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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 3653 |
| Cds size | 1497 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2062.5355.1 >prot_H-paniculata_contig2062.5355.1 ID=prot_H-paniculata_contig2062.5355.1|Name=mRNA_H-paniculata_contig2062.5355.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=499bp
MCTTTHQEAVVGGDGSSSSGYSYTVRVKARGSVAVVSLRCPAIAELQASI
ASAFELVLLPTHKGMSLSYLHPGGGKAFLDDDMDLLLALTHWRSCPALTV
TAVFAEDNTDLPIPESISGLYHEAAEHLRSSHGVTSITPVSLRQAVALLN
LPPRRLVTQGLAPHWSLKAQQSPPLSQQQTEAATALPEEDNNADLMSEHE
YVSDTESEDGDDLDDNTVVVEEVEYDSTPSAVTLAVPAAGDLSIGYDQQQ
EEESTTKASNFAIDAAPSAAQSSPSETLDRGDTQVEQASSPSSESVISGD
FTHAAAASNSTIATFTETSPLHAALVAGGVSIHPHETDALIHALGVDPPR
LVHLGLVKQEIAHAVPTTATDICARPRRSVSRPAGARKPKTIRVPVRLAG
SKRRGARSSSSANTNDIFANLIRKSGKLVGEGVVVPWPQLAVSTTAPSQR
LRVQTIRGMGSASSRKGMQVRAFSRHGARDNGPASRRQRIVSNPNAGV* back to topmRNA from alignment at H-paniculata_contig2062:10066..15070- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig2062.5355.1 ID=mRNA_H-paniculata_contig2062.5355.1|Name=mRNA_H-paniculata_contig2062.5355.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5005bp|location=Sequence derived from alignment at H-paniculata_contig2062:10066..15070- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATCAACTCTATCAACAGATTGTTTGCCAACTTGCCCACGCTCTGCCCCCC
CAGTGCAGTCACGTCTTCTTTTCCCACCTTTTTTTGTACGCCGACACCGA
CTCACAGCAACCGAGAAATATGTGCACTACAACACACCAGGAGGCGGTTG
TTGGTGGTGATGGGAGCAGCAGCAGTGGGTATTCGTACACGGTGCGGGTG
AAAGCCCGGGGTAGCGTTGCAGTCGTGAGCCTGAGATGTCCTGCAATCGC
CGAGCTGCAGGCAAGCATCGCTTCAGCGTTCGAGCTGGTACTGTTACCGA
CGCACAAGGGTATGTCCTTAAGCTACTTGCATCCTGGCGGAGGAAAGGCC
TTCCTCGACGACGACATGGACTTGCTTCTGGCTCTCACTCACTGGCGGAG
CTGCCCTGCCCTCACCGTGACGGCTGTTTTTGCTGAAGACAACACAGACG
TGAGAGTTGTGCAAATCATTATGCGAACTTTGAAGTTTGTTCATACGGTG
GTGAAAAAAAATGGAACTGAACCCTGCGACATACACTGAATGAAATATAA
TTGATCGTGTTGTGGGGTTTGAGGCGTCATCTAGTTGCTTGCTGGCACAA
ATTTCTGTCACTGAAGTGCGTGCAAAGGTGCACATAACAGATAGCTTCAG
TGCTACAGATCTTGTTCATGTTTCGTTCGAATCTTCCGTGTACGCGCGTG
GAAACCCACAATTGATATGAGATGAGAGATAATGGGCGCCAGATTTCAGA
GAGCCGAGAATTTACAGAGAGTAGTACAACGCATCTCGGTCTTACGTTGG
ATTTCGCCGCTGTTTGGCCGGGTCTCAATTGTTCAGTCGTGGCAGTCTAC
GTGATCTTGTAGTCTTAACAGGGTAAACCAATAGCTACCCTAACGTAAAC
GCTTCACGTCGGGGCAGTCATCTCTAGGCTGCAGCAGTGCTATTGTGATT
TCGGCTGGTGCTCCGGCTGGTGCTTCCGCGACTTCACGTGAAGAGTGAAG
AGTGAAGAGTTTCAAAAATCTTTGAGCCGCTCGTGTGTAAGATATAACGT
TTCAAATTTAAACAACAACCAGTGAGCCATATCCACCACACCTAGAGATG
AAGGGCACGCTCAACTCTCGAACAGACCGTACAGCGGTCAAGTCATGTTG
TCCTATCATTCTATCGCCATGCTAAGCGTACTCGATGGCAGTCTCGTCAG
CAGCAGCAGTATATCCCTCGGGTCAGTTCTTTACAGGCCGCACCAGTTCC
GACTCTTTGAAACAATTTACCGCAGACGTCTTAGACCCCGTCATGCCTCG
AATAATTAATTATCCATGTTGAATATTACACGAGTCCGATCGTTCGATTC
CGTCACGTAGAGTCCCGAACGGGCTAAGGCCACGGCTTTACATTATCAAA
ACTTGTATTCAAACTACCATTGTGTAATGGGCAGGCCCGGTCTGCGCGAG
CGCGACCAGTCGCTTTTCGTTGAAAAACTAAACAGCCGCCGCACTTTATT
TACCTCACTTGTCACAATTCGCGCCCATCTCTAGGATGCAGTCTGGAAGG
ACGTTGTACTAGAGCCTTCGGCGTAAAACGGCCCTCAAGGCGGGCTCGGA
GAATGCATATCACTTGTATTGACGGTGCAATTTGATACATCATTTTTTTC
AGTCTTCTCCACGGCTCCAATCTGTTGTGGGACGTGTTATCAAATATCTT
GTTCGCTTGACTAACTTGAGATTATGTCCCTCCTTTTCCTTCTCCCCATA
CACCCGTGCCCAACACAATATTCCTGGTGCACGACGAAAAAAATACGACA
GTTACCAATCCCGGAGAGTATCTCAGGACTCTACCACGAGGCTGCTGAGC
ACCTGCGTTCGTCTCACGGCGTCACGTCCATTACCCCGGTCAGCCTCAGG
CAGGCGGTGGCTCTTCTCAACCTGCCGCCGCGCCGCCTGGTCACGCAGGG
CCTAGCCCCTCACTGGTCGCTCAAGGCCCAGCAATCACCCCCGCTGTCTC
AACAGCAGACTGAGGCAGCGACGGCATTGCCCGAAGAGGATAACAACGCC
GATCTCATGAGCGAGCACGAGTATGTTTCGGACACTGAAAGCGAAGACGG
CGACGACCTTGACGACAATACAGTAGTAGTGGAAGAGGTTGAATATGACA
GCACGCCCAGCGCCGTAACCCTCGCGGTTCCCGCGGCCGGAGATTTGTCC
ATTGGATATGACCAGCAACAGGAAGAGGAATCTACGACAAAAGCTTCAAA
CTTCGCAATCGATGCTGCCCCGTCGGCGGCGCAGTCGTCACCTTCGGAGA
CCCTTGACCGCGGCGATACACAAGTTGAGCAGGCCAGTTCGCCATCGAGT
GAAAGCGTTATCTCCGGAGATTTCACCCACGCCGCGGCCGCCTCGAACTC
CACCATCGCCACCTTCACTGAGACAAGTCCTCTCCATGCGGCCCTTGTTG
CCGGCGGTGTATCCATCCACCCGCACGAAACTGATGCGCTGATCCACGCG
CTAGGAGTGGACCCCCCGCGGCTGGTTCATCTAGGTCTAGTTAAGCAGGA
AATCGCCCACGCCGTTCCTACCACAGCTACTGATATCTGTGCTAGGCCCC
GCCGCTCTGTCAGTCGTCCGGCTGGGGCGCGCAAACCCAAGACGATCCGA
GTACCCGTCCGCCTCGCGGGTTCGAAGCGCCGCGGGGCCCGCAGCAGCAG
CAGCGCCAACACCAACGACATATTTGCCAACCTTATAAGAAAGTCTGGAA
AGCTTGTTGGAGAAGGTGTCGTCGTGCCGTGGCCGCAACTGGCGGTGTCT
ACCACAGCCCCGTCTCAACGCCTTCGCGTGCAAACGATTCGCGGGATGGG
GAGCGCCTCCAGTCGGAAGGGCATGCAGGTTCGCGCCTTCAGTCGCCACG
GAGCTCGCGACAACGGTCCCGCTAGTCGCCGGCAAAGAATCGTGAGTAAC
CCTAATGCTGGCGTCTGACTCTTGTTCACTGTTTTATGGGTAGTTCAAAT
GATATGTAGGGTTGAGCAAGTGATGGCCGCAGAGATACGGGGGGTTTCGC
GATATTGGGAACAGTTTCTTCCGCCCTGGGCTTGAAGCCAAGGAACAATG
ACTGTTGGATGTGGGTGTGCACGCATTCGTCTGTATTGATATATCTTCCT
TCAGTCGTTGTCCCTTGGGAACGGCTTGTGGCATGCGTGTATAGAGAGAG
CTCAAAAGTGAGAACAAAAGAGGGACATGGTAAGGTCAACTTCCGGGGGC
AGGAGAGGATACATAAATTATAATTATAGCTTACAGCGTATAAAAGGCGA
ACTATTTATACAAGGAACATTAAGATGATGAAATATAGCGTACAGGCGGA
ATGTATCGTGTGCTTTTGGTCTATGTTTGGGTTATGCTTATTTGCATCTC
CTCTTTAGATACTTTCGTGAGGTGTTATTTGTTGTTGAAACGTCTTTTTG
ACCTATGTGTTGCGTTTGTATCCGACCCTCCTTCAGATGAGGGCAATGGG
AAGGGATGAGGTACTGAAAGCGGTGTTGAGGTGTGCAAACTACACCAATT
AAGATATTTTTGTCTTTGGTGTAGCGATGAACAAATGTGGATTTATTACT
GAATTCAGTTTGACTGATTGGTGCTCTTGAGGTTATCGCTCCGAACGGTG
CGTCTCGCGCCTTGGCGCACATACCCAAACTCAAACTATTATCAACATTT
TTCAGGTTAGGCGTACATTATTTGGAGGGCAAAGGTTATCACTGTGCTTT
GGTTTTTGTTTTATTATTGTGCTTATTTTGCGGAGGTGGGGGATTTTTTT
TTGTGTTGTTCTACATGTTTTTTGTCGCCAGCAGTAACAACAATTATTTT
AGGGGTCATTCCTAGCGGGCGCGTGTGCGTGTGTCTTGGCGGGAAAACAG
AATTTTGTCAACTGTTTCGATTTTAGGGCGTTTTAAAAAAAGAGCCCAAA
TTTGCTCAAAAATAATTATGCATCTTCAAAAAATAGTTTTGGGAATAACT
TGACCAAAACAGTGGTTGACAGTTCTGTTGGGTAAATATTTTTCCGCCAA
AAAATGCACCCGCTGAGGAATATTCCTCAGCACGTGCAGCGGTCCAGCAT
GGGCCCTACGTAGAACTACCTTTGTGAACCTTGTTGCGGAAGGGAGGAAT
TGTATACACTTCTATTTTCAATTTGTTGCTGGACGTCGTGTTTTTTCGTG
ACCATTTGGAAAGAAATATGACCAAGGTCTGATTAATTTAAGCAGGCAGC
GTTTGAAAACTACAAATTGGTTTGGTAAAAAGTCTGCATGTTTTCGGGTA
CTTGGCGTCAAAAAGGTGTGTGTCTTCCAAGATGTTCAACATTTTAGAAG
TGAGGTTCAACCCCCCAATAGAGTGCTTTCCTGTCTTGTTAAAGTCGTGA
CCAATGACCTTTATTTGGAGGACCCATTGCCCCTTGATCGAGTTGTAGCA
ATTTTGGGAGTGTTCGACCACTTTGGTGCACTCAGAGATTTGTGCGAGTG
TACTATTTTGTGGCTCAAAATGCCGATTCGCCCTACTCGAAATCGTGGCA
AAAACAGTGTTTTCACACAAGCCTGTGAGGGCACCGAAGTGGTGAAAGAG
AACCCCAAATATAGTTACAATGCAATCGAGGGGCATTGTGGGTTCTCCAA
