mRNA_H-paniculata_contig2063.5358.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig2063.5358.1 vs. uniprot
Match: A0A6H5J8Z2_9PHAE (Lipase_3 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J8Z2_9PHAE) HSP 1 Score: 112 bits (279), Expect = 9.340e-28 Identity = 48/78 (61.54%), Postives = 59/78 (75.64%), Query Frame = 1
Query: 1 RLVHHRDPVPHLPFTSWGYTHPSTEVFYSYNQTTYVVCDETGEDPSCSNQFWVLPNFAYISDHLHYLEVEYPKAYLNC 234
RLVHHRDPVPHLP +WGY HP TEVFY+ +Q++Y VC+++GED +CSNQFW + F I DHL YL V Y AY+ C
Sbjct: 285 RLVHHRDPVPHLPLEAWGYHHPPTEVFYTEDQSSYQVCNKSGEDDTCSNQFWAI--FGNIEDHLWYLVVNYSTAYMQC 360
BLAST of mRNA_H-paniculata_contig2063.5358.1 vs. uniprot
Match: A0A7S3C3K0_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3C3K0_9EUKA) HSP 1 Score: 85.9 bits (211), Expect = 3.480e-19 Identity = 39/67 (58.21%), Postives = 46/67 (68.66%), Query Frame = 1
Query: 1 RLVHHRDPVPHLPFTSWGYTHPSTEVFYSYNQTTYVVCDETGEDPSCSNQFWVLPNFAYISDHLHYL 201
RL HHRDPVPH+P S G+ H TEVFY + +Y VCD +GED SCSNQ+W + ISDHL YL
Sbjct: 116 RLTHHRDPVPHVPLQSMGFQHVGTEVFYDEDNDSYKVCDGSGEDSSCSNQYWAETS---ISDHLSYL 179
BLAST of mRNA_H-paniculata_contig2063.5358.1 vs. uniprot
Match: A0A7S1JE99_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1JE99_9EUGL) HSP 1 Score: 85.1 bits (209), Expect = 4.440e-18 Identity = 42/72 (58.33%), Postives = 47/72 (65.28%), Query Frame = 1
Query: 1 RLVHHRDPVPHLPFTSWGYTHPSTEVFYSYNQTTYVVCDETGEDPSCSNQFWVLPNFAYISDHLHYLEVEYP 216
RL H RDPVPHLP TS GY HPS+EVFY N T Y+VC+ +GEDP CS QF V I DH Y+ V P
Sbjct: 228 RLTHWRDPVPHLPPTSLGYRHPSSEVFYDENSTNYLVCNRSGEDPDCSAQFSVS---LAIQDHQDYMGVHTP 296
BLAST of mRNA_H-paniculata_contig2063.5358.1 vs. uniprot
Match: A0A4D9D459_9STRA (Lipase_3 domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D459_9STRA) HSP 1 Score: 83.2 bits (204), Expect = 8.930e-18 Identity = 38/69 (55.07%), Postives = 54/69 (78.26%), Query Frame = 1
Query: 1 RLVHHRDPVPHLPFTSWGYTHPSTEVFYSYNQTTYVVCDETGEDPSCSNQFWVLPNFAYISDHLHYLEV 207
RLVH+RDPVPHLP ++G+ H EVFY+ +QT+Y+VC+++GEDP CS+QF V + ++DHL+YL V
Sbjct: 166 RLVHNRDPVPHLPPRAFGFHHQPFEVFYNEDQTSYIVCNDSGEDPQCSDQFLVDLD---VADHLNYLGV 231
BLAST of mRNA_H-paniculata_contig2063.5358.1 vs. uniprot
Match: A0A4D9CWF0_9STRA (Lipase_3 domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CWF0_9STRA) HSP 1 Score: 82.8 bits (203), Expect = 2.650e-17 Identity = 38/67 (56.72%), Postives = 48/67 (71.64%), Query Frame = 1
Query: 1 RLVHHRDPVPHLPFTSWGYTHPSTEVFYSYNQTTYVVCDETGEDPSCSNQFWVLPNFAYISDHLHYL 201
RLVHHRDPVPHLP S+G+ H EVFY+ N+T Y +CD TGED CS+ + + P+ I DHL+YL
Sbjct: 187 RLVHHRDPVPHLPPASFGFHHSPFEVFYTKNETYYHICDATGEDKHCSDHYLIDPS---IKDHLNYL 250
BLAST of mRNA_H-paniculata_contig2063.5358.1 vs. uniprot
Match: W7U0K9_9STRA (Lipase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U0K9_9STRA) HSP 1 Score: 82.0 bits (201), Expect = 1.800e-16 Identity = 38/69 (55.07%), Postives = 53/69 (76.81%), Query Frame = 1
Query: 1 RLVHHRDPVPHLPFTSWGYTHPSTEVFYSYNQTTYVVCDETGEDPSCSNQFWVLPNFAYISDHLHYLEV 207
RLVHHRDPVPHLP ++G+ H EVFY+ +QT+Y+VC+++GED CS+QF V + ++DHL+YL V
Sbjct: 510 RLVHHRDPVPHLPPRAFGFHHQPFEVFYNEDQTSYIVCNDSGEDLQCSDQFLVDLD---VADHLNYLGV 575
