prot_H-paniculata_contig2067.5367.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2067.5367.1
Unique Nameprot_H-paniculata_contig2067.5367.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length1391
Homology
BLAST of mRNA_H-paniculata_contig2067.5367.1 vs. uniprot
Match: D7FR15_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR15_ECTSI)

HSP 1 Score: 601 bits (1549), Expect = 4.980e-191
Identity = 301/540 (55.74%), Postives = 394/540 (72.96%), Query Frame = 0
Query:    7 MSTNGVETVWVHYTSDGDDLGD--------SLCWSREWEQAYCVSANDVSMCNGIICSGAPTQEIIPTGEIPSVELADWENDTYIRPSYSITPTVRNLNGWVRVAGGNEFDVSDRDYVIGIILAAAPLFVFGFIVACCCLPVGHIAAGSKQHHVDGEGFFGCLCPARCKQGDFIASGTLAIVVAFTILTLIGGAMAIYGVRSVDADVVNLWENLDGMGGDMVTAQTRLDEIYERMVRVESSFPTVASCSGLPSLEAAASGVSSAEGSLGELV-DANIGSVGQSIQVVNEDIKATADVRRGIVYSAGGLVLVMSIVYVVVGHYALAKDDGNGKDGGARMRGPVVIGCLFLPLTLLVILTCWFLFGLSTSFSLFTADFCMAPTEHTTGVFEDPGDKEVVSFYTSCSGTNVFSSALSTAFIQATAAKELVASVDDDIFAASCLNETATKAALELDMDAILMEIDAMGYLIQCGKVNPYFVNGVEGSLCHDAPEKVWFVTGGFAVVSVSLLVVAIAFRLLLQQKEEGLYRVVFEEDLSLSRSSS 537
            M + G+++ W+ +TS+G+  G         SLCW+ E    YCV+ +D     G+    A     +  G++P   + +WE D Y+RP Y+++ TV  L+GWVRV+G NEFD+S+RDYVIGIILAA P+F+FGFIVACCCLPVGH+AA SKQHH+DG GFFGC CPARCK+GDF+ SGTL +VV FTI+T+IGGA AIYGVRSVD  +VNL  +L+ +G  M  AQT +D IY  +  VE SF  V+SCS + SLE   +G+ SA+ ++ EL+ D  +GSV  +I  + E+   T   RRG+VY+AG LVLVMS+VYV VG+YAL KDDG GK GGARMRGPV+IGCL LPLTLLVIL CWFLFG+STS +L T+DFC+ P+ H T  F  P D+E+V++YTSC G N FS  L TA++Q +AA+ L+ ++DDD FA  C +E  +K  L+ ++  IL +ID++GYL+QCG VNPYFV GVE +LC DAP+ +WFV  GFAVVSV L VVA++FRLLLQQKEEGLY+V+FE+++  S +SS
Sbjct:    1 MQSAGLDSAWIDHTSEGESGGSGSSASGEPSLCWTHEGGSEYCVATSD-----GVCADVADPVTEVADGQLPDFLVREWEEDDYVRPDYTLSSTVEALHGWVRVSGDNEFDLSERDYVIGIILAAVPVFIFGFIVACCCLPVGHVAASSKQHHLDGGGFFGCFCPARCKRGDFMGSGTLGVVVFFTIVTIIGGAAAIYGVRSVDGQLVNLVSSLEDIGQAMGEAQTGVDSIYTLLTNVELSFEEVSSCSLVSSLEGVEAGIESAKLAVEELIEDDQLGSVSTNILELEEEFSNTQTTRRGVVYAAGALVLVMSVVYVSVGYYALGKDDGRGKAGGARMRGPVLIGCLILPLTLLVILLCWFLFGVSTSVALLTSDFCVDPSGHATEAFSKPADQELVAYYTSCEGANTFSDQLVTAYLQGSAAQGLLDALDDDEFATECPDEVESKETLDENIVLILAQIDSLGYLVQCGSVNPYFVEGVEEALCTDAPDAIWFVICGFAVVSVGLFVVAVSFRLLLQQKEEGLYKVIFEDEIEASETSS 535          
BLAST of mRNA_H-paniculata_contig2067.5367.1 vs. uniprot
Match: A0A6H5JJC9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJC9_9PHAE)

HSP 1 Score: 607 bits (1565), Expect = 3.390e-187
Identity = 304/540 (56.30%), Postives = 401/540 (74.26%), Query Frame = 0
