mRNA_H-paniculata_contig20703.5377.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig20703.5377.1
Unique NamemRNA_H-paniculata_contig20703.5377.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig20703.5377.1 vs. uniprot
Match: D7FZ17_ECTSI (Domain repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ17_ECTSI)

HSP 1 Score: 380 bits (977), Expect = 3.610e-126
Identity = 188/306 (61.44%), Postives = 227/306 (74.18%), Query Frame = 1
Query:    1 GRNNWGQLGQGDYVDRGETALSMGDALLPIDLGTTSDGVSPLLATGVAAGAEFTCVLLEDASVKCLGRNDEGQLGRGDTEDNVGSSAV-DLGDALVAVDLGTNVTVAAISSGTAATCANLEGGGMKCWGSNAYGGLGVEDSLARGDEAKDMGDNLAEVDLGTGVEAETVFYGQRHVCAIVTGGRVKCWGDNRSGQLGIGHVDTIGDDAGEMGDGLPFVDLGVGAKASWLSLGESHSCAMLASGEIKCWGKGYSGQLGDGQYTARGKYPDEMSTGLVAVDLGTGTDAAVLGAGHDHTCAALDDGSLK 915
            GRN+WGQLG+GD++DRG+   +MG+ L  +DLGT   G    +A  +  G +FTCVL+E   VKC GRNDEGQ GRG+ + NVGS+ + D+GD L  V+LGT V + ++SSGTA+TCA L GGG+KCWG N+YGGLGV DS   GDE  DMGDN+ EVDLGTG     V YG RH CAI+ GG VKCWGDNRSGQLG+GHVDTIGDD  EMGD LP+VDLG G  A+ LSLGESH+CA+L  G  +CWGKG++GQLG G+Y +RGKY  EM  GL AVDLGT   ++ L AG D TCA LDDGS+K
Sbjct:  112 GRNDWGQLGKGDFLDRGDDPATMGNNLTAVDLGTAPSGNGTAVAVAITTGQQFTCVLVEGGGVKCFGRNDEGQCGRGNLDTNVGSNGLEDMGDNLPYVNLGTGVEMISVSSGTASTCAALLGGGVKCWGGNSYGGLGVGDSYNVGDEEDDMGDNVQEVDLGTGETGYYVAYGLRHACAILMGGSVKCWGDNRSGQLGLGHVDTIGDDPFEMGDDLPYVDLGAGNTATSLSLGESHTCAILGDGSTRCWGKGFAGQLGRGEYYSRGKYVGEMGAGLAAVDLGTNATSSFLAAGADFTCAGLDDGSVK 417          
BLAST of mRNA_H-paniculata_contig20703.5377.1 vs. uniprot
Match: A0A6H5L5B3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5B3_9PHAE)

HSP 1 Score: 385 bits (988), Expect = 8.310e-125
Identity = 191/306 (62.42%), Postives = 224/306 (73.20%), Query Frame = 1
Query:    1 GRNNWGQLGQGDYVDRGETALSMGDALLPIDLGTTSDGVSPLLATGVAAGAEFTCVLLEDASVKCLGRNDEGQLGRGDTEDNVGSSAV-DLGDALVAVDLGTNVTVAAISSGTAATCANLEGGGMKCWGSNAYGGLGVEDSLARGDEAKDMGDNLAEVDLGTGVEAETVFYGQRHVCAIVTGGRVKCWGDNRSGQLGIGHVDTIGDDAGEMGDGLPFVDLGVGAKASWLSLGESHSCAMLASGEIKCWGKGYSGQLGDGQYTARGKYPDEMSTGLVAVDLGTGTDAAVLGAGHDHTCAALDDGSLK 915
            GRN+WGQLG+GD++DRG+   +MG+ L  +DLGT   G    +A  +  G +FTCVL+E   VKC GRNDEGQ GRG+ + NVGS+ + D+GD L  VDLG  V   ++SSGTA+TCA L GGG+KCWG N+YGGLGV DS   GDE  DMGDNL EVDLGTG     V YG RH CAI+ GG VKCWGDNRSGQLG+GHVDTIGDD  EMGD LP+VDLG G  A+ LSLGESHSCA+L  G  +CWGKG++GQLG G+Y  RGKY  EM  GL AVDLGT   A+ L AG D TCA LDDGS+K
Sbjct:  150 GRNDWGQLGKGDFLDRGDDPATMGNNLTAVDLGTAPSGNGTAVAVAITTGQQFTCVLVEGGGVKCFGRNDEGQCGRGNLDTNVGSNGLEDMGDNLPYVDLGAGVQAISVSSGTASTCAALLGGGVKCWGGNSYGGLGVGDSYNVGDEEDDMGDNLQEVDLGTGETGYYVAYGLRHACAILMGGNVKCWGDNRSGQLGLGHVDTIGDDPSEMGDDLPYVDLGAGNTATSLSLGESHSCAILGDGSTRCWGKGFAGQLGRGEYYCRGKYVGEMGAGLAAVDLGTNATASFLAAGADFTCAGLDDGSVK 455          