TTAAGCGTAATTGGTCATGACCTTGGGTTAGGAGGGAAATCACTGTTTTA
ATTATGAACTTCCTTTTGGAAGGCACTCTCTTTGAAGAAGAAAGCGCTGG
TGGCAGCTGGATAGTTGTGATAGTTTTGGGTGCTTGTGTCTTGCGTTTCA
TGTCATGTATGTATGTTGCTTTGCTCGTCATGTATTCGTGTGTTAGCTGA
AATTGGAGGGTAGGTGTTGGCGCTGTCTGCTCCATAGGGCAAATCTCGTG
ATGAGGTTCGCTTCATGCATGGTGGTAGCGCGGTAACTCCTGTTTATTCG
ATATACAATTTGTATGTATATATATATATATATAAATTTTTTTGAACGAT
CAAAA back to topCoding sequence (CDS) from alignment at H-paniculata_contig2062:10066..15070- >mRNA_H-paniculata_contig2062.5355.1 ID=mRNA_H-paniculata_contig2062.5355.1|Name=mRNA_H-paniculata_contig2062.5355.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2994bp|location=Sequence derived from alignment at H-paniculata_contig2062:10066..15070- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTGCACTACAACACACCAGGAGGCGGTTGTTGGTGGTGATGGGAGCAG
CAGCAGTGGGTATTCGTACACGGTGCGGGTGAAAGCCCGGGGTAGCGTTG
CAGTCGTGAGCCTGAGATGTCCTGCAATCGCCGAGCTGCAGGCAAGCATC
GCTTCAGCGTTCGAGCTGGTACTGTTACCGACGCACAAGGGTATGTCCTT
AAGCTACTTGCATCCTGGCGGAGGAAAGGCCTTCCTCGACGACGACATGG
ACTTGCTTCTGGCTCTCACTCACTGGCGGAGCTGCCCTGCCCTCACCGTG
ACGGCTGTTTTTGCTGAAGACAACACAGACATGTGCACTACAACACACCA
GGAGGCGGTTGTTGGTGGTGATGGGAGCAGCAGCAGTGGGTATTCGTACA
CGGTGCGGGTGAAAGCCCGGGGTAGCGTTGCAGTCGTGAGCCTGAGATGT
CCTGCAATCGCCGAGCTGCAGGCAAGCATCGCTTCAGCGTTCGAGCTGGT
ACTGTTACCGACGCACAAGGGTATGTCCTTAAGCTACTTGCATCCTGGCG
GAGGAAAGGCCTTCCTCGACGACGACATGGACTTGCTTCTGGCTCTCACT
CACTGGCGGAGCTGCCCTGCCCTCACCGTGACGGCTGTTTTTGCTGAAGA
CAACACAGACTTACCAATCCCGGAGAGTATCTCAGGACTCTACCACGAGG
CTGCTGAGCACCTGCGTTCGTCTCACGGCGTCACGTCCATTACCCCGGTC
AGCCTCAGGCAGGCGGTGGCTCTTCTCAACCTGCCGCCGCGCCGCCTGGT
CACGCAGGGCCTAGCCCCTCACTGGTCGCTCAAGGCCCAGCAATCACCCC
CGCTGTCTCAACAGCAGACTGAGGCAGCGACGGCATTGCCCGAAGAGGAT
AACAACGCCGATCTCATGAGCGAGCACGAGTATGTTTCGGACACTGAAAG
CGAAGACGGCGACGACCTTGACGACAATACAGTAGTAGTGGAAGAGGTTG
AATATGACAGCACGCCCAGCGCCGTAACCCTCGCGGTTCCCGCGGCCGGA
GATTTGTCCATTGGATATGACCAGCAACAGGAAGAGGAATCTACGACAAA
AGCTTCAAACTTCGCAATCGATGCTGCCCCGTCGGCGGCGCAGTCGTCAC
CTTCGGAGACCCTTGACCGCGGCGATACACAAGTTGAGCAGGCCAGTTCG
CCATCGAGTGAAAGCGTTATCTