mRNA_H-paniculata_contig20675.5370.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig20675.5370.1
Unique NamemRNA_H-paniculata_contig20675.5370.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig20675.5370.1 vs. uniprot
Match: D8LSK0_ECTSI (Diacylglycerol O-acyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSK0_ECTSI)

HSP 1 Score: 156 bits (395), Expect = 1.060e-43
Identity = 73/125 (58.40%), Postives = 92/125 (73.60%), Query Frame = 1
Query:   19 VLRVALPSTGTWVLGFYVIFHVFLNLMAEVTRFGDRLFYREWWDCRDIAEYWRLWNLPVHNWIIRHMYVPSKKL-VGPMGALVVSFLFSAVLHEVLASLPFGITKWYAFGGMMGNAFLCPTTQML 390
            +L +A+P+T  W+LGFY  FH+ LNL+AEV RFGDRLFYR+WW+   I  YWRLWNLPVH W+IRH+Y PS +  +    A  + FL SAVLHE+L S+PF + K+YAF GM+GNA L P T ML
Sbjct:  228 LLTLAVPNTYVWLLGFYAFFHLTLNLLAEVLRFGDRLFYRDWWNANTIGSYWRLWNLPVHYWMIRHIYFPSLRAGLSKSMASGLCFLLSAVLHELLVSVPFHMVKFYAFFGMIGNAPLVPLTSML 352          
BLAST of mRNA_H-paniculata_contig20675.5370.1 vs. uniprot
Match: A0A7S2CUJ8_9STRA (Diacylglycerol O-acyltransferase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CUJ8_9STRA)

HSP 1 Score: 146 bits (368), Expect = 2.020e-41
Identity = 63/127 (49.61%), Postives = 90/127 (70.87%), Query Frame = 1
Query:   19 VLRVALPSTGTWVLGFYVIFHVFLNLMAEVTRFGDRLFYREWWDCRDIAEYWRLWNLPVHNWIIRHMYVPSKKL-VGPMGALVVSFLFSAVLHEVLASLPFGITKWYAFGGMMGNAFLCPTTQMLGK 396
            +L++ +P T  W+LGFY+IFH+FLNLMAE+ RFGDR+FY++WW+     +YWRLWNLPVH W++RH+Y P  +       A +  FLFSAV+HE++ S+PF + + Y+FG M+G   L   T+ L K
Sbjct:   50 LLKLTVPVTYIWLLGFYLIFHLFLNLMAEILRFGDRIFYKDWWNATTFDQYWRLWNLPVHYWLVRHLYFPCLRYGFSRANAALAVFLFSAVMHELIVSVPFHMIRLYSFGAMLGQIPLVILTKRLEK 176          
BLAST of mRNA_H-paniculata_contig20675.5370.1 vs. uniprot
Match: A0A7S0CEW1_9STRA (Diacylglycerol O-acyltransferase n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CEW1_9STRA)

HSP 1 Score: 142 bits (359), Expect = 9.450e-39
Identity = 59/129 (45.74%), Postives = 95/129 (73.64%), Query Frame = 1
Query:   16 YVLRVALPSTGTWVLGFYVIFHVFLNLMAEVTRFGDRLFYREWWDCRDIAEYWRLWNLPVHNWIIRHMYVPS-KKL-VGPMGALVVSFLFSAVLHEVLASLPFGITKWYAFGGMMGNAFLCPTTQMLGK 396
            +VL++A+ +T  W++G Y+ FH++LNL+AE+ +FGDR+FY++WW+  D++ YWRLWN+PVH W++RH+Y PS ++L +    A  + F  SAVLHE++ S+PF + +W++F GMMG   L   T+ + K
Sbjct:  182 FVLKLAIANTYCWLIGSYLFFHLYLNLLAEILQFGDRVFYKDWWNSSDVSSYWRLWNMPVHYWLVRHVYFPSIRRLHISKNTASFIVFFVSAVLHEIIISIPFHMIRWWSFLGMMGQIPLVAFTKRIDK 310          
BLAST of mRNA_H-paniculata_contig20675.5370.1 vs. uniprot
Match: A0A7S2S7G3_9STRA (Diacylglycerol O-acyltransferase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S7G3_9STRA)