BLAST of mRNA_H-paniculata_contig20703.5377.1 vs. uniprot
Match: A0A835T669_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835T669_9CHLO)

HSP 1 Score: 261 bits (667), Expect = 9.650e-81
Identity = 150/305 (49.18%), Postives = 182/305 (59.67%), Query Frame = 1
Query:    1 GRNNWGQLGQGDYVDRGETALSMGDALLPIDLGTTSDGVSPLLATGVAAGAEFTCVLLEDASVKCLGRNDEGQLGRGDTEDNVGSSAVDLGDALVAVDLGTNVTVAAISSGTAATCANLEGGGMKCWGSNAYGGLGVEDSLARGDEAKDMGDNLAEVDLGTGVEAETVFYGQRHVCAIVTGGRVKCWGDNRSGQLGIGHVDTIGDDAGEMGDGLPFVDLGVGAKASWLSLGESHSCAMLASGEIKCWGKGYSGQLGDGQYTARGKYPDEMSTGLVAVDLGTGTDAAVLGAGHDHTCAALDDGSLK 915
            G NN GQLG GD   RG+    MGD L  I LGT         AT ++ G   TC LL++ SVKC G N  GQLG GDT D  G    ++GD L A+ LGT  T AAIS G   TCA L+ G +KCWG NAYG LG+ D+ +RGD   +MGD L  + LGTG  A+ +  G  H CA++  G VKCWG N +GQLG+G      D  GEMGD LP V LG G  A+ +S G  H+CA+L +G +KCWG    GQLG G  + RG  P EM   L A+ LGTG  A  + AG  HTCA LD+GS+K
Sbjct:  127 GYNNAGQLGLGDTSSRGDGPGEMGDTLPAITLGTGRT------ATAISVGGIHTCALLDNGSVKCWGYNAYGQLGLGDTSDR-GDGPGEMGDTLPAITLGTGRTAAAISVGGYHTCALLDNGSIKCWGYNAYGQLGLGDTSSRGDGPGEMGDTLPAITLGTGRTAKAISAGGYHTCALLDNGSVKCWGANGNGQLGLGDTSYRSDGPGEMGDTLPAVVLGTGRTATAISAGYYHTCALLDNGYVKCWGYNSDGQLGLGDTSYRGNGPGEMGDTLPAITLGTGRTAMAIFAGGYHTCALLDNGSVK 424          
BLAST of mRNA_H-paniculata_contig20703.5377.1 vs. uniprot
Match: A0A0K1EHP4_CHOCO (Uncharacterized protein n=2 Tax=Chondromyces crocatus TaxID=52 RepID=A0A0K1EHP4_CHOCO)

HSP 1 Score: 257 bits (657), Expect = 8.770e-78
Identity = 146/305 (47.87%), Postives = 179/305 (58.69%), Query Frame = 1
Query:    1 GRNNWGQLGQGDYVDRGETALSMGDALLPIDLGTTSDGVSPLLATGVAAGAEFTCVLLEDASVKCLGRNDEGQLGRGDTEDNVGSSAVDLGDALVAVDLGTNVTVAAISSGTAATCANLEGGGMKCWGSNAYGGLGVEDSLARGDEAKDMGDNLAEVDLGTGVEAETVFYGQRHVCAIVTGGRVKCWGDNRSGQLGIGHVDTIGDDAGEMGDGLPFVDLGVGAKASWLSLGESHSCAMLASGEIKCWGKGYSGQLGDGQYTARGKYPDEMSTGLVAVDLGTGTDAAVLGAGHDHTCAALDDGSLK 915
            G N  GQLG GD   RG+    MGDAL  ++LGT    ++      +  G   TC LL+D SVKC G N  G+LG GDT    G    ++GDAL+AVDLG   T AA+S G +  CA L+ G +KCWG N  G LG+ D+  RGD A +MGD L  VDLGTG  A  V  G  H CA++  G +KCWG N SG+LG+G     GD AGEMGD LP VDLG G KA  LS+G   SCA+L     KCWG   +G LG G  + RG  P EM   L A+DLG G    ++   + HTCA L+ G+LK
Sbjct:  276 GANTSGQLGLGDTAPRGDGPGEMGDALPTVNLGTGRTALA------IGGGDRHTCALLDDGSVKCWGFNTGGKLGLGDTAPR-GDGPGEMGDALLAVDLGAGRTAAALSVGGSHACALLDDGSVKCWGGNGQGQLGLGDAEHRGDGAGEMGDALPAVDLGTGKTAVAVHAGHFHTCALLNDGSLKCWGGNDSGELGLGDTAHRGDAAGEMGDALPAVDLGTGKKAVALSVGVFRSCALLEDASFKCWGNNTAGALGLGDTSRRGDGPGEMGDALPAIDLGAGASTTLVVTRYTHTCARLEAGNLK 573          
BLAST of mRNA_H-paniculata_contig20703.5377.1 vs. uniprot
Match: A0A848LCV5_9DELT (Tandem-95 repeat protein n=2 Tax=Pyxidicoccus fallax TaxID=394095 RepID=A0A848LCV5_9DELT)

HSP 1 Score: 260 bits (665), Expect = 7.860e-77
Identity = 150/305 (49.18%), Postives = 184/305 (60.33%), Query Frame = 1
Query:    1 GRNNWGQLGQGDYVDRGETALSMGDALLPIDLGTTSDGVSPLLATGVAAGAEFTCVLLEDASVKCLGRNDEGQLGRGDTEDNVGSSAVDLGDALVAVDLGTNVTVAAISSGTAATCANLEGGGMKCWGSNAYGGLGVEDSLARGDEAKDMGDNLAEVDLGTGVEAETVFYGQRHVCAIVTGGRVKCWGDNRSGQLGIGHVDTIGDDAGEMGDGLPFVDLGVGAKASWLSLGESHSCAMLASGEIKCWGKGYSGQLGDGQYTARGKYPDEMSTGLVAVDLGTGTDAAVLGAGHDHTCAALDDGSLK 915
            G N +G LG GD  +RG+    MG  +  +DLGT         A   AAG   TC +L++ ++KC G N  GQLG GD E N G    ++GD L  VDLGT  T   +++G A TCA L+ G +KCWG N YG LG+ D+ +RGD+  +MGD L  VDLGTG  A+T+  G  +VCAI+  G VKCWGDNRSG LG+G  +  GDD GEMGD LP V+LG G  A  L+ G SH CA+L    +KCWG   SG LG G    RG  P EM   L  V LGTG  A  L AG  HTCA+LDDG +K
Sbjct:  550 GDNRFGSLGLGDTNNRGDGPGEMGTGMPLVDLGTGRS------AKVFAAGGAHTCAILDNDTLKCWGLNAWGQLGLGDHE-NRGDRPGNIGDWLSPVDLGTGRTARGLAAGGAHTCAILDDGSVKCWGDNQYGQLGLGDTRSRGDDPGEMGDALPPVDLGTGRTAKTLAAGGNYVCAILDDGTVKCWGDNRSGTLGLGDTEARGDDPGEMGDALPLVELGTGRIAMALAAGVSHVCALLDDASVKCWGDNRSGSLGLGDIANRGDAPGEMGDALPPVSLGTGRIATSLTAGT-HTCASLDDGGIK 846          
BLAST of mRNA_H-paniculata_contig20703.5377.1 vs. uniprot
Match: A0A0K1EC39_CHOCO (Uncharacterized protein n=1 Tax=Chondromyces crocatus TaxID=52 RepID=A0A0K1EC39_CHOCO)

HSP 1 Score: 250 bits (639), Expect = 1.610e-76
Identity = 149/305 (48.85%), Postives = 171/305 (56.07%), Query Frame = 1
Query:    1 GRNNWGQLGQGDYVDRGETALSMGDALLPIDLGTTSDGVSPLLATGVAAGAEFTCVLLEDASVKCLGRNDEGQLGRGDTEDNVGSSAVDLGDALVAVDLGTNVTVAAISSGTAATCANLEGGGMKCWGSNAYGGLGVEDSLARGDEAKDMGDNLAEVDLGTGVEAETVFYGQRHVCAIVTGGRVKCWGDNRSGQLGIGHVDTIGDDAGEMGDGLPFVDLGVGAKASWLSLGESHSCAMLASGEIKCWGKGYSGQLGDGQYTARGKYPDEMSTGLVAVDLGTGTDAAVLGAGHDHTCAALDDGSLK 915
            G  + GQLG GD V RG+    MGD L  + LGT  + V  L     AAG+   C LL    VKC G N  G LG GD E   G     +G+ L  VDLGT VT  A+ +G    CA L    +KCWG N YG LG+ D   RG+    MGD+L  VDLG       VF G  HVCA++T G VKCWG N  GQLG+G  D  GD  GEMGD LP VDLG G   + L+LG  HSCA+L  G +KCWG    GQLG G    RG  P EM   L  VDLG+G  A  + AG  HTCA LDDGSLK
Sbjct:   88 GEGSAGQLGLGDAVPRGDDPGEMGDDLPAVSLGT-GETVEAL-----AAGSFHHCALLRGGRVKCWGGNASGSLGLGDGEGR-GLDVGSMGENLPTVDLGTGVTAVALVAGGETNCALLPDRTLKCWGDNGYGQLGLGDVTPRGNLPGTMGDDLPAVDLGVDGAGTAVFMGAAHVCALLTRGAVKCWGANGHGQLGLGDADHRGDAPGEMGDALPDVDLGAGNLVAALALGRMHSCALLKDGSVKCWGDNERGQLGLGDTELRGDAPGEMGDALPRVDLGSGKRAVAITAGDLHTCALLDDGSLK 385          
BLAST of mRNA_H-paniculata_contig20703.5377.1 vs. uniprot
Match: A0A8J5X495_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X495_DIALT)

HSP 1 Score: 251 bits (641), Expect = 6.540e-76
Identity = 142/305 (46.56%), Postives = 178/305 (58.36%), Query Frame = 1
Query:    1 GRNNWGQLGQGDYVDRGETALSMGDALLPIDLGTTSDGVSPLLATGVAAGAEFTCVLLEDASVKCLGRNDEGQLGRGDTEDNVGSSAVDLGDALVAVDLGTNVTVAAISSGTAATCANLEGGGMKCWGSNAYGGLGVEDSLARGDEAKDMGDNLAEVDLGTGVEAETVFYGQRHVCAIVTGGRVKCWGDNRSGQLGIGHVDTIGDDAGEMGDGLPFVDLGVGAKASWLSLGESHSCAMLASGEIKCWGKGYSGQLGDGQYTARGKYPDEMSTGLVAVDLGTGTDAAVLGAGHDHTCAALDDGSLK 915
            G N +GQLGQGD +DRG+ A  MGD L P+ LGT    V       + AG   TC LL+D S KC G ND GQLG+GD  D  G  A ++GD L  + LGTN T   I++G   TCA L+ G  KCWG N++G LG  ++ ARGD   +MGD+LA V LGTG  A  +  G+ H CA++  G  KCWG+N  G+LG G     GD   EMGD L  + LG    A  ++ G SH+CA+L  G  KCWG    G+LG G   ARG   +EM   L  + LGT   A  + AG  HTCA LD+GS+K
Sbjct:   71 GDNGYGQLGQGDGLDRGDGANDMGDNLAPVLLGTNRTAVE------IVAGGFHTCALLDDGSAKCWGDNDYGQLGQGDGIDR-GDGANEMGDDLAPILLGTNRTAVEIAAGGTHTCALLDDGSAKCWGDNSFGQLGQGNTFARGDGVNEMGDDLAPVLLGTGRTAVEIVAGESHNCALLDDGSAKCWGNNFLGRLGQGDALDRGDGVNEMGDDLAPILLGTNRTAVKITAGASHNCALLDDGSAKCWGSNGKGRLGQGDVLARGDAANEMGDDLAPILLGTNRTAVKITAGASHTCALLDNGSVK 368          
BLAST of mRNA_H-paniculata_contig20703.5377.1 vs. uniprot
Match: A0A812JQX2_9DINO (UVR8 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812JQX2_9DINO)

HSP 1 Score: 248 bits (632), Expect = 2.140e-75
Identity = 139/305 (45.57%), Postives = 179/305 (58.69%), Query Frame = 1
Query:    1 GRNNWGQLGQGDYVDRGETALSMGDALLPIDLGTTSDGVSPLLATGVAAGAEFTCVLLEDASVKCLGRNDEGQLGRGDTEDNVGSSAVDLGDALVAVDLGTNVTVAAISSGTAATCANLEGGGMKCWGSNAYGGLGVEDSLARGDEAKDMGDNLAEVDLGTGVEAETVFYGQRHVCAIVTGGRVKCWGDNRSGQLGIGHVDTIGDDAGEMGDGLPFVDLGVGAKASWLSLGESHSCAMLASGEIKCWGKGYSGQLGDGQYTARGKYPDEMSTGLVAVDLGTGTDAAVLGAGHDHTCAALDDGSLK 915
            G N +GQLG GD   RG  A  +GD L P+DLG+ +      L   VAAGA  TC  L D + KC GRND GQLG GDT  N G +   +GD L +VD+GT  +V +++ G   TCA L+   +KCWGS + G LG E +  RG +A+++GD+L  VD+GTG     +  G  H CA++  G  KCWG N  G LG+      GD AG+MGD LP VDLG G  A WL  G  H+CA+L + E+KCWG    GQLG G  + RG   + M   L ++DLG+G     L  G  HTCA LDD ++K
Sbjct:   38 GLNTYGQLGVGDQSARGNQAGELGDVLPPVDLGSGN------LVLEVAAGAFHTCARLFDNTTKCWGRNDYGQLGVGDTT-NRGDATGQMGDELPSVDVGTGRSVQSLAVGDLHTCALLDDFSVKCWGSASEGQLGYESTYGRGHKAEELGDHLPVVDVGTGRSVLQIVAGDSHTCALLDDGTAKCWGKNGLGNLGLEDNTNRGDAAGQMGDNLPAVDLGSGRSAIWLDAGGEHTCALLDNFELKCWGYNAYGQLGAGDGSTRGYLSNSMGDNLPSLDLGSGAVVMTLSVGLYHTCAGLDDATIK 335          
BLAST of mRNA_H-paniculata_contig20703.5377.1 vs. uniprot
Match: A0A7C1UEQ2_9ACTN (Uncharacterized protein (Fragment) n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7C1UEQ2_9ACTN)

HSP 1 Score: 250 bits (639), Expect = 2.250e-75
Identity = 147/316 (46.52%), Postives = 181/316 (57.28%), Query Frame = 1
