mRNA_H-paniculata_contig20641.5363.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig20641.5363.1
Unique NamemRNA_H-paniculata_contig20641.5363.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig20641.5363.1 vs. uniprot
Match: A0A7N2KXD4_QUELO (Uncharacterized protein n=1 Tax=Quercus lobata TaxID=97700 RepID=A0A7N2KXD4_QUELO)

HSP 1 Score: 115 bits (287), Expect = 9.240e-23
Identity = 67/173 (38.73%), Postives = 104/173 (60.12%), Query Frame = 3
Query:  657 LRSDYKLKDLGDARYYLGCHITPDKQKRKLKIDQHLYARSTVERFGI--IKTIMLPSIAENNTMINNDGPKTSEEAEEIRVFPYREAVGALMWAATMTRSDIPRAVRTTAKFCENLGVAHNRAVVKILQYLLRTADLGIAYDGQDCGVEMVAYADSDYPSNSRWRRW*TKYCF 1169
            L S++++KD+G+A Y LG  I  D+ K+ L + Q  Y +  +ERF +   K I  P +A+N ++  +  PKT +E E++   PY  AVG+LM+A   TR DI  AV   ++F  N G+AH +AV +IL+YL  TAD  + Y G D  + M+ Y+D+D+ S+   R+  + Y F
Sbjct: 1342 LSSNFEMKDMGEADYILGVKILRDRSKKLLGLSQQTYIKKVLERFQMHNCKPIDTP-VAKNESLSLDMCPKTQDEKEKMASVPYANAVGSLMYAMMCTRPDICYAVGLVSRFQSNPGLAHWKAVKRILRYLKGTADYILCYQGSD--LRMIDYSDADWGSDLDERKSTSGYAF 1511          
BLAST of mRNA_H-paniculata_contig20641.5363.1 vs. uniprot
Match: A0A1Y1LYU4_PHOPY (Uncharacterized protein (Fragment) n=1 Tax=Photinus pyralis TaxID=7054 RepID=A0A1Y1LYU4_PHOPY)

HSP 1 Score: 114 bits (286), Expect = 1.030e-22
Identity = 64/184 (34.78%), Postives = 107/184 (58.15%), Query Frame = 3
Query:  624 DPKSWTSCVADLRSDYKLKDLGDARYYLGCHITPDKQKRKLKIDQHLYARSTVERFGI--IKTIMLPSIAENNTMINNDGPKTSEEAEEIRVFPYREAVGALMWAATMTRSDIPRAVRTTAKFCENLGVAHNRAVVKILQYLLRTADLGIAYDGQDCGVEMVAYADSDYPSNSRWRRW*TKYCF 1169
            D  + T     L S++K+KD+G+AR+ LG  IT D++ +K+ +DQ  Y  S +++F +     +  P++      IN   P + +EAE++   PY+EAVG+L++AA ++R DI  AV   +++  N G+ H  A  +I++YL  T    + +DGQ    +++ YADSD+ +N   RR  T Y F
Sbjct:  835 DVTAKTRLKNQLMSEFKVKDIGEARFVLGMQITRDRKNKKIWLDQQSYVESLLKKFKMWDCNPVDTPALLGEKLSINMC-PNSEDEAEKMSRVPYQEAVGSLLFAAQVSRPDISFAVNNVSRYTRNPGLTHWTATKRIMRYLRGTIQYKLEFDGQRSS-QVIGYADSDWANNVDDRRSITGYAF 1016          
BLAST of mRNA_H-paniculata_contig20641.5363.1 vs. uniprot
Match: A0A2N9G1Z4_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9G1Z4_FAGSY)

