mRNA_H-paniculata_contig20678.5371.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig20678.5371.1 vs. uniprot
Match: D8LHU1_ECTSI (Putative lipoprotein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHU1_ECTSI) HSP 1 Score: 202 bits (514), Expect = 3.140e-62 Identity = 102/193 (52.85%), Postives = 128/193 (66.32%), Query Frame = 1
Query: 79 AAMVLPLVATAPWPYGETFEGDGTYYSMGDVGGGNCAMHELNLNMYDGMIPVALNAEQYRNSEMCGACIKGKASGEGSGKNPIPEEFMAFVIDQCPECQEGDLDFSMSGDGRWDIEWEFVNCPRGDNNYDPDFLFEGSNDYYWKIQARGTKTPVK--------ATRTQDNFFIIEPPASEMYIGKQIVKTKTI 633
+AM++PL+ P PY E F GD TYY + G GNCA+ MYDGMIPVALN EQY +S MCGACI+G+ GEG G++P+ F A+V D+CPEC GDLDF+ GDGRWDI W FV C G D FLFEGSN++YWKIQ RG ++PV+ A R++DNFFI+E + G+Q V TKT+
Sbjct: 26 SAMIVPLI---PPPYDEQFSGDATYYGVTPDGDGNCAIRSPLPEMYDGMIPVALNDEQYADSYMCGACIEGEGFGEGEGRDPVEGAFKAYVTDRCPECLFGDLDFAADGDGRWDISWHFVPCEGGS---DQTFLFEGSNEFYWKIQPRGGRSPVERLWINGDEAERSEDNFFILE---GGPFDGEQEVHTKTV 209
BLAST of mRNA_H-paniculata_contig20678.5371.1 vs. uniprot
Match: D8LRN1_ECTSI (Uncharacterized protein n=4 Tax=Ectocarpus TaxID=2879 RepID=D8LRN1_ECTSI) HSP 1 Score: 192 bits (489), Expect = 1.350e-57 Identity = 97/179 (54.19%), Postives = 117/179 (65.36%), Query Frame = 1
Query: 121 YGETFEGDGTYYSMGDVGGGNCAMHELNLNMYDGMIPVALNAEQYRNSEMCGACIKGKASGEGSGKNPIPEEFMAFVIDQCPECQEGDLDFSMSGDGRWDIEWEFVNCPRGDNNYDPDFLFEGSNDYYWKIQARGTKTPV--------KATRTQDNFFIIEPPASEMYIGKQIVKTKTI 633
YGE + G+GTYY G G C+ + MYDGMIPVALNAEQY +S MCGAC++G ASG GSG NPIP F AF+ D+CPECQ+GDLDFSMSGDGRWDIEW+FV CP + + F+ +N YYWK+Q RGT TPV A RT DN F + + + G Q V T T+
Sbjct: 104 YGEEYSGEGTYY--GHTTAGMCSFFDDVPEMYDGMIPVALNAEQYGDSLMCGACVEGTASGSGSGNNPIPSTFKAFITDKCPECQKGDLDFSMSGDGRWDIEWKFVACPGEETS----FVSPSANPYYWKVQPRGTTTPVVSLTVDGQSAMRTTDNHFEVHNDGAA-WSGAQTVVTTTV 275
BLAST of mRNA_H-paniculata_contig20678.5371.1 vs. uniprot
Match: D8LGP4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGP4_ECTSI) HSP 1 Score: 175 bits (444), Expect = 9.900e-49 Identity = 86/179 (48.04%), Postives = 113/179 (63.13%), Query Frame = 1
Query: 121 YGETFEGDGTYYSMGDVGGGNCAMHELNLNMYDGMIPVALNAEQYRNSEMCGACIKGKASGEGSGKNPIPEEFMAFVIDQCPECQEGDLDFSMSGDGRWDIEWEFVNCPRGDNNYDPDFLFEGSNDYYWKIQARGTKTPVK--------ATRTQDNFFIIEPPASEMYIGKQIVKTKTI 633
YG TF G+GTYY+ GNC + ++YDGM PVALN QY +S MCGAC++G+ +G GSG +P+ F F++D+CPEC EGDLDF DGRWDI+W+FV CP G+ + F E +YYWKIQ RGT TPV+ A RT DN F +E P+ + + Q+V T T+