Query:    1 GRNNWGQLGQGDYVDRGETALSMGDALLPIDLGTTSDGVSPLLATGVAAGAEFTCVLLEDASVKCLGRNDEGQLGRGDTEDNVGSSAVDLGDALVAVDLGTNVTVAAISSGTAATCANLEGGGMKCWGSNAYGGLGVEDSLARGDEAKDMGDNLAEVDLGTGVEAETVFYGQRHVCAIVTGGRVKCWGDNRSGQLGIGHVDT-----------IGDDAGEMGDGLPFVDLGVGAKASWLSLGESHSCAMLASGEIKCWGKGYSGQLGDGQYTARGKYPDEMSTGLVAVDLGTGTDAAVLGAGHDHTCAALDDGSLK 915
            G  ++GQLGQG+    G+    MG  L PIDLGT    V+      V  G+ FTC LL+D SVKC G N  G LG G ++ +VG+   ++GD L  +DLGT  T  AIS G   TCA L+   +KCWG N  GGLG  DSL RG +  +MGDNL  +DLGTG  A  V  G    CAI+  G +KCWG NR GQ+G G+  +           IGD  GEMGD LP VDLG G  A  +S    H CA+L +GE+KCWG GY G+ G G     G  P EM   L  VDLGTG  A  +  G + TCA LD+G++K
Sbjct:   69 GAASFGQLGQGNQNTIGDGPGEMGSNLPPIDLGTGRTTVA------VGVGSGFTCALLDDGSVKCWGDNPFGILGIGKSQGSVGAHPDEMGDNLPPIDLGTGRTAVAISVGGGHTCALLDNHDLKCWGFNTAGGLGQGDSLIRGGDPDEMGDNLPPIDLGTGRTAVAVSAGGGTTCAILDNGDLKCWGANREGQMGQGYKASSLNFGPGSELHIGDAPGEMGDNLPPVDLGTGRTAVAVSASSRHICAILDNGELKCWGAGYDGRTGRGDSELIGDEPGEMGDNLPPVDLGTGRTAIAVSTGQEFTCALLDNGTVK 378          
BLAST of mRNA_H-paniculata_contig20703.5377.1 vs. uniprot
Match: D7FP43_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP43_ECTSI)

HSP 1 Score: 246 bits (629), Expect = 5.000e-75
Identity = 141/306 (46.08%), Postives = 178/306 (58.17%), Query Frame = 1
Query:    1 GRNNWGQLGQGDYVDRGETALSMGDALLPIDLGTTSDGVSPLLATGVAAGAEFTCVLLEDASVKCLGRNDEGQLGRGDTEDNVGSS-AVDLGDALVAVDLGTNVTVAAISSGTAATCANLEGGGMKCWGSNAYGGLGVEDSLARGDEAKDMGDNLAEVDLGTGVEAETVFYGQRHVCAIVTGGRVKCWGDNRSGQLGIGHVDTIGDDAGEMGDGLPFVDLGVGAKASWLSLGESHSCAMLASGEIKCWGKGYSGQLGDGQYTARGKYPDEMSTGLVAVDLGTGTDAAVLGAGHDHTCAALDDGSLK 915
            G N WGQ+GQ D + RG+ A  MGD+L  + LG          A+ VA+G+EF+C L  D +VKC GRN  GQLG GD E   G   A ++GD L  +DLGT V V +I+   +  CA L  G +KCWG N  G LG+ D+L RG+    MGDNL  VDLG  V   +V  G RH CA+V  G VKCWG+N  GQLG       G   G+MGD LP VDLG   +A  ++ G  H+CA+L +G+IKCWG G +GQLG G   + G   D M      VDLG    A  +  G  H+CAALDD ++K
Sbjct:   40 GENYWGQVGQNDNLVRGDDASDMGDSLPYVPLGEFE-------ASLVASGSEFSCALAVDGAVKCWGRNSSGQLGLGDNETRGGQDDAFEMGDNLPVLDLGTGVAVESIALAGSHACAVLADGNLKCWGENEGGQLGLGDTLTRGNAMGQMGDNLPFVDLGDEVLVSSVALGARHTCAVVGDGDVKCWGNNDGGQLGYEDTAARGIAVGQMGDLLPAVDLGTKQRAIAVAAGFFHTCALLYTGDIKCWGFGSNGQLGQGSNASIGNAVDSMGDNFGPVDLGADRTAIAVSLGGTHSCAALDDSTVK 338          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig20703.5377.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZ17_ECTSI3.610e-12661.44Domain repeat protein n=1 Tax=Ectocarpus siliculos... [more]
A0A6H5L5B3_9PHAE8.310e-12562.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835T669_9CHLO9.650e-8149.18Uncharacterized protein n=1 Tax=Chlamydomonas schl... [more]
A0A0K1EHP4_CHOCO8.770e-7847.87Uncharacterized protein n=2 Tax=Chondromyces croca... [more]
A0A848LCV5_9DELT7.860e-7749.18Tandem-95 repeat protein n=2 Tax=Pyxidicoccus fall... [more]
A0A0K1EC39_CHOCO1.610e-7648.85Uncharacterized protein n=1 Tax=Chondromyces croca... [more]
A0A8J5X495_DIALT6.540e-7646.56Uncharacterized protein n=2 Tax=Diacronema lutheri... [more]
A0A812JQX2_9DINO2.140e-7545.57UVR8 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=23... [more]
A0A7C1UEQ2_9ACTN2.250e-7546.52Uncharacterized protein (Fragment) n=1 Tax=Acidimi... [more]
D7FP43_ECTSI5.000e-7546.08Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig20703contigH-paniculata_contig20703:1646..3660 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score384.4
Seed ortholog evalue4.9e-104
Seed eggNOG ortholog2880.D7FZ17
Preferred nameRCCD1
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0016020,GO:0044424,GO:0044444,GO:0044464,GO:0071944
EggNOG free text desc.guanyl-nucleotide exchange factor activity
EggNOG OGsCOG5184@1,KOG1426@2759
Ec32 ortholog descriptionRegulator of chromosome condensation 1/beta-lactamase-inhibitor protein II
Ec32 orthologEc-20_001190.1
COG Functional cat.DZ
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons3
Model size915
Cds size915
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig20703.5377.1prot_H-paniculata_contig20703.5377.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig20703 1646..3660 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929540.617126-CDS-H-paniculata_contig20703:1645..18261622929540.617126-CDS-H-paniculata_contig20703:1645..1826Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig20703 1646..1826 -
1691480905.1865633-CDS-H-paniculata_contig20703:1645..18261691480905.1865633-CDS-H-paniculata_contig20703:1645..1826Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig20703 1646..1826 -
1622929540.6329057-CDS-H-paniculata_contig20703:2488..27541622929540.6329057-CDS-H-paniculata_contig20703:2488..2754Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig20703 2489..2754 -
1691480905.199343-CDS-H-paniculata_contig20703:2488..27541691480905.199343-CDS-H-paniculata_contig20703:2488..2754Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig20703 2489..2754 -
1622929540.6469548-CDS-H-paniculata_contig20703:3192..36601622929540.6469548-CDS-H-paniculata_contig20703:3192..3660Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig20703 3193..3660 -
1691480905.2108142-CDS-H-paniculata_contig20703:3192..36601691480905.2108142-CDS-H-paniculata_contig20703:3192..3660Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig20703 3193..3660 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig20703.5377.1

>prot_H-paniculata_contig20703.5377.1 ID=prot_H-paniculata_contig20703.5377.1|Name=mRNA_H-paniculata_contig20703.5377.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=305bp
GRNNWGQLGQGDYVDRGETALSMGDALLPIDLGTTSDGVSPLLATGVAAG
AEFTCVLLEDASVKCLGRNDEGQLGRGDTEDNVGSSAVDLGDALVAVDLG
TNVTVAAISSGTAATCANLEGGGMKCWGSNAYGGLGVEDSLARGDEAKDM
GDNLAEVDLGTGVEAETVFYGQRHVCAIVTGGRVKCWGDNRSGQLGIGHV
DTIGDDAGEMGDGLPFVDLGVGAKASWLSLGESHSCAMLASGEIKCWGKG
YSGQLGDGQYTARGKYPDEMSTGLVAVDLGTGTDAAVLGAGHDHTCAALD
DGSLK
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mRNA from alignment at H-paniculata_contig20703:1646..3660-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig20703.5377.1 ID=mRNA_H-paniculata_contig20703.5377.1|Name=mRNA_H-paniculata_contig20703.5377.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2015bp|location=Sequence derived from alignment at H-paniculata_contig20703:1646..3660- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGCCGCAACAACTGGGGCCAGTTAGGGCAGGGAGACTATGTGGACCGAGG TGAAACAGCACTCTCCATGGGAGATGCGCTGTTGCCGATAGACCTAGGCA CCACGTCCGACGGGGTTTCCCCCCTGCTCGCTACCGGCGTCGCGGCGGGC GCGGAGTTCACGTGCGTCCTGCTGGAAGACGCGTCCGTGAAGTGCCTGGG TCGAAACGACGAGGGACAGTTGGGCCGAGGGGATACGGAGGATAATGTAG GCAGCAGTGCGGTTGATCTTGGGGACGCGCTAGTCGCTGTGGACCTAGGG ACCAATGTTACCGTAGCGGCCATTTCGTCGGGGACTGCGGCTACGTGCGC GAATCTGGAGGGCGGGGGGATGAAGTGTTGGGGCAGCAATGCTTACGGGG GTCTGGGCGTGGAAGACTCGCTGGCTCGCGGGGATGAGGCCAAGGATATG GGGGATAACCTCGCCGAGGTGAGGAGGAGGGGGTAGAGGAGGGGGCACTC TTGTTTTTGCTCTCTTGTCCGGAAGAGCTTTTTATGGATTATGATTTATT CAAATAGTGAAGGATTAGAGGGGGGGGGGGGGTAATTTCAGCATATTTTT TTCAAGTTTCGAGACGATTTGCAAAACGGCTGAATATTATTATTATTTTT TTAAGCAATGCATATTTTCCCCCCCCTTTAAAACATATAACGACCAGTCC GAATCGTGCATTGTGTGCGCCTAAAATATCGTTGAACAGATGTTGGATTT AAGTCTATTTTTTCCCGCGTTCGGGGCGGCAGTCGCTAAACATTTTCCCC CCCCCCCCCCCTCCCCCCCCCCGCGCGCGCTCCCCTACCATACGTAGCCC TACTCAAATATAATCATGCTTATTGTATGCTTTCCTCAAATATCGAATGA ATATAGGTGGACCTGGGGACAGGGGTAGAAGCCGAAACGGTATTCTACGG TCAAAGGCACGTGTGCGCGATCGTTACCGGTGGTCGAGTGAAGTGCTGGG GAGATAACAGGAGCGGGCAGCTGGGTATCGGACACGTTGACACCATAGGG GACGATGCCGGGGAGATGGGAGACGGCTTGCCCTTTGTGGATCTCGGGGT CGGCGCGAAGGCGTCTTGGTTGAGTCTCGGGGAGAGTCATTCTTGCGCTA TGCTGGCAAGTGGAGAAATCAAGTGAGTTTTTCGTTCGTCGTGTGAGGCG GGAAGAGTATTATTGTGACTGTAGGAATTATGTTCAAAGGTGAAAAAAAA ATGAGACCTATCGGGCAACTTGAAAAGGAACGCTTACGCCGTAGTGATTT CTGAAACAAGAAAACAATATGACGTGGCGTGTGTCTTCCTCATTTGAATT GGATAACCTTGTCCAGTAAGCCTTCAGAACTTACCGGTTGCACTTGTTGA TTTATATTATCTTTTGTTTTTAAGATTCTCACCCGCGTCCGATTTTTTTT TTTATGATGTTATTTTCCAATCCCCTTCCCCCCCCCCCCCCCCAAAAAAA AAAAAAACGTTTCGATTTGATATATATATTATTTCCGTCAATTTATTTCG AAACTACAGCCTCAAGAATCATTCGTTTTATTGCTATTTACGGAGGAACA TAATAATCAGGAGCAAATTAGAAAATTGACATTTTGAGGTTTAACTTATG CAATACGATATGCACCAATCGGTTGCTGCATGCCTGTGCAAGTGTTTTTA GAGTGTGTTTTTGTTTTCAGCTAGAAGCGAAAATCTGTAGACCAGCGGGG GAAAAAAAAAGAACAGTTTCCGAAAAAACAAAAAAAAACTCCTGATTATC ATGTTCCTCCGTAATATTTGTTCACCGTTGTCAGATGCTGGGGAAAGGGT TACTCGGGACAACTAGGCGACGGGCAATATACCGCGAGAGGCAAATACCC CGACGAGATGAGTACTGGGTTGGTGGCAGTGGATCTCGGGACGGGTACCG ACGCCGCCGTGTTGGGTGCCGGACATGACCACACTTGCGCCGCGCTAGAC GACGGGAGTCTCAAG
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Coding sequence (CDS) from alignment at H-paniculata_contig20703:1646..3660-

>mRNA_H-paniculata_contig20703.5377.1 ID=mRNA_H-paniculata_contig20703.5377.1|Name=mRNA_H-paniculata_contig20703.5377.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1830bp|location=Sequence derived from alignment at H-paniculata_contig20703:1646..3660- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGCCGCAACAACTGGGGCCAGTTAGGGCAGGGAGACTATGTGGACCGAGG
TGAAACAGCACTCTCCATGGGAGATGCGCTGTTGCCGATAGACCTAGGCA
CCACGTCCGACGGGGTTTCCCCCCTGCTCGCTACCGGCGTCGCGGCGGGC
GCGGAGTTCACGTGCGTCCTGCTGGAAGACGCGTCCGTGAAGTGCCTGGG
TCGAAACGACGAGGGACAGTTGGGCCGAGGGGATACGGAGGATAATGTAG
GCAGCAGTGCGGTTGATCTTGGGGACGCGCTAGTCGCTGTGGACCTAGGG
ACCAATGTTACCGTAGCGGCCATTTCGTCGGGGACTGCGGCTACGTGCGC
GAATCTGGAGGGCGGGGGGATGAAGTGTTGGGGCAGCAATGCTTACGGGG
GTCTGGGCGTGGAAGACTCGCTGGCTCGCGGGGATGAGGCCAAGGATATG
GGGGATAACCTCGCCGAGGGCCGCAACAACTGGGGCCAGTTAGGGCAGGG
AGACTATGTGGACCGAGGTGAAACAGCACTCTCCATGGGAGATGCGCTGT
TGCCGATAGACCTAGGCACCACGTCCGACGGGGTTTCCCCCCTGCTCGCT
ACCGGCGTCGCGGCGGGCGCGGAGTTCACGTGCGTCCTGCTGGAAGACGC
GTCCGTGAAGTGCCTGGGTCGAAACGACGAGGGACAGTTGGGCCGAGGGG
ATACGGAGGATAATGTAGGCAGCAGTGCGGTTGATCTTGGGGACGCGCTA
GTCGCTGTGGACCTAGGGACCAATGTTACCGTAGCGGCCATTTCGTCGGG
GACTGCGGCTACGTGCGCGAATCTGGAGGGCGGGGGGATGAAGTGTTGGG
GCAGCAATGCTTACGGGGGTCTGGGCGTGGAAGACTCGCTGGCTCGCGGG
GATGAGGCCAAGGATATGGGGGATAACCTCGCCGAGGTGGACCTGGGGAC
AGGGGTAGAAGCCGAAACGGTATTCTACGGTCAAAGGCACGTGTGCGCGA
TCGTTACCGGTGGTCGAGTGAAGTGCTGGGGAGATAACAGGAGCGGGCAG
CTGGGTATCGGACACGTTGACACCATAGGGGACGATGCCGGGGAGATGGG
AGACGGCTTGCCCTTTGTGGATCTCGGGGTCGGCGCGAAGGCGTCTTGGT
TGAGTCTCGGGGAGAGTCATTCTTGCGCTATGCTGGCAAGTGGAGAAATC
AAGTGGACCTGGGGACAGGGGTAGAAGCCGAAACGGTATTCTACGGTCAA
AGGCACGTGTGCGCGATCGTTACCGGTGGTCGAGTGAAGTGCTGGGGAGA
TAACAGGAGCGGGCAGCTGGGTATCGGACACGTTGACACCATAGGGGACG
ATGCCGGGGAGATGGGAGACGGCTTGCCCTTTGTGGATCTCGGGGTCGGC
GCGAAGGCGTCTTGGTTGAGTCTCGGGGAGAGTCATTCTTGCGCTATGCT
GGCAAGTGGAGAAATCAAATGCTGGGGAAAGGGTTACTCGGGACAACTAG
GCGACGGGCAATATACCGCGAGAGGCAAATACCCCGACGAGATGAGTACT
GGGTTGGTGGCAGTGGATCTCGGGACGGGTACCGACGCCGCCGTGTTGGG
TGCCGGACATGACCACACTTGCGCCGCGCTAGACGACGGGAGTCTCAAGA
TGCTGGGGAAAGGGTTACTCGGGACAACTAGGCGACGGGCAATATACCGC
GAGAGGCAAATACCCCGACGAGATGAGTACTGGGTTGGTGGCAGTGGATC
TCGGGACGGGTACCGACGCCGCCGTGTTGGGTGCCGGACATGACCACACT
TGCGCCGCGCTAGACGACGGGAGTCTCAAG
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