HSP 1 Score: 114 bits (284), Expect = 1.530e-22
Identity = 65/173 (37.57%), Postives = 102/173 (58.96%), Query Frame = 3
Query:  657 LRSDYKLKDLGDARYYLGCHITPDKQKRKLKIDQHLYARSTVERFGI--IKTIMLPSIAENNTMINNDGPKTSEEAEEIRVFPYREAVGALMWAATMTRSDIPRAVRTTAKFCENLGVAHNRAVVKILQYLLRTADLGIAYDGQDCGVEMVAYADSDYPSNSRWRRW*TKYCF 1169
            L S++++KD+G+A Y LG  I  D+ K+ L + Q  Y +  +ERF +   K I  P IA+N ++  N  PKT +E E++   PY  A+G+LM+A   TR DI   V   ++F  N G+AH +AV +IL+YL  T D  + Y G D  + ++ Y+D+D+ S+   R+  + Y F
Sbjct:  699 LSSNFEMKDMGEADYILGVKIFRDRSKKILGLSQQTYVKKVLERFQMSDCKPINTP-IAKNESLSQNMCPKTQDEQEKMARVPYANAIGSLMYAMMCTRPDICYVVGLVSRFQSNPGLAHWKAVKRILRYLNGTIDYVLCYQGSD--LRLIGYSDADWGSDLDERKSTSGYAF 868          
BLAST of mRNA_H-paniculata_contig20641.5363.1 vs. uniprot
Match: A0A2P4Y945_9STRA (Integrase catalytic core protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y945_9STRA)

HSP 1 Score: 110 bits (276), Expect = 4.700e-22
Identity = 60/172 (34.88%), Postives = 98/172 (56.98%), Query Frame = 3
Query:  642 SCVADLRSDYKLKDLGDARYYLGCHITPDKQKRKLKIDQHLYARSTVERFGIIKTIMLPSIAENNTMIN---NDGPKTSEEAEEIRVFPYREAVGALMWAATMTRSDIPRAVRTTAKFCENLGVAHNRAVVKILQYLLRTADLGIAYDGQDCGVEMVAYADSDYPSNSRWRR 1148
            S  A +   +++KDLG AR+  G  I  D +++ L I Q  Y  S + +FG  +    PS+   +  ++    D P++ ++  +++  PYR  VG+LM+ A  TR DI  AV   +++ EN G  H  A +K+++YLL+T D+ I YDG+  G E+ AY+D+D+  N   RR
Sbjct:  205 SVKAGISGQFRIKDLGRARFIFGIEINYDMERKALTISQRAYTESIINKFG--QENAKPSLTPLDPSVHLTKADEPQSDDDKAKMKSKPYRSLVGSLMYLACETRPDIAVAVAKLSRYLENPGQRHWDAGIKVVRYLLKTKDVAITYDGR-MGTELTAYSDADWTGNRDDRR 373          
BLAST of mRNA_H-paniculata_contig20641.5363.1 vs. uniprot
Match: A0A6A3JDE6_9STRA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3JDE6_9STRA)

HSP 1 Score: 112 bits (280), Expect = 4.730e-22
Identity = 63/171 (36.84%), Postives = 99/171 (57.89%), Query Frame = 3
Query:  642 SCVADLRSDYKLKDLGDARYYLGCHITPDKQKRKLKIDQHLYARSTVERFGI--IKTIMLPSIAENNTMINNDGPKTSEEAEEIRVFPYREAVGALMWAATMTRSDIPRAVRTTAKFCENLGVAHNRAVVKILQYLLRTADLGIAYDGQDCGVEMVAYADSDYPSNSRWRR 1148
            S  A +  ++++KDLG AR+ LG  I  D ++R L I Q  Y  S +++FG    K  + P +  +  +   D P+T E+  +++  PYR  VG+LM+ A  TR DI  AV   ++F EN G  H  A +K+++YLL+T D+ I Y+G   G ++ AY+D+D+  N   RR
Sbjct:  597 SVKAGIAENFRIKDLGRARFILGIEIDYDMERRTLGISQKAYTESIIKKFGQENAKPCLTP-LEPSVQLTKADEPQTEEDKAKMKSKPYRSLVGSLMYLACGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVSIVYEGL-LGTQLEAYSDADWAGNRDDRR 765          
BLAST of mRNA_H-paniculata_contig20641.5363.1 vs. uniprot
Match: A0A6A3KFS5_9STRA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3KFS5_9STRA)