BLAST of mRNA_H-paniculata_contig2063.5358.1 vs. uniprot
Match: A0A7S1TVG0_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TVG0_9STRA) HSP 1 Score: 79.7 bits (195), Expect = 4.450e-16 Identity = 36/78 (46.15%), Postives = 49/78 (62.82%), Query Frame = 1
Query: 1 RLVHHRDPVPHLPFTSWGYTHPSTEVFYSYNQTTYVVCDETGEDPSCSNQFWVLPNFAYISDHLHYLEVEYPKAYLNC 234
R+ HH+DPVP +P ++G+ H STEV+Y Y VCD TGEDP CSNQ+ + N+ DHL YL ++ Y+ C
Sbjct: 208 RITHHKDPVPQMPPAAFGFHHESTEVYYDKFNDDYKVCDGTGEDPECSNQWLLNGNWR---DHLTYLGEDFVAQYMTC 282
BLAST of mRNA_H-paniculata_contig2063.5358.1 vs. uniprot
Match: A0A5A8CJH8_CAFRO (Lipase_3 domain-containing protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CJH8_CAFRO) HSP 1 Score: 73.6 bits (179), Expect = 7.590e-14 Identity = 35/69 (50.72%), Postives = 47/69 (68.12%), Query Frame = 1
Query: 1 RLVHHRDPVPHLPFTSWGYTHPSTEVFYSYNQTTYVVCDETGEDPSCSNQFWVLPNFAYISDHLHYLEV 207
R+VH++D VPHLPF G+ H EV+++ QT+Y VCD TGEDP+CS+ + A ISDHL YL +
Sbjct: 210 RVVHYKDIVPHLPFEWMGFHHSPREVWFNEAQTSYQVCDGTGEDPNCSDSLTIA---ASISDHLDYLNL 275
BLAST of mRNA_H-paniculata_contig2063.5358.1 vs. uniprot
Match: A0A7S1C3Q8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C3Q8_9STRA) HSP 1 Score: 71.6 bits (174), Expect = 3.840e-13 Identity = 28/53 (52.83%), Postives = 39/53 (73.58%), Query Frame = 1
Query: 1 RLVHHRDPVPHLPFTSWGYTHPSTEVFYSYNQTTYVVCDETGEDPSCSNQFWV 159
R+VHH+D +PHLP S G+ H STE++ + T YVVCD +GEDP+CS+ W+
Sbjct: 218 RVVHHKDIIPHLPLESMGFWHTSTEIWSNEQATAYVVCDGSGEDPTCSDSVWL 270
BLAST of mRNA_H-paniculata_contig2063.5358.1 vs. uniprot
Match: A0A5A8DIP6_CAFRO (Lipase_3 domain-containing protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DIP6_CAFRO) HSP 1 Score: 63.2 bits (152), Expect = 2.980e-11 Identity = 26/50 (52.00%), Postives = 37/50 (74.00%), Query Frame = 1
Query: 1 RLVHHRDPVPHLPFTSWGYTHPSTEVFYSYNQTTYVVCDETGEDPSCSNQ 150
R+VH++D VPHLPF G+ H EV+++ QT+Y VCD TGEDP+C+ +
Sbjct: 48 RVVHYKDIVPHLPFEWMGFHHSPREVWFNEAQTSYQVCDGTGEDPNCATR 97 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2063.5358.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2063.5358.1 >prot_H-paniculata_contig2063.5358.1 ID=prot_H-paniculata_contig2063.5358.1|Name=mRNA_H-paniculata_contig2063.5358.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=78bp RLVHHRDPVPHLPFTSWGYTHPSTEVFYSYNQTTYVVCDETGEDPSCSNQback to top mRNA from alignment at H-paniculata_contig2063:3381..3614+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2063.5358.1 ID=mRNA_H-paniculata_contig2063.5358.1|Name=mRNA_H-paniculata_contig2063.5358.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=234bp|location=Sequence derived from alignment at H-paniculata_contig2063:3381..3614+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2063:3381..3614+ >mRNA_H-paniculata_contig2063.5358.1 ID=mRNA_H-paniculata_contig2063.5358.1|Name=mRNA_H-paniculata_contig2063.5358.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=468bp|location=Sequence derived from alignment at H-paniculata_contig2063:3381..3614+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |