14%), Postives = 252/432 (58.33%), Query Frame = 0
Query:   60 PGLRYKLFNYQELTVPRKITTAGGHQLAGVGQGLLRGHINDSEGVKRLVQISCLVVPGLGRNLFSVKQATRNGVVSIFDMNNPRLETNNFTVPLQELESD------LYFFSLEITSGSGAPGLAMQAAD-------TATLWHRRMGHLNRNSLNLLKTVDDNGVDFGGAVPDCDICAVGKSHQLAHPKTADNQVQRAFQLVMTDLMGPIMPEALGGFKYACKISDEYTRWTEIYLLKTKDGALHAFQSFIQSMVIPGGVRVERLRADKGGEFIGNDFRSYCRQTGVLL-------EFASTNTPQQIGMSERVGRTLAAMVRCMLADSGLPTFLWGELMFTAAYLANRAPHSALGMQSPHKMLKGTEPDLRHLRVIGARAFVHIERHTPKLALKAVEGRLVGYSNHSKSYRVYNPATRRIIESRNVVFIETPP 471
            PGLR  + + + L VP  I  AG H L GV  G   G + D  G  R V    ++VPGL  NLFSV  A   G  ++   ++PRLE+ +  +P+Q L  D      +Y   +++   +G P +   A D       +A LWHRRMGH+N   L++L+    NGVD+ G V DC +     +            V R FQ V  D +GP  P ALGGFKYA K  ++ T+W EI L+K K  ++ +   F +  V+P G R+  LR D+G EF   +FR YC+   + L       EFAS NTPQQIG + R GRT+  +VRC+LADS LP FLWGEL+ TA YL+NR PH+AL   +P+K L G +  L HLRVIG+RAFVH   HT KL  +A EGRLVGYS  SKSYR+YN  TRR+  SRNVVFIETPP
Sbjct:  452 PGLRAHMRDVEHLRVPHTIVAAGQHVLKGVATGTFFGAVTDDNGTDRHVSFCVILVPGLSTNLFSVTLAMLKGEATLVHPDDPRLESGDVVIPMQTLGVDTTTGKRIYSIEVKLGGEAGGPMVLEDAPDALALKVESADLWHRRMGHINGKRLDVLRKEPVNGVDYTGDVKDCHLRR--PAPLXXXXXXXXXXVLRPFQHVSVDTVGPFKPTALGGFKYATKFVEQQTKWEEIVLMKDKPCSVDSLALFNKGTVVPAGERIPCLRGDQGTEFTSAEFRQYCQNISIKLXNISIKLEFASPNTPQQIGANARAGRTILNVVRCLLADSTLPNFLWGELIQTAVYLSNRVPHAALQNGTPYKALYGKDAYLGHLRVIGSRAFVHEATHTRKLEHRAWEGRLVGYSTVSKSYRIYNSETRRVRVSRNVVFIETPP 881          
BLAST of mRNA_H-paniculata_contig20716.5380.1 vs. uniprot
Match: A0A6H5KY84_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY84_9PHAE)

HSP 1 Score: 342 bits (877), Expect = 1.550e-99
Identity = 184/444 (41.44%), Postives = 257/444 (57.88%), Query Frame = 0
Query:   47 SGASGHYFDDTLIPGLRYKLFNYQELTVPRKITTAGGHQLAGVGQGLLRGHINDSEGVKRLVQISCLVVPGLGRNLFSVKQATRNGVVSIFDMNNPRLET-------NNFTVPLQELESDLYFFSLEITSGSGAPG---------------LAMQAADTATLWHRRMGHLNRNSLNLLKTVDDNGVDFGGAVPDCDICAVGKSHQLAHPKTADNQVQRAFQLVMTDLMGPIMPEALGGFKYACKISDEYTRWTEIYLLKTKDGALHAFQSFIQSMVIPGGVRVERLRADKGGEFIGNDFRSYCRQTGVLLEFASTNTPQQIGMSERVGRTLAAMVRCMLADSGLPTFLWGELMFTAAYLANRAPHSALGMQSPHKMLKGTEPDLRHLRVIGARAFVHIERHTPKLALKAVEGRLVGYSNHSKSYRVYNPATRRIIESRNVVFIE 468
            SGASGHY D  L+P L   L ++  +T P KI  AGG +L G  +G++     D EG  R V+  C VVPGLGR+LFS   A + G  +I   + PR+E        +   + L+E+ + LYF  + + +                     +A   A+   LWHRR+ H ++  +     + + GV     +  C+ C + KS Q  HPKTA +   +  Q V TDL+GPI P A GGF Y  K +DEY+R   +YL++TKD A+   + FI  +VIP G R+ERLR+D GGE+    +  +C+  G++ EF +  TPQQ G+SER GRTL  +VRC+L    LP +LWGEL  TA ++ NR PH  L  ++P+  + G +  LRHLRVIG+ AFVH+E +  KLA +A  G LVGYS +S +YR+YNP T+RI+ SRNV FIE