HSP 1 Score: 112 bits (280), Expect = 4.940e-22
Identity = 63/171 (36.84%), Postives = 99/171 (57.89%), Query Frame = 3
Query:  642 SCVADLRSDYKLKDLGDARYYLGCHITPDKQKRKLKIDQHLYARSTVERFGI--IKTIMLPSIAENNTMINNDGPKTSEEAEEIRVFPYREAVGALMWAATMTRSDIPRAVRTTAKFCENLGVAHNRAVVKILQYLLRTADLGIAYDGQDCGVEMVAYADSDYPSNSRWRR 1148
            S  A +  ++++KDLG AR+ LG  I  D ++R L I Q  Y  S +++FG    K  + P +  +  +   D P+T E+  +++  PYR  VG+LM+ A  TR DI  AV   ++F EN G  H  A +K+++YLL+T D+ I Y+G   G ++ AY+D+D+  N   RR
Sbjct:  645 SVKAGIAENFRIKDLGRARFILGIEIDYDMERRTLGISQKAYTESIIKKFGQENAKPCLTP-LEPSVQLTKADEPQTEEDKAKMKSKPYRSLVGSLMYLACGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVSIVYEGL-LGTQLEAYSDADWAGNRDDRR 813          
BLAST of mRNA_H-paniculata_contig20641.5363.1 vs. uniprot
Match: UPI0014482594 (secreted RxLR effector protein 161-like n=1 Tax=Nicotiana tomentosiformis TaxID=4098 RepID=UPI0014482594)

HSP 1 Score: 103 bits (258), Expect = 2.280e-21
Identity = 63/179 (35.20%), Postives = 96/179 (53.63%), Query Frame = 3
Query:  657 LRSDYKLKDLGDARYYLGCHITPDKQKRKLKIDQHLYARSTVERFGI------IKTIMLPSIAENNTMINNDGPKTSEEAEEIRVFPYREAVGALMWAATMTRSDIPRAVRTTAKFCENLGVAHNRAVVKILQYLLRTADLGIAYDGQDCGVEMVAYADSDYPSNSRWRRW*TKYCFYF 1175
            L+ ++++KDLG+A+  LG  I  D++ +KL + Q  Y +  ++RFGI      I T + P    + TM     PK   E E +   PY   VG+LM A   TR DI +AV   +++  N G  H +AV  IL+Y+  T D+G+ ++ Q+    +V Y DSD+  +   RR  T Y F F
Sbjct:   18 LKEEFEMKDLGEAKKILGMEIIRDRRSKKLCLSQKEYLKRVLQRFGIDKKTKPISTPLAPHFKLSTTM----SPKDETEQEYMSRVPYANVVGSLMHAMVCTRPDISQAVGVISRYIHNPGNEHWQAVKWILRYIHSTVDVGLVFE-QEGNRSVVGYCDSDFAGDLDKRRSITGYVFTF 191          
BLAST of mRNA_H-paniculata_contig20641.5363.1 vs. uniprot
Match: UPI001131AAB8 (Ty1/Copia family RNAse HI domain-containing protein n=1 Tax=Escherichia coli TaxID=562 RepID=UPI001131AAB8)

HSP 1 Score: 104 bits (259), Expect = 1.020e-20
Identity = 60/176 (34.09%), Postives = 96/176 (54.55%), Query Frame = 3
Query:  657 LRSDYKLKDLGDARYYLGCHITPDKQKRKLKIDQHLYARSTVERFGI---IKTIMLPSIAENNTMINNDGPKTSEEAEEIRVFPYREAVGALMWAATMTRSDIPRAVRTTAKFCENLGVAHNRAVVKILQYLLRTADLGIAYDGQDCGVEMVAYADSDYPSNSRWRRW*TKYCFYF 1175
            L+ ++++KDLG+A+  LG  I  D++ +KL + Q  Y +  ++RFGI    K +  P +A +  +     P    E E +   PY   VG+LM+A   TR DI +AV   +++  N G  H +AV  IL+Y+  T D+G+ ++ +D    +V Y DSD+  +   RR  T Y F F
Sbjct:   49 LKKEFEMKDLGEAKKILGMEIIRDRRSKKLCLSQKEYLKRVLQRFGIDDKTKPVSTP-LASHFKLSTTMSPMDEAEREYMSKVPYANVVGSLMYAMVCTRPDISQAVGVISRYMHNPGKEHWQAVKWILRYIHNTVDVGLVFEQED-NQSVVGYCDSDFAGDLDKRRSTTGYVFTF 222          
BLAST of mRNA_H-paniculata_contig20641.5363.1 vs. uniprot
Match: A0A6A3J8V8_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3J8V8_9STRA)