Query:    7 MSTNGVETVWVHYTSDGDDLGD--------SLCWSREWEQAYCVSANDVSMCNGIICSGAPTQEIIPTGEIPSVELADWENDTYIRPSYSITPTVRNLNGWVRVAGGNEFDVSDRDYVIGIILAAAPLFVFGFIVACCCLPVGHIAAGSKQHHVDGEGFFGCLCPARCKQGDFIASGTLAIVVAFTILTLIGGAMAIYGVRSVDADVVNLWENLDGMGGDMVTAQTRLDEIYERMVRVESSFPTVASCSGLPSLEAAASGVSSAEGSLGELV-DANIGSVGQSIQVVNEDIKATADVRRGIVYSAGGLVLVMSIVYVVVGHYALAKDDGNGKDGGARMRGPVVIGCLFLPLTLLVILTCWFLFGLSTSFSLFTADFCMAPTEHTTGVFEDPGDKEVVSFYTSCSGTNVFSSALSTAFIQATAAKELVASVDDDIFAASCLNETATKAALELDMDAILMEIDAMGYLIQCGKVNPYFVNGVEGSLCHDAPEKVWFVTGGFAVVSVSLLVVAIAFRLLLQQKEEGLYRVVFEEDLSLSRSSS 537
            +S+ G+++ W+ +TS+G+  G         SLCW+ E    YCV+ +D     G+    A     +  G++P   + +WE D Y+RP Y+++ TV+ L+GWVRV+G NEFD+S+RDYVIGIILAA P+FVFGFIVACCCLPVGH+AA SKQHH+DG GFFGCLCPARCK+GDF+ SGTL +VV FTI+T+IGGA+AIYGV+SVD +VVNL  +L+ +G  M  AQT +D IY  +V VESSF  V+SCS + SLE   +G+ SA+ ++ EL+ D  +GSV  +I  + E+   T   RRG+VY+AG LVLVMS+VYV VG YAL KDDG GKDGGARMRGPV+IGCL LPLTLLVIL CWFLFG+STS +L T+DFC+ P+ H T  F    D+E+V++YTSC G N FS  L TA++Q +AA+ L+ ++DDD FA  C +E  +K  L+ ++  IL +ID++GYL+QCG VNP+FV GVE +LC DAP+ +WFV  GFAVVSV L VVA++FRLLLQQKEEGLY+V+FE++++ S +SS
Sbjct:  502 LSSAGLDSAWIDHTSEGESGGSGSSASGGSSLCWTHEGGSEYCVATSD-----GVCADVADPVTEVADGQLPDFLVREWEEDDYVRPDYTLSSTVQTLHGWVRVSGDNEFDLSERDYVIGIILAAVPVFVFGFIVACCCLPVGHVAASSKQHHLDGGGFFGCLCPARCKRGDFMGSGTLGVVVFFTIVTIIGGAVAIYGVQSVDGEVVNLVSSLEDIGQAMGEAQTGVDSIYTLLVNVESSFEEVSSCSLVSSLEGVEAGIESAKLAVEELIEDDQLGSVSTNILELEEEFSNTQTTRRGVVYAAGALVLVMSVVYVSVGFYALGKDDGRGKDGGARMRGPVLIGCLILPLTLLVILLCWFLFGVSTSVALLTSDFCVDPSGHATEAFSKAADQELVAYYTSCEGANTFSDQLVTAYLQGSAAQGLLDALDDDEFATECPDEVESKETLDENIVLILAQIDSLGYLVQCGSVNPFFVEGVEKALCTDAPDAIWFVICGFAVVSVGLFVVAVSFRLLLQQKEEGLYKVIFEDEIAASETSS 1036          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2067.5367.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FR15_ECTSI4.980e-19155.74Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JJC9_9PHAE3.390e-18756.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006990TweetyPFAMPF04906Tweetycoord: 344..492
e-value: 1.8E-10
score: 40.0
IPR006990TweetyPANTHERPTHR12424TWEETY-RELATEDcoord: 85..513
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 515..1390
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 142..176
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..114
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 489..514
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 361..488
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 199..297
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 177..198
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 339..360
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 115..141
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 320..338
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 298..319
NoneNo IPR availableTMHMMTMhelixcoord: 489..511
NoneNo IPR availableTMHMMTMhelixcoord: 297..319
NoneNo IPR availableTMHMMTMhelixcoord: 121..143
NoneNo IPR availableTMHMMTMhelixcoord: 339..361
NoneNo IPR availableTMHMMTMhelixcoord: 176..198

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2067contigH-paniculata_contig2067:4797..20296 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2067.5367.1mRNA_H-paniculata_contig2067.5367.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2067 516..22308 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2067.5367.1 ID=prot_H-paniculata_contig2067.5367.1|Name=mRNA_H-paniculata_contig2067.5367.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1391bp
MALRRAMSTNGVETVWVHYTSDGDDLGDSLCWSREWEQAYCVSANDVSMC
NGIICSGAPTQEIIPTGEIPSVELADWENDTYIRPSYSITPTVRNLNGWV
RVAGGNEFDVSDRDYVIGIILAAAPLFVFGFIVACCCLPVGHIAAGSKQH
HVDGEGFFGCLCPARCKQGDFIASGTLAIVVAFTILTLIGGAMAIYGVRS
VDADVVNLWENLDGMGGDMVTAQTRLDEIYERMVRVESSFPTVASCSGLP
SLEAAASGVSSAEGSLGELVDANIGSVGQSIQVVNEDIKATADVRRGIVY
SAGGLVLVMSIVYVVVGHYALAKDDGNGKDGGARMRGPVVIGCLFLPLTL
LVILTCWFLFGLSTSFSLFTADFCMAPTEHTTGVFEDPGDKEVVSFYTSC
SGTNVFSSALSTAFIQATAAKELVASVDDDIFAASCLNETATKAALELDM
DAILMEIDAMGYLIQCGKVNPYFVNGVEGSLCHDAPEKVWFVTGGFAVVS
VSLLVVAIAFRLLLQQKEEGLYRVVFEEDLSLSRSSSLDGQNPSIFAADG
SDKQKSRRGDRSGRSVIVAIPIKETSPFDTAAASTNGINHLTGDLSGVPT
LSSSTASGTGSSTLSPLAGGVSSLHQATWGQLEKSDRRRPVESMMPRPRA
GLNVFPIGYRQQKARANPLEPSSHPTSPTQSTDVKIMVNGHGPEGSELGP
RVSSRASTTTTTTTQRPGVAGDVSVSRSKRDDSAKDDGNAFYSEGKESNA
RHGAALAGGGVKRASVQPDPSSIGGTSSSYFSRFDANGHRQSGGTESAFS
RYSGGGGGGGAISGVDSSGSKKQKTSRLFRALAGLDDPDIDEAPSVIVSR
SSTRHGSRNLADGGDDDGPDTITFMVARAGTVVSRASTHGDVDDNRVSGR
NIAGNGQADNYDLNDDHDSDYDVPGLVDSDCREGDDRKHGSVSIGVGSSR
GSGRVNGSGRASTSRRGSNSGRIRAPNYLYASEQGTWAAVAKEIRRDSVL
SISSSHTLPRSLRNGEGEGDGHDVSGRSCHHYPRSSSTASTDVVVSGADD
AAPAHGGPEVPGFVEKEGEDEGVLSSTASGLSTGWRRPRAQIKTAAHRSR
ERSSSADGPRPSQQVFQRVEAGEDSGLSAAAAAVTDVGVRGGGSEGGVDA
QEHPSMSRGVEYRAAGRSLKSREKQSPLHVRYDGTACEKRQEEQRSRTAS
RERDEERSMPSSQDRRGGQSTTPTAAATTHWSAKHMNAFMQQQRQPMRVL
PVAASPTLPIDSTGAHGRARRRGAAVPSGTKSGILGLDALSHRPTDDGRP
MKQHMDGGRDGGDRSRNVGDDRSRNVGDDRSRSVDDDRARRRTPIAGSLA
ESPRRNARIAASSPRSLANKDSNRAIISRRSRGRRTPAPK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006990Tweety