HSP 1 Score: 140 bits (354), Expect = 1.820e-38
Identity = 60/127 (47.24%), Postives = 90/127 (70.87%), Query Frame = 1
Query:   19 VLRVALPSTGTWVLGFYVIFHVFLNLMAEVTRFGDRLFYREWWDCRDIAEYWRLWNLPVHNWIIRHMYVPSKKL-VGPMGALVVSFLFSAVLHEVLASLPFGITKWYAFGGMMGNAFLCPTTQMLGK 396
            ++++ +P T  W+L FY+ FH+FLNL+ E+ RFGDR+FY++WW+     EYWRLWNLPVH W++RH+Y P  +  +G   A+++ F FSAV HE+L S+PF + ++YAFG M+G   L   T+ L +
Sbjct:  122 LVKLTIPVTYLWLLMFYLFFHLFLNLIGELLRFGDRVFYKDWWNATTFEEYWRLWNLPVHYWMVRHLYFPLLRAGLGRTQAMLLVFTFSAVFHELLVSVPFHMLRFYAFGAMLGQIPLVGITKKLAQ 248          
BLAST of mRNA_H-paniculata_contig20675.5370.1 vs. uniprot
Match: A0A2K3E7S4_CHLRE (Diacylglycerol O-acyltransferase n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A0A2K3E7S4_CHLRE)

HSP 1 Score: 142 bits (359), Expect = 2.370e-38
Identity = 61/129 (47.29%), Postives = 92/129 (71.32%), Query Frame = 1
Query:   19 VLRVALPSTGTWVLGFYVIFHVFLNLMAEVTRFGDRLFYREWWDCRDIAEYWRLWNLPVHNWIIRHMYVPSKKLVGP-MGALVVSFLFSAVLHEVLASLPFGITKWYAFGGMMGNAFLCPTTQMLGKML 402
            VL++ALPST  W+LGFY +FH++LN++AE+TRFGDR FY++WW+   + EYW+LWN+PVH W++RH+Y P+ +       A++++F  SAV HE+L  +P  + + +AF G+M    L   T+ML K L
Sbjct:  156 VLKLALPSTYAWLLGFYCLFHLWLNVLAELTRFGDREFYKDWWNAATVGEYWKLWNMPVHKWLLRHVYFPAIRAGSSRFNAILLTFFVSAVFHELLLGVPLHMVRLWAFAGIMFQVPLIMVTEMLRKKL 284          
BLAST of mRNA_H-paniculata_contig20675.5370.1 vs. uniprot
Match: A0A7S3V9I0_9STRA (Diacylglycerol O-acyltransferase n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V9I0_9STRA)

HSP 1 Score: 146 bits (369), Expect = 2.870e-38
Identity = 65/129 (50.39%), Postives = 92/129 (71.32%), Query Frame = 1
Query:   16 YVLRVALPSTGTWVLGFYVIFHVFLNLMAEVTRFGDRLFYREWWDCRDIAEYWRLWNLPVHNWIIRHMYVPS-KKLVGPMGALVVSFLFSAVLHEVLASLPFGITKWYAFGGMMGNAFLCPTTQMLGKM 399
            Y+L++ + ST  W+L FY  FHVFLN++AEV +FGDR+FYR+WW+  +++ YWRLWNLPVH W++RH+Y P  +  +   GA  + FLFSA++HE++ S+PF + K YAF GMM    L   T+ L KM
Sbjct:  584 YLLKLGITSTYLWLLLFYGFFHVFLNVLAEVLKFGDRVFYRDWWNSSNLSSYWRLWNLPVHYWLVRHLYFPCIRNGISKKGATFMVFLFSAIMHELIISIPFHMIKTYAFLGMMSQIPLIIVTKKLDKM 712          
BLAST of mRNA_H-paniculata_contig20675.5370.1 vs. uniprot
Match: A0A7S2LXF3_9STRA (Diacylglycerol O-acyltransferase (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LXF3_9STRA)

HSP 1 Score: 142 bits (357), Expect = 8.360e-38
Identity = 63/128 (49.22%), Postives = 91/128 (71.09%), Query Frame = 1
Query:   16 YVLRVALPSTGTWVLGFYVIFHVFLNLMAEVTRFGDRLFYREWWDCRDIAEYWRLWNLPVHNWIIRHMYVPSKKL-VGPMGALVVSFLFSAVLHEVLASLPFGITKWYAFGGMMGNAFLCPTTQMLGK 396
            Y+L++++ ST  W+LGFY  FH F+NL AE+ RFGDR+FY++WW+ R+++ YWRLWN+PVH W++RH+Y PS ++     GA  V F FSA+LHEVL S+P    + ++F  MMG   L   T+M+ K
Sbjct:  274 YLLKLSITSTYIWLLGFYGFFHCFMNLTAELLRFGDRVFYQDWWNAREVSAYWRLWNMPVHYWLVRHLYFPSVRVGFSKTGATFVVFFFSAILHEVLISVPCHNLQIWSFLAMMGQLPLIFITKMIDK 401          
BLAST of mRNA_H-paniculata_contig20675.5370.1 vs. uniprot
Match: A0A7S3H3P7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H3P7_9STRA)

HSP 1 Score: 132 bits (332), Expect = 1.190e-37
Identity = 57/95 (60.00%), Postives = 73/95 (76.84%), Query Frame = 1
Query:   37 PSTGTWVLGFYVIFHVFLNLMAEVTRFGDRLFYREWWDCRDIAEYWRLWNLPVHNWIIRHMYVPSKKLVGPMG-ALVVSFLFSAVLHEVLASLPF 318
            P+T  W+LGFY  FH++LN +AE+TRFGDRLFY+EWW+ R I EYWR WN+PVH+W+ RH+Y P  ++    G A +V F FSAVLHEV+ SLPF
Sbjct:    1 PNTYVWLLGFYFFFHLWLNFLAEITRFGDRLFYKEWWNARTIDEYWRTWNMPVHHWVTRHLYFPLIRMGATKGLATLVVFGFSAVLHEVIISLPF 95          
BLAST of mRNA_H-paniculata_contig20675.5370.1 vs. uniprot
Match: A0A835WJ54_9CHLO (Diacylglycerol O-acyltransferase n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835WJ54_9CHLO)

HSP 1 Score: 145 bits (365), Expect = 1.230e-37
Identity = 62/129 (48.06%), Postives = 93/129 (72.09%), Query Frame = 1
Query:   19 VLRVALPSTGTWVLGFYVIFHVFLNLMAEVTRFGDRLFYREWWDCRDIAEYWRLWNLPVHNWIIRHMYVPSKKLVGP-MGALVVSFLFSAVLHEVLASLPFGITKWYAFGGMMGNAFLCPTTQMLGKML 402
            VL++ALPST  W+LGFY +FH++LN++AE+TRFGDR FY++WW+   + EYW+LWN+PVH W++RH+Y P+ +       A++++F  SAV HE+L  +P  + + +AFGG+M    L   T+ML K L
Sbjct:  682 VLKLALPSTYAWLLGFYCLFHLWLNVLAELTRFGDREFYKDWWNAATVGEYWKLWNMPVHKWLLRHVYFPAIRAGSSRFNAILLTFFVSAVFHELLLGVPLHMVRLWAFGGIMFQVPLIMVTEMLRKKL 810          
BLAST of mRNA_H-paniculata_contig20675.5370.1 vs. uniprot
Match: B8BTU5_THAPS (Diacylglycerol O-acyltransferase (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BTU5_THAPS)

HSP 1 Score: 140 bits (353), Expect = 2.960e-37
Identity = 62/128 (48.44%), Postives = 91/128 (71.09%), Query Frame = 1
Query:   16 YVLRVALPSTGTWVLGFYVIFHVFLNLMAEVTRFGDRLFYREWWDCRDIAEYWRLWNLPVHNWIIRHMYVPSKKL-VGPMGALVVSFLFSAVLHEVLASLPFGITKWYAFGGMMGNAFLCPTTQMLGK 396
            Y+L++++ ST  W+LGFY  FH F+NL AE+ RFGDR+FYR+WW+  +++ YWRLWN+PVH W++RH+Y P  ++ +   GA  V F FSAVLHEVL S+P  + + ++F  MMG   L   T+++ K
Sbjct:  277 YLLKLSITSTYIWLLGFYGFFHCFMNLAAELLRFGDRVFYRDWWNASEVSAYWRLWNMPVHYWLVRHVYFPCIRVGMSKKGATFVVFFFSAVLHEVLISVPCHMIRAWSFLAMMGQIPLIILTKIIDK 404          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig20675.5370.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LSK0_ECTSI1.060e-4358.40Diacylglycerol O-acyltransferase n=1 Tax=Ectocarpu... [more]
A0A7S2CUJ8_9STRA2.020e-4149.61Diacylglycerol O-acyltransferase n=1 Tax=Dictyocha... [more]
A0A7S0CEW1_9STRA9.450e-3945.74Diacylglycerol O-acyltransferase n=1 Tax=Proboscia... [more]
A0A7S2S7G3_9STRA1.820e-3847.24Diacylglycerol O-acyltransferase n=1 Tax=Rhizochro... [more]
A0A2K3E7S4_CHLRE2.370e-3847.29Diacylglycerol O-acyltransferase n=1 Tax=Chlamydom... [more]
A0A7S3V9I0_9STRA2.870e-3850.39Diacylglycerol O-acyltransferase n=2 Tax=Chaetocer... [more]
A0A7S2LXF3_9STRA8.360e-3849.22Diacylglycerol O-acyltransferase (Fragment) n=1 Ta... [more]
A0A7S3H3P7_9STRA1.190e-3760.00Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A835WJ54_9CHLO1.230e-3748.06Diacylglycerol O-acyltransferase n=1 Tax=Chlamydom... [more]
B8BTU5_THAPS2.960e-3748.44Diacylglycerol O-acyltransferase (Fragment) n=1 Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig20675contigH-paniculata_contig20675:2044..3527 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score140.2
Seed ortholog evalue7e-31
Seed eggNOG ortholog35128.Thaps261279
Preferred nameDGAT1
KEGG rclassRC00004,RC00041
KEGG koko:K00635,ko:K11155
KEGG ReactionR02251,R02366,R02367,R08381
KEGG Pathwayko00561,ko00830,ko01100,ko04975,map00561,map00830,map01100,map04975
KEGG ModuleM00089
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0001101,GO:0001775,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0002790,GO:0003006,GO:0003674,GO:0003824,GO:0003846,GO:0004144,GO:0005488,GO:0005504,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0005811,GO:0005886,GO:0005975,GO:0006091,GO:0006139,GO:0006163,GO:0006629,GO:0006637,GO:0006638,GO:0006639,GO:0006641,GO:0006662,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006887,GO:0006950,GO:0006955,GO:0006970,GO:0006996,GO:0007154,GO:0007267,GO:0007275,GO:0007568,GO:0008104,GO:0008150,GO:0008152,GO:0008289,GO:0008374,GO:0008610,GO:0008611,GO:0009058,GO:0009117,GO:0009150,GO:0009259,GO:0009266,GO:0009306,GO:0009409,GO:0009507,GO:0009526,GO:0009536,GO:0009628,GO:0009651,GO:0009719,GO:0009725,GO:0009737,GO:0009743,GO:0009746,GO:0009749,GO:0009790,GO:0009791,GO:0009793,GO:0009889,GO:0009891,GO:0009893,GO:0009914,GO:0009941,GO:0009987,GO:0010029,GO:0010030,GO:0010033,GO:0010154,GO:0010565,GO:0010817,GO:0010866,GO:0010867,GO:0010876,GO:0010883,GO:0010888,GO:0010941,GO:0012505,GO:0012506,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0016192,GO:0016411,GO:0016740,GO:0016746,GO:0016747,GO:0017144,GO:0018904,GO:0019216,GO:0019217,GO:0019222,GO:0019432,GO:0019637,GO:0019693,GO:0019747,GO:0019915,GO:0019992,GO:0022414,GO:0022607,GO:0023052,GO:0023061,GO:0030072,GO:0030073,GO:0030141,GO:0030656,GO:0030659,GO:0030667,GO:0031090,GO:0031224,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031406,GO:0031410,GO:0031967,GO:0031975,GO:0031982,GO:0031984,GO:0032368,GO:0032501,GO:0032502,GO:0032879,GO:0032940,GO:0033036,GO:0033293,GO:0033865,GO:0033875,GO:0033993,GO:0034032,GO:0034284,GO:0034377,GO:0034379,GO:0034389,GO:0034641,GO:0034698,GO:0035336,GO:0035337,GO:0035383,GO:0035579,GO:0036094,GO:0036155,GO:0036230,GO:0042119,GO:0042175,GO:0042221,GO:0042581,GO:0042592,GO:0042886,GO:0042981,GO:0043062,GO:0043067,GO:0043167,GO:0043168,GO:0043177,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043299,GO:0043312,GO:0043603,GO:0043900,GO:0043933,GO:0044057,GO:0044058,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044433,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0044752,GO:0045017,GO:0045055,GO:0045184,GO:0045321,GO:0045477,GO:0045595,GO:0045834,GO:0045923,GO:0045995,GO:0046320,GO:0046321,GO:0046339,GO:0046460,GO:0046463,GO:0046483,GO:0046485,GO:0046486,GO:0046504,GO:0046879,GO:0046889,GO:0046890,GO:0046903,GO:0048316,GO:0048518,GO:0048519,GO:0048522,GO:0048580,GO:0048582,GO:0048608,GO:0048731,GO:0048856,GO:0048878,GO:0050789,GO:0050793,GO:0050794,GO:0050795,GO:0050801,GO:0050865,GO:0050867,GO:0050896,GO:0051049,GO:0051094,GO:0051179,GO:0051186,GO:0051234,GO:0051235,GO:0051239,GO:0051240,GO:0055081,GO:0055086,GO:0055088,GO:0055089,GO:0060259,GO:0060284,GO:0061458,GO:0062012,GO:0062013,GO:0065003,GO:0065005,GO:0065007,GO:0065008,GO:0070925,GO:0071702,GO:0071704,GO:0071705,GO:0071825,GO:0071827,GO:0071840,GO:0071944,GO:0072521,GO:0080090,GO:0090207,GO:0090208,GO:0097006,GO:0097305,GO:0097384,GO:0097708,GO:0098588,GO:0098805,GO:0098827,GO:0099503,GO:0140042,GO:1900140,GO:1901135,GO:1901360,GO:1901503,GO:1901564,GO:1901568,GO:1901576,GO:1901700,GO:1901738,GO:1902224,GO:1903998,GO:1904478,GO:1904729,GO:1904748,GO:1905879,GO:1905952,GO:1905953,GO:2000026,GO:2000241,GO:2000489,GO:2000491
EggNOG free text desc.Belongs to the membrane-bound acyltransferase family
EggNOG OGs2XD8R@2836,COG5056@1,KOG0380@2759
EC2.3.1.20,2.3.1.75,2.3.1.76
COG Functional cat.I
Best tax levelBacillariophyta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons4
Model size402
Cds size402
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig20675.5370.1prot_H-paniculata_contig20675.5370.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig20675 2044..3527 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929539.9684236-CDS-H-paniculata_contig20675:2043..21211622929539.9684236-CDS-H-paniculata_contig20675:2043..2121Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig20675 2044..2121 -
1691480904.8755152-CDS-H-paniculata_contig20675:2043..21211691480904.8755152-CDS-H-paniculata_contig20675:2043..2121Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig20675 2044..2121 -
1622929539.9822826-CDS-H-paniculata_contig20675:2309..24261622929539.9822826-CDS-H-paniculata_contig20675:2309..2426Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig20675 2310..2426 -
1691480904.886255-CDS-H-paniculata_contig20675:2309..24261691480904.886255-CDS-H-paniculata_contig20675:2309..2426Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig20675 2310..2426 -
1622929539.9960902-CDS-H-paniculata_contig20675:2926..30281622929539.9960902-CDS-H-paniculata_contig20675:2926..3028Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig20675 2927..3028 -
1691480904.8942058-CDS-H-paniculata_contig20675:2926..30281691480904.8942058-CDS-H-paniculata_contig20675:2926..3028Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig20675 2927..3028 -
1622929540.0087302-CDS-H-paniculata_contig20675:3422..35271622929540.0087302-CDS-H-paniculata_contig20675:3422..3527Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig20675 3423..3527 -
1691480904.902212-CDS-H-paniculata_contig20675:3422..35271691480904.902212-CDS-H-paniculata_contig20675:3422..3527Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig20675 3423..3527 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig20675.5370.1

>prot_H-paniculata_contig20675.5370.1 ID=prot_H-paniculata_contig20675.5370.1|Name=mRNA_H-paniculata_contig20675.5370.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=134bp
MPNLFYVLRVALPSTGTWVLGFYVIFHVFLNLMAEVTRFGDRLFYREWWD
CRDIAEYWRLWNLPVHNWIIRHMYVPSKKLVGPMGALVVSFLFSAVLHEV
LASLPFGITKWYAFGGMMGNAFLCPTTQMLGKML
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mRNA from alignment at H-paniculata_contig20675:2044..3527-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig20675.5370.1 ID=mRNA_H-paniculata_contig20675.5370.1|Name=mRNA_H-paniculata_contig20675.5370.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1484bp|location=Sequence derived from alignment at H-paniculata_contig20675:2044..3527- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCCCAATCTGTTCTATGTGCTGAGGGTGGCACTGCCCAGCACGGGGAC TTGGGTGCTTGGGTTCTACGTCATTTTCCACGTTTTTCTCAACCTCATGG CTGAGGTATAGTATAATCTGTCTATACACGAGTAATGTCTTGTTGCCTTT TCCGGAAGCTGCATCCGAGTCTGCACATAATCGGAAACAAGGTAATTTAC TACCTGAGCTATTCCCTAATGCACTGACGTGATGATGATGGTGGTGGTGA TGATGATGATGCTGTTGGTGGGTGACGTTGTTGTTAGTGGTGGTGGTAGT CTGGGGGGCGAATAAGTTATATGAGCTATTGACCTGCCTACAGGTAACAC GGGGTCTGAGGCCACTAGCCCACTGGCCTACGAGTGGGTGTATATATATG TATACTCTGATATTCTTATATTACGCCCCAATCACCCATACGTTATCGAC GGGACTCTGTTCAGTCGTGTCATCGTACGCTCGTTCTTTTCTTCTCAAGG TCACAAGGTTCGGGGACCGTTTATTCTACCGAGAGTGGTGGGACTGCAGA GATATCGCTGAATATTGGCGCCTCTGGAACCTCCCAGTTCACAATTGGAT CGTGAGTTCGTTGCAGACAAATATGGTTTGGGGCGCGGGTAGTGGGGGCG CGCGGGGGGGGACTCAGTAAAATTTGAAATATCTGAGGGATCGATAAATG TCGTTATAGAGAGGGTCAGCCGTTCTTACAAGATAATTGATAATCACCCG TTGCAAAGAGAGTACATCTCTGCATGAGAATAATCTTTTATCAGAAGTAG CATTAAAAACATTCACAGGTACACAAAGTGACAACGCCTCAAGAAAAACC AGAACGGCAACTTGACCTTCAAGCCTTTGTCTACTCCATCTACTACCCAC ATCTGACTCCACAGCTTTGTATTAAATGCACCTTTTGAGGCTCTTAGCTG GTAATAGTTTTGTTGCAAGTATGCTTAATGGCGAGTATCACCTATTACTG CAACGCTATAGATTGTAATTCTGCGTGGTATTATTTTCTTTTCTTTGCTC TTCTTGTTGTCCCCTCCACCCGCCCCGTGATCGCGGCCGGTGTCGAGATA GATCCGGCATATGTATGTACCGTCGAAGAAGCTGGTTGGTCCGATGGGGG CCTTGGTCGTCAGTTTCCTGTTTTCAGCCGTGCTTCACGAGGTTCTGGCG TCTCTACCATTTGGGATAGTGAGTCAGGGAGGGAGTCGAACGTTCGCCTT GCGGAGTGGACGTCACAGAGGGTGTTTTCCCTCTGTTTGTTTATTTATAG AGTTATTGTTTTAGATCGTCACGAGCAAGATATCTCACACGGACAGCTTG TACTCTTCTTGCTTGCTCACCTGCTACGTCGTAAATTCATTATTGTGATC GAACAGACCAAATGGTACGCTTTTGGCGGCATGATGGGAAACGCCTTTTT ATGCCCCACCACCCAGATGTTGGGCAAGATGCTG
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Coding sequence (CDS) from alignment at H-paniculata_contig20675:2044..3527-

>mRNA_H-paniculata_contig20675.5370.1 ID=mRNA_H-paniculata_contig20675.5370.1|Name=mRNA_H-paniculata_contig20675.5370.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=804bp|location=Sequence derived from alignment at H-paniculata_contig20675:2044..3527- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCCCAATCTGTTCTATGTGCTGAGGGTGGCACTGCCCAGCACGGGGAC
TTGGGTGCTTGGGTTCTACGTCATTTTCCACGTTTTTCTCAACCTCATGG
CTGAGATGCCCAATCTGTTCTATGTGCTGAGGGTGGCACTGCCCAGCACG
GGGACTTGGGTGCTTGGGTTCTACGTCATTTTCCACGTTTTTCTCAACCT
CATGGCTGAGGTCACAAGGTTCGGGGACCGTTTATTCTACCGAGAGTGGT
GGGACTGCAGAGATATCGCTGAATATTGGCGCCTCTGGAACCTCCCAGTT
CACAATTGGATCGTCACAAGGTTCGGGGACCGTTTATTCTACCGAGAGTG
GTGGGACTGCAGAGATATCGCTGAATATTGGCGCCTCTGGAACCTCCCAG
TTCACAATTGGATCATCCGGCATATGTATGTACCGTCGAAGAAGCTGGTT
GGTCCGATGGGGGCCTTGGTCGTCAGTTTCCTGTTTTCAGCCGTGCTTCA
CGAGGTTCTGGCGTCTCTACCATTTGGGATAATCCGGCATATGTATGTAC
CGTCGAAGAAGCTGGTTGGTCCGATGGGGGCCTTGGTCGTCAGTTTCCTG
TTTTCAGCCGTGCTTCACGAGGTTCTGGCGTCTCTACCATTTGGGATAAC
CAAATGGTACGCTTTTGGCGGCATGATGGGAAACGCCTTTTTATGCCCCA
CCACCCAGATGTTGGGCAAGATGCTGACCAAATGGTACGCTTTTGGCGGC
ATGATGGGAAACGCCTTTTTATGCCCCACCACCCAGATGTTGGGCAAGAT
GCTG
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