HSP 1 Score: 102 bits (254), Expect = 1.510e-19
Identity = 54/165 (32.73%), Postives = 86/165 (52.12%), Query Frame = 3
Query:  657 LRSDYKLKDLGDARYYLGCHITPDKQKRKLKIDQHLYARSTVERFGIIKTIMLPSIAENNTMINN-DGPKTSEEAEEIRVFPYREAVGALMWAATMTRSDIPRAVRTTAKFCENLGVAHNRAVVKILQYLLRTADLGIAYDGQDCGVEMVAYADSDYPSNSRWRR 1148
            L+S +K+K+LG+A++ LG  I  D+    L + Q  Y    V RF       + +  E    ++    P T  E E++R  PY+  +G+L++  T TR D+   V   ++F EN G  H +A +++L+YL  T D GI Y G +    +  Y D+D+ SN   RR
Sbjct:  126 LKSAFKMKELGEAKFILGMEIDHDRTTGTLMVKQTRYVDDVVNRFNQQDAKAVVNPCETGMKLSKTQSPATDAEREDMRGKPYKSLIGSLLYITTCTRPDVAYIVTQLSQFLENPGQQHWKAAIRVLRYLKTTKDFGIVYSGNNGKAVLEVYTDADWGSNLDGRR 290          
BLAST of mRNA_H-paniculata_contig20641.5363.1 vs. uniprot
Match: A0A151RYL1_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151RYL1_CAJCA)

HSP 1 Score: 103 bits (258), Expect = 2.510e-19
Identity = 60/174 (34.48%), Postives = 96/174 (55.17%), Query Frame = 3
Query:  657 LRSDYKLKDLGDARYYLGCHITPDKQKRKLKIDQHLYARSTVERFGII---KTIMLPSIAENNTMINNDGPKTSEEAEEIRVFPYREAVGALMWAATMTRSDIPRAVRTTAKFCENLGVAHNRAVVKILQYLLRTADLGIAYDGQDCGVEMVAYADSDYPSNSRWRRW*TKYCF 1169
            L  ++++KDLG+A+  LG  I+ D++  +L + Q  Y +  ++RFGI    K +  P +A +  +  N  P+ + E   +   PY  AVG+LM+A   TR DI  AV   +++  N G  H +AV  IL+Y+L T D+G+ +  +  G  +V Y DS+Y  +   RR  T Y F
Sbjct:  798 LNGEFEMKDLGEAKKILGMEISRDRKLGRLCLTQKEYLKRVLKRFGISDESKPVSTP-LASHFKLSANLSPRDAAEKAYMSKVPYASAVGSLMYAMVCTRPDISYAVGVVSRYMHNPGKEHWQAVKWILRYILNTVDVGLVFQQEQDGQNVVGYCDSNYAGDLDNRRSTTGYVF 970          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig20641.5363.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7N2KXD4_QUELO9.240e-2338.73Uncharacterized protein n=1 Tax=Quercus lobata Tax... [more]
A0A1Y1LYU4_PHOPY1.030e-2234.78Uncharacterized protein (Fragment) n=1 Tax=Photinu... [more]
A0A2N9G1Z4_FAGSY1.530e-2237.57Uncharacterized protein n=1 Tax=Fagus sylvatica Ta... [more]
A0A2P4Y945_9STRA4.700e-2234.88Integrase catalytic core protein n=1 Tax=Phytophth... [more]
A0A6A3JDE6_9STRA4.730e-2236.84Retrovirus-related Pol polyprotein from transposon... [more]
A0A6A3KFS5_9STRA4.940e-2236.84Retrovirus-related Pol polyprotein from transposon... [more]
UPI00144825942.280e-2135.20secreted RxLR effector protein 161-like n=1 Tax=Ni... [more]
UPI001131AAB81.020e-2034.09Ty1/Copia family RNAse HI domain-containing protei... [more]
A0A6A3J8V8_9STRA1.510e-1932.73Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A151RYL1_CAJCA2.510e-1934.48Retrovirus-related Pol polyprotein from transposon... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig20641contigH-paniculata_contig20641:1051..3038 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score86.3
Seed ortholog evalue1e-14
Seed eggNOG ortholog67593.Physo130920
Hectar predicted targeting categoryother localisation
EggNOG free text desc.transposition, RNA-mediated
EggNOG OGs3QH7N@4776,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
Exons2
Model size1873
Cds size345
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig20641.5363.1prot_H-paniculata_contig20641.5363.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig20641 1860..2319 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929539.0385919-UTR-H-paniculata_contig20641:1050..18591622929539.0385919-UTR-H-paniculata_contig20641:1050..1859Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig20641 1051..1859 +
1691480904.4696023-UTR-H-paniculata_contig20641:1050..18591691480904.4696023-UTR-H-paniculata_contig20641:1050..1859Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig20641 1051..1859 +
1622929539.1172187-UTR-H-paniculata_contig20641:2319..30381622929539.1172187-UTR-H-paniculata_contig20641:2319..3038Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig20641 2320..3038 +
1691480904.5003953-UTR-H-paniculata_contig20641:2319..30381691480904.5003953-UTR-H-paniculata_contig20641:2319..3038Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig20641 2320..3038 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929539.0539415-CDS-H-paniculata_contig20641:1859..21741622929539.0539415-CDS-H-paniculata_contig20641:1859..2174Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig20641 1860..2174 +
1691480904.4813685-CDS-H-paniculata_contig20641:1859..21741691480904.4813685-CDS-H-paniculata_contig20641:1859..2174Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig20641 1860..2174 +
1622929539.0695179-CDS-H-paniculata_contig20641:2289..23191622929539.0695179-CDS-H-paniculata_contig20641:2289..2319Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig20641 2290..2319 +
1691480904.4911013-CDS-H-paniculata_contig20641:2289..23191691480904.4911013-CDS-H-paniculata_contig20641:2289..2319Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig20641 2290..2319 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig20641.5363.1

>prot_H-paniculata_contig20641.5363.1 ID=prot_H-paniculata_contig20641.5363.1|Name=mRNA_H-paniculata_contig20641.5363.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=115bp
MLPSIAENNTMINNDGPKTSEEAEEIRVFPYREAVGALMWAATMTRSDIP
RAVRTTAKFCENLGVAHNRAVVKILQYLLRTADLGIAYDGQDCGVEMVAY
ADSDYPSNSRWRRW*
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mRNA from alignment at H-paniculata_contig20641:1051..3038+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig20641.5363.1 ID=mRNA_H-paniculata_contig20641.5363.1|Name=mRNA_H-paniculata_contig20641.5363.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1988bp|location=Sequence derived from alignment at H-paniculata_contig20641:1051..3038+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
TTTAGAAGGAACAGTCACGTCTTCGTAATGGTCAGCAGCGTGCGTCAGGG CACAACAACATTGGAACGGCCATTGATTAGTTTAAAGATTCCATGCGCGA GCGCTTTCCAAGTGAATTCGAGGTAGCAAGTCAACCACACGATAGACGCG GCTAACCTGGCATGAGAATTCCCTGAGGCGTTCCTCTGATGCTTCGACAG ATAGGTTGTACTGGTGTAGAAGTGTCTCGCCAACGGGCACCGTCAGATCA AGGACGTCCACTTCCAGGAAGCTTCTTCTCCTGCACCTGTAGTGGTCAGC ACAAAAAAGATATTTTCGCTTGCGGCAATCCAGGACTAGGAGCTTCGGCA CGTCGAATTTGAACAAGCGTATCTGCAGACGCCCATCGTTCAGGAGATTC TCGTCGAAGTTTCCGTAGAATACCGGGAGTTCCCCGGAGCGGTGGGGCGC CTCGACAAGGCAATCTACGGATTGATGCAAGCCGGTAGATCCTCGAGTAT GAAGGTTACCGCGGACGTCATGGCGAAAGAGTTTGAGCAATCGCACGCCG ACCCGTGCGTATTCCGCATGATCGTGGACGCGGAGGTGGTCGCACTGATC ATCATATACGTAGACGACCAAGGGACCCGAAATCATGGACGAGTTGCGTG GCGGACTTGCGATCGGATTACAAGCTTAAAGATCTGGGAGATGCAAGGTA CTATTTAGGATGCCACATCACCCCCGATAAACAAAAGAGGAAGCTCAAGA TCGACCAGCACCTCTACGCGAGGTCCACGGTCGAGCGTTTCGGGATAATC AAGACCATCATGCTCCCGTCCATAGCGGAAAACAATACCATGATAAACAA CGACGGGCCGAAGACCTCAGAGGAAGCCGAGGAGATACGAGTTTTCCCAT ACAGGGAGGCAGTGGGGGCGCTCATGTGGGCGGCGACAATGACCCGATCC GACATCCCACGCGCCGTACGCACTACGGCAAAGTTCTGTGAGAACCTAGG AGTGGCGCACAATAGAGCTGTGGTGAAGATTCTGCAGTACTTATTAAGGA CCGCGGACCTGGGAATCGCCTACGACGGACAGGACTGCGGGGTCGAAATG GTGGCTTACGCTGACTCGGACTACGCAACGCGCCAGAACAGTTAACGCTC AGTATCCGGCGGAGCGGTACTGCTGGAGGGGGGCGCTATCAGTTGGCACT CAAGGATTCAGCAGGTAACGGCGGCGGGGACAACAGAAGCCGAGTAATTC ACGTTGGCGGAGATGGTGAACGAAGTACTGTTTCTACTTCAAGTACAAGC GTTCATAATGCCAACGCTGGAACACTCCCCCGTAATAATTAGGGAAGGCA ATCAAGGAGCTGAAAAGATGGCCCACAATAAGCTCAGCAGTCGGAGGACG CGTCACATCGACGTAAAGAACCACATTGTTCGCGATGCGGTTGAGGCTGG GAAGGCTGACGTAGTCTATGTGGGGACGGGAGAGCAGCGCGCGGACGTAC TCACGAAGGCGCTGCGGAGGCGTTCTTTTGAGAAGCACGTAAACGCGTTG ATGAATGTTGTGTATTTCCGCGAATAACGCGAATACAAAGAAAGCGAAAT TATTTGTGAATGTTACAATTACATGGAACAATAAATTTTGTTAAATGAAA TCAGATACCGCACGAAGTAGAAACGTACGTTAGCGAAGCAGTACCCTGTA GAGCAAGTGGGGGTGTTAGAGTTGTGTGCTCTACGGAATACTGTGCGATT GGTATTAGTAACAGCAGTAGTACAAATACAGTATCATGTTGTGATGAGTA TGTGTAGCACAAAATGCGATGCGGAGAAATACAGTAGGAGTTTGGCGCTT GCCGCTCGGTACATTTCCGAAGTGGAACGTCTCCAGAATTATGTGCGGAT AGTTCTCAAATTTCAATTTCGGAGATGTTCTTCCATATGTTTATAGATCG ATGAAGGAGAGAGAGCCACCTAACCCCACTTCCATTTC
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Coding sequence (CDS) from alignment at H-paniculata_contig20641:1051..3038+

>mRNA_H-paniculata_contig20641.5363.1 ID=mRNA_H-paniculata_contig20641.5363.1|Name=mRNA_H-paniculata_contig20641.5363.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=690bp|location=Sequence derived from alignment at H-paniculata_contig20641:1051..3038+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCTCCCGTCCATAGCGGAAAACAATACCATGATAAACAACGACGGGCC
GAAGACCTCAGAGGAAGCCGAGGAGATACGAGTTTTCCCATACAGGGAGG
CAGTGGGGGCGCTCATGTGGGCGGCGACAATGACCCGATCCGACATCCCA
CGCGCCGTACGCACTACGGCAAAGTTCTGTGAGAACCTAGGAGTGGCGCA
CAATAGAGCTGTGGTGAAGATTCTGCAGTACTTATTAAGGACCGCGGACC
TGGGAATCGCCTACGACGGACAGGACTGCGGGGTCGAAATGGTGGCTTAC
GCTGACTCGGACTACATGCTCCCGTCCATAGCGGAAAACAATACCATGAT
AAACAACGACGGGCCGAAGACCTCAGAGGAAGCCGAGGAGATACGAGTTT
TCCCATACAGGGAGGCAGTGGGGGCGCTCATGTGGGCGGCGACAATGACC
CGATCCGACATCCCACGCGCCGTACGCACTACGGCAAAGTTCTGTGAGAA
CCTAGGAGTGGCGCACAATAGAGCTGTGGTGAAGATTCTGCAGTACTTAT
TAAGGACCGCGGACCTGGGAATCGCCTACGACGGACAGGACTGCGGGGTC
GAAATGGTGGCTTACGCTGACTCGGACTACCCGAGTAATTCACGTTGGCG
GAGATGGTGACCGAGTAATTCACGTTGGCGGAGATGGTGA
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