Sbjct: 311 YGITFNGEGTYYT--GTSAGNCGFFDDFPSIYDGMTPVALNEPQYGDSLMCGACVEGEGTGGGSGSDPVGT-FKGFIMDKCPECSEGDLDFGTGKDGRWDIKWKFVECPAGE---EVSFKVEQKTEYYWKIQPRGTATPVESLTIGGRAAARTDDNHFELEHPSGDPWYEPQMVVTTTV 483
BLAST of mRNA_H-paniculata_contig20678.5371.1 vs. uniprot
Match: A0A6H5KBW3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBW3_9PHAE) HSP 1 Score: 171 bits (432), Expect = 1.040e-46 Identity = 87/179 (48.60%), Postives = 108/179 (60.34%), Query Frame = 1
Query: 121 YGETFEGDGTYYSMGDVGGGNCAMHELNLNMYDGMIPVALNAEQYRNSEMCGACIKGKASGEGSGKNPIPEEFMAFVIDQCPECQEGDLDFSMSGDGRWDIEWEFVNCPRGDNNYDPDFLFEGSNDYYWKIQARGTKTPVK--------ATRTQDNFFIIEPPASEMYIGKQIVKTKTI 633
YG TFEGDGTYY+ + GNC + ++Y GM PVALNA QY +S MCG+C++G+ +G G G NPI F F++D+CPEC EGDLDF DGRWDIEW FV CP + F YYWKIQ RGT TPV+ A RT DN F +E P+ + Q+V T T+
Sbjct: 348 YGTTFEGDGTYYT--GISAGNCGFFDDFPSIYSGMTPVALNAAQYGDSLMCGSCVEGEGTGGGGGDNPIGT-FKGFIMDKCPECHEGDLDFGTGLDGRWDIEWRFVACP----GEEVSFKVVEMTPYYWKIQPRGTATPVESLTIGGRAAARTDDNHFELEHPSGNPWYEPQMVVTTTV 519
BLAST of mRNA_H-paniculata_contig20678.5371.1 vs. uniprot
Match: A0A1X6NJE1_PORUM (Uncharacterized protein (Fragment) n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NJE1_PORUM) HSP 1 Score: 146 bits (368), Expect = 2.810e-40 Identity = 83/192 (43.23%), Postives = 105/192 (54.69%), Query Frame = 1
Query: 64 ATALCAAMVLPLVAT---APWPYGETFEGDGTYYSMGDVGGGNCAMHELNLNMYDGMIPVALNAEQYRNSEMCGACIKGKASGEGSGKNPIPEEFMAFVIDQCPECQEGDLDFSMSGDGRWDIEWEFVNCPRGDNNYDPDFLFEGSNDYYWKIQARGTKTPVKAT--------RTQDNFFII-------EPP 585
ATAL AA V A A G+T G+GTY+ G GNCA+ L Y G++ VA++ Y S CGAC++ SG+G+G NPI F A+V+D+CPEC GDLD + GDGRW + W V CP P+FL EGSN +Y K+Q RG P + RTQDNFFI+ EPP
Sbjct: 22 ATALLAATVAAAAAAPLGAALRAGQTGAGEGTYF--GPTTRGNCALDPLPAQ-YGGLVGVAVSTADYAGSAACGACLRVTGSGDGAGANPITGTFSAYVMDRCPECAAGDLDLATPGDGRWAVSWTVVPCPTAGGA--PEFLLEGSNPHYLKVQVRGLPAPAASVSVGGAACARTQDNFFIVATAGPPLEPP 208
BLAST of mRNA_H-paniculata_contig20678.5371.1 vs. uniprot
Match: A0A2T7NDP7_POMCA (Expansin-like EG45 domain-containing protein n=1 Tax=Pomacea canaliculata TaxID=400727 RepID=A0A2T7NDP7_POMCA) HSP 1 Score: 134 bits (337), Expect = 2.380e-35 Identity = 74/164 (45.12%), Postives = 89/164 (54.27%), Query Frame = 1