Sbjct:  311 SGASGHYLDSELLPDLENILDDFTYITTPTKIIGAGGIELEGTSKGIISVFAKDEEGNDRRVRFKCTVVPGLGRHLFSTGTAQKKGANTIMS-DQPRIELPATSRDGSTIALVLREVGT-LYFLDVRLDTNQCERRRRITEENMNTYENSYVAAPRAEPYNLWHRRLAHCHKGIIEAAARIKETGVKLTDNLDPCETCKLQKSTQRKHPKTAKHTAVQPCQRVYTDLLGPISPPAKGGFNYVSKFTDEYSRMNVVYLIRTKDEAIDTLERFIDDIVIPNGFRLERLRSDCGGEYTAEYYTKFCKTIGIVQEFTAPATPQQNGISERAGRTLMNIVRCLLHGGQLPEYLWGELCCTAVHITNRLPHVHLNNETPYYRMFGKQASLRHLRVIGSSAFVHVETYKSKLANRAWPGILVGYSPNSNAYRIYNPHTKRIVPSRNVTFIE 752          
BLAST of mRNA_H-paniculata_contig20716.5380.1 vs. uniprot
Match: A0A6H5KVF6_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVF6_9PHAE)

HSP 1 Score: 325 bits (833), Expect = 2.630e-98
Identity = 174/423 (41.13%), Postives = 244/423 (57.68%), Query Frame = 0
Query:   41 VSVMVDSGASGHYFDDTLIPGLRYKLFNYQELTVPRKITTAGGHQLAGVGQGLLRGHINDSEGVKRLVQISCLVVPGLGRNLFSVKQATRNGVVSIFDMNNPRLETNNFTVPLQELESDLYFFSLEIT-----SGSGAPGLAMQAADTAT--------------LWHRRMGHLNRNSLNLLKTVDDNGVDFGGAVPDCDICAVGKSHQLAHPKTADNQVQRAFQLVMTDLMGPIMPEAL---GGFKYACKISDEYTRWTEIYLLKTKDGALHAFQSFIQSMVIPGGVRVERLRADKGGEFIGNDFRSYCRQTGVLLEFASTNTPQQIGMSERVGRTLAAMVRCMLADSGLPTFLWGELMFTAAYLANRAPHSALGMQSPHKMLKGTEPDLRHLRVIGARAFVHIERHTPKLALKAVEGRLVGY 441
            V ++VD+GAS   FD+ LIP     L +Y +   P+ +  AG  QL G   G+L   + D+ G +  V+I  L+VPGLGRN+FS     + G+  + + + P L      +PL +   D    +L+IT       SG   L      + T               WHRR+GHLN  SL++L+      VD+  ++  C +C + K  Q  HPK +  ++ R  QLV+ D MGP+ P A    G F YACK++D+YT+  E+YLL+ K     A  ++   +   GG R+E +R DKGGE  G++FR YC+ + + LE+A+TNTPQQIG+SER G+TLA + RC+L D   P  +WGELM TAAYL NR+PHSALG  +P+  L+   PDL  LRVIGARAFVH ER+  KL  +A EG+L G+
Sbjct:  206 VGLLVDTGASEPMFDNRLIPD--GNLHDYTQRNSPKIVDVAGERQLKGTATGILHCTVKDNRGQQLRVRIQGLIVPGLGRNIFSPTSLLKRGLRCVGEKSTPHLTIQGKVIPLTQDPRDQGMCTLDITFEQNVQPSGTKSLVPHQKQSQTHTANAVCFTLVSADTWHRRLGHLNARSLDILRKDTGTEVDYRDSLSPCGVCQIAKHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKVTDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLRNKSPDLSGLRVIGARAFVHHERYRKKLDDRAFEGKLCGF 626          
BLAST of mRNA_H-paniculata_contig20716.5380.1 vs. uniprot
Match: A0A6H5KAG6_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAG6_9PHAE)

HSP 1 Score: 327 bits (839), Expect = 2.640e-95
Identity = 187/492 (38.01%), Postives = 268/492 (54.47%), Query Frame = 0
Query:   40 TVSVMVDSGASGHYFDDTLIPGLRYKLFNYQELTVPRKITTAGGHQLAGVGQGLLRGHINDSEGVKRLVQISCLVVPGLGRNLFSVKQATRNGVVSIFDMNNPRLETNNFTVPLQELES--DLYFFSLEITSGSGAP----------GLAMQAADT----------------------------------------ATLWHRRMGHLNRNSLNLLKTVDDNGVDFGGAVPDCDICAVGKSHQLAHPKTAD-NQVQRAFQLVMTDLMGPIMPEALGGFKYACKISDEYTRWTEIYLLKTKDGALHAFQSFIQSMVIPGGVRVERLRADKGGEFIGNDFRSYCRQTGVLLEFASTNTPQQIGMSERVGRTLAAMVRCMLADSGLPTFLWGELMFTAAYLANRAPHSALGMQSPHKMLKGTEPDLRHLRVIGARAFVHIERHTPKLALKAVEGRLVGYSNHSKSYRVYNPATRRIIESRNVVFIETPPHLTPTGE 478
            T ++ VD+GAS H+ D+ LIP L  ++  Y ++  P  I  AG  QL G  +G L+  + D  G  R +++  + VP LGR+LFS   A + GV S F  +   L+T  F +PL+  ++   L+ F L I   S A            L  ++A+T                                        A  WH+R+GH N   L  L  +D +GV    +   C  C + KS Q  HPK A+ + +    QLV TDL+GPI P A+GG+ Y  K +D  TR   +Y +  K  AL +  +++Q + IP G+RV+ L +D GGE++ +DFR YCR TG++  F+S +TPQQ G+SER GRT+  M RC++ ++ LP  LWGE+  T+ +L NR PH AL   +P+  + G + +L  LR+IG+RAFVHIE HT KL  KA EG LVGY++ S ++R+YN  T RI  +RNV FIE PP + P  E
Sbjct:   42 TFTMTVDTGASNHFLDNELIPALEQRMVEYTKIDPPLLIHVAGQGQLHGTAKGALKVTVTDQNGNPRSIRLPFICVPKLGRHLFSGGTARKQGV-STFIGSTSFLDTGVFKIPLRPDDACDTLFHFDLAIAPDSVATHHAFSTISGLDLPTESANTVYTSASASSASSTTTGAVAGARPAXXXXXXXXXXXXXTASANTWHQRLGHPNVQVLEQLARIDGSGVHLRDSFSACGTCKINKSSQQNHPKIANMDGITERLQLVSTDLLGPISPSAIGGYNYMAKFTDHATRLKAVYFIAKKGDALSSLVNYVQDVAIPLGLRVQYLHSDNGGEYVNSDFRDYCRTTGIIQRFSSPHTPQQNGISERDGRTIMNMARCIINETNLPKHLWGEIAATSVFLINRLPHKALKGDTPYFRMFGKQANLSFLRIIGSRAFVHIEGHTTKLQAKAWEGVLVGYNDDSPTFRIYNRTTGRITSTRNVTFIEKPPAVLPIVE 532          
BLAST of mRNA_H-paniculata_contig20716.5380.1 vs. uniprot
Match: A0A6H5KJH6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJH6_9PHAE)

HSP 1 Score: 330 bits (846), Expect = 3.810e-94
Identity = 216/540 (40.00%), Postives = 277/540 (51.30%), Query Frame = 0
Query:   95 RGHINDSEGVKRLVQISCLVVPGLGRNLFSVKQATRNGVVSIFDMNNPRLETNNFTVPLQELESD---LYFFSLEI----------TSGSGAPGLAMQAADTATLWHRRMGHLNRNSLNLLKTVDDNGVDFGGAVPDCDICAVGKSHQLAHPKTADNQVQRAFQLVMTDLMGPIMPEALGGFKYACKISDEYTRWTEIYLLKTKDGALHAFQSFIQSMVIPGGVRVERLRADKGGEFIGNDFRSYCRQTGVLLEFASTNTPQQIGMSERVGRTLAAMVRCMLADSGLPTFLWGELMFTAAYLANRAPHSALGMQSPHKMLKGTEPDLRHLRVIGARAFVHIERHTPKLALKAVEGRLVGYSNHSKSYRVYNPATRRII--------------------------------------ESRNVVFIET---PPHLTPTGEPQLLIHPSSPSDSEGHNYATDDDFLRDLRDHTSVLAQPARVSVDHATASGVSSNPQVAELLERISTITRRDMLHDDATPREGT-------SPASPEGGEPPE 573
            RGH+ D          +C +VPGLG NLFSV  A  NGV S+F  +NPRLE+ +  VP++    D       S+ I          T G    GL ++  +TA LWHRRMGH+N  SL++L+    +G+D+ G V DC  C +GKS Q  HPK A   V   FQLV  D +GP  P ALGGFKYA K  D++T+W E+ L+K K  ++ A + F +  VIP   R+  LRADKG EF    +R YC   G+ L+FAS NTP QIG +ER GRT+  +VRCMLADS LP+ LWGELM TA YL+NR PH+AL           T+  L HLRV+GARAFVH E HT KL     + R V  SN +    ++N    + +                                      ESRN +FIET   PP L   G            D     YA  DD +RD+R++T+        SVD  + +    +P V ELLE IST+  RD+  + A P           S ASP G  PPE
Sbjct:  602 RGHVQDCS--------ACPLVPGLGTNLFSVTAALSNGVASLFYPDNPRLESADAVVPMKIQGVDNTGKITCSITIKLGAENGGRQTPGETPDGLPLRV-ETADLWHRRMGHINNKSLDVLRQQAASGIDYRGDVQDCSACPLGKSSQQPHPKHAVYGVSTPFQLVFVDTLGPFTPTALGGFKYATKFVDQHTKWKEVVLMKDKTCSIDALELFNKGTVIPRSARIHVLRADKGTEFTNAAYRQYCLDVGIQLQFASPNTPHQIGANERAGRTIMNIVRCMLADSTLPSLLWGELMQTAVYLSNRTPHAALHNXXXXXXXFSTDAHLGHLRVVGARAFVHEETHTKKL-----DSRXVYLSNRTPHAALHNGTPYKALFGTDAHLGHLRVVGARAFVHEETHTKKLDSRAWEGRRGESRNGIFIETNPAPPSLDERG-----------FDDGEFTYADHDDMIRDVRNYTT------NHSVDALSPTHAVGDPSVLELLEDISTVHNRDLGTNSADPAPAAEDAPADDSLASPGGVSPPE 1110          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig20716.5380.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KJN3_9PHAE3.730e-13946.59Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A6H5JYB5_9PHAE2.080e-13345.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J842_9PHAE2.420e-13047.49Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A6H5JKW9_9PHAE1.450e-10546.30Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KL37_9PHAE4.620e-10346.30Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JC75_9PHAE7.050e-10245.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KY84_9PHAE1.550e-9941.44Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KVF6_9PHAE2.630e-9841.13Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KAG6_9PHAE2.640e-9538.01Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KJH6_9PHAE3.810e-9440.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 233..424
e-value: 6.5E-30
score: 105.8
IPR025724GAG-pre-integrase domainPFAMPF13976gag_pre-integrscoord: 179..227
e-value: 2.4E-6
score: 27.3
IPR001584Integrase, catalytic corePFAMPF00665rvecoord: 242..357
e-value: 2.6E-12
score: 47.0
IPR001584Integrase, catalytic corePROSITEPS50994INTEGRASEcoord: 229..405
score: 17.651
NoneNo IPR availablePANTHERPTHR11439:SF250coord: 36..468
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 36..468
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 240..399

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig20716contigH-paniculata_contig20716:2280..4376 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig20716.5380.1mRNA_H-paniculata_contig20716.5380.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig20716 2280..4376 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig20716.5380.1 ID=prot_H-paniculata_contig20716.5380.1|Name=mRNA_H-paniculata_contig20716.5380.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=699bp
SNNNLNSKPETFRGITDVDDGSALAAGPAFEKWNDDNNSTVSVMVDSGAS
GHYFDDTLIPGLRYKLFNYQELTVPRKITTAGGHQLAGVGQGLLRGHIND
SEGVKRLVQISCLVVPGLGRNLFSVKQATRNGVVSIFDMNNPRLETNNFT
VPLQELESDLYFFSLEITSGSGAPGLAMQAADTATLWHRRMGHLNRNSLN
LLKTVDDNGVDFGGAVPDCDICAVGKSHQLAHPKTADNQVQRAFQLVMTD
LMGPIMPEALGGFKYACKISDEYTRWTEIYLLKTKDGALHAFQSFIQSMV
IPGGVRVERLRADKGGEFIGNDFRSYCRQTGVLLEFASTNTPQQIGMSER
VGRTLAAMVRCMLADSGLPTFLWGELMFTAAYLANRAPHSALGMQSPHKM
LKGTEPDLRHLRVIGARAFVHIERHTPKLALKAVEGRLVGYSNHSKSYRV
YNPATRRIIESRNVVFIETPPHLTPTGEPQLLIHPSSPSDSEGHNYATDD
DFLRDLRDHTSVLAQPARVSVDHATASGVSSNPQVAELLERISTITRRDM
LHDDATPREGTSPASPEGGEPPEKTVAPSQDGASQSTETSSTEPPLNHPH
HTHHQVTPAVTRAGVAARSFRERNANNDSPASTHLAAIANDKTLSELRQL
GLYTNALLPDVAHQTFEAESVVEYAYTTTSLLSCSVGEKAEKIPNTFKE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036397RNaseH_sf
IPR025724GAG-pre-integrase_dom
IPR001584Integrase_cat-core
IPR039537Retrotran_Ty1/copia-like
IPR012337RNaseH-like_sf