Query: 121 YGETFEGDGTYYSMGDVGGGNCAMHELNLNMYDGM-IPVALNAEQYRNSEMCGACIKGKASGEGSGKNPIPEEFMAFVIDQCPECQEGDLDFSMSGDGRWDIEWEFVNCPRGDNNYDPDFLFEGSNDYYWKIQARGTKTPVKA------------TRTQDNFFI 573
Y TF+GDGTYY GGG C+ N G PVALN+ Q+ NS MCG+C + +G GSG +PI F FV + CPEC GDLD +SGDGRWDI + V CP G N F F+GSN YY K+Q R + PV T T D FF+
Sbjct: 29 YKSTFKGDGTYYGSSG-GGGTCSYGVQNPPAASGTKYPVALNSPQFMNSVMCGSCWRVTGAGTGSGHSPITGTFTVFVDNLCPECHAGDLDLGVSGDGRWDITIQAVQCPVGSGNVQ--FKFQGSNPYYVKLQVRNARLPVHVMEIEQGGSFHAMTHTGDGFFL 189
BLAST of mRNA_H-paniculata_contig20678.5371.1 vs. uniprot
Match: A0A2P6NBD6_9EUKA (Endochitinase-like n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NBD6_9EUKA) HSP 1 Score: 125 bits (315), Expect = 1.410e-29 Identity = 66/160 (41.25%), Postives = 96/160 (60.00%), Query Frame = 1
Query: 127 ETFEGDGTYYSMGDVG-GGNCAMHELNLNMYDGM-IPVALNAEQYRNSEMCGACIKGKASGEGSGKNPIPEEFMAFVIDQCPECQEGDLDFSMSGDGRWDIEWEFVNCPRGDNNYDPDFLFEGSNDYYWKIQARGTKTPVKATRTQDNFFIIEPPASEMY 600
T G TYY GD G GGNC ++ + N+ + + VA+ + + S CG+CI+ SG+G+G NP+ F AFV DQCP C G LDF+ +GDG WDI W+ V+CP G++ + F+GSN++Y K+QAR +TP+ NF I+ P ++ Y
Sbjct: 335 NTQNGKATYY--GDDGTGGNCQIYPVPQNIKSNIDVSVAMVSAYWFGSAACGSCIQITGSGKGAGSNPVKGNFTAFVNDQCPTCVPGGLDFAKNGDGLWDISWKVVDCPVGNSGIY--YAFQGSNEWYMKVQARNHRTPL-------NFISIQDPNTKQY 483
BLAST of mRNA_H-paniculata_contig20678.5371.1 vs. uniprot
Match: A0A2P6NBF0_9EUKA (MAP/microtubule affinity-regulating kinase 3-like n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NBF0_9EUKA) HSP 1 Score: 125 bits (315), Expect = 1.470e-29 Identity = 66/160 (41.25%), Postives = 96/160 (60.00%), Query Frame = 1
Query: 127 ETFEGDGTYYSMGDVG-GGNCAMHELNLNMYDGM-IPVALNAEQYRNSEMCGACIKGKASGEGSGKNPIPEEFMAFVIDQCPECQEGDLDFSMSGDGRWDIEWEFVNCPRGDNNYDPDFLFEGSNDYYWKIQARGTKTPVKATRTQDNFFIIEPPASEMY 600
T G TYY GD G GGNC ++ + N+ + + VA+ + + S CG+CI+ SG+G+G NP+ F AFV DQCP C G LDF+ +GDG WDI W+ V+CP G++ + F+GSN++Y K+QAR +TP+ NF I+ P ++ Y
Sbjct: 728 NTQNGKATYY--GDDGTGGNCQIYPVPQNIKSNIDVSVAMVSAYWFGSAACGSCIQITGSGKGAGSNPVKGNFTAFVNDQCPTCVPGGLDFAKNGDGLWDISWKVVDCPVGNSGIY--YAFQGSNEWYMKVQARNHRTPL-------NFISIQDPNTKQY 876
BLAST of mRNA_H-paniculata_contig20678.5371.1 vs. uniprot
Match: A0A2C9LCA8_BIOGL (Uncharacterized protein n=2 Tax=Biomphalaria glabrata TaxID=6526 RepID=A0A2C9LCA8_BIOGL) HSP 1 Score: 119 bits (297), Expect = 2.580e-29 Identity = 62/149 (41.61%), Postives = 86/149 (57.72%), Query Frame = 1
Query: 127 ETFEGDGTYYSMGDVGGGNCAM-HELNLNMYDGMIP--VALNAEQYRNSEMCGACIKGKASGEGSGKNPIPEEFMAFVIDQCPECQEGDLDFSMSGDGRWDIEWEFVNCPRGDNNYDPDFLFEGSNDYYWKIQARGTKTPVKATRTQDN 564
++++GDGTYY G+ G C + L + D I VALN Q+ NS CG CIK SG G G NPI E + +V D CP C EGD+DF++ GDGRW+I + V CP G + + F+GSN +Y K+Q R + P+ + + N
Sbjct: 34 KSYKGDGTYY--GETVDGTCQIARPLPMAASDPKISALVALNRPQFLNSMTCGMCIKVVGSGHGLGNNPIVGEHIVYVKDMCPVCHEGDVDFALDGDGRWNITMQAVQCPVGSSTIQ--YAFQGSNAWYIKLQIRNARIPITGVQIEKN 178
BLAST of mRNA_H-paniculata_contig20678.5371.1 vs. uniprot
Match: UPI00201F65F1 (uncharacterized protein LOC124131349 isoform X1 n=2 Tax=Haliotis rufescens TaxID=6454 RepID=UPI00201F65F1) HSP 1 Score: 116 bits (291), Expect = 1.730e-28 Identity = 61/140 (43.57%), Postives = 81/140 (57.86%), Query Frame = 1
Query: 127 ETFEGDGTYYSMGDVGGGNCAMHELNLNMYDGMIP--VALNAEQYRNSEMCGACIKGKASGEGSGKNPIPEEFMAFVIDQCPECQEGDLDFSMSGDGRWDIEWEFVNCPRGDNNYDPDFLFEGSNDYYWKIQARGTKTPV 540
+ F GDGTYY D G L + I VALN Q+++S CG C K SG+GSG +PI +F F + CPEC G LDF++SGDGRW+IE + V CP G+ N + + F+G+N YY K+Q R + PV
Sbjct: 26 QKFTGDGTYYGHTDTGMCQYNPPSLPPAALNPKIKYTVALNKPQFQDSFGCGMCFKVHGSGKGSGNSPITGDFFVFANNLCPECHAGSLDFAVSGDGRWNIEIQAVQCPVGNTNIE--YKFQGTNPYYIKLQVRNARIPV 163 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig20678.5371.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig20678.5371.1 >prot_H-paniculata_contig20678.5371.1 ID=prot_H-paniculata_contig20678.5371.1|Name=mRNA_H-paniculata_contig20678.5371.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=201bp MVDVGYNVFATALCAAMVLPLVATAPWPYGETFEGDGTYYSMGDVGGGNCback to top mRNA from alignment at H-paniculata_contig20678:1900..3551- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig20678.5371.1 ID=mRNA_H-paniculata_contig20678.5371.1|Name=mRNA_H-paniculata_contig20678.5371.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1652bp|location=Sequence derived from alignment at H-paniculata_contig20678:1900..3551- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig20678:1900..3551- >mRNA_H-paniculata_contig20678.5371.1 ID=mRNA_H-paniculata_contig20678.5371.1|Name=mRNA_H-paniculata_contig20678.5371.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1206bp|location=Sequence derived from alignment at H-paniculata_contig20678:1900..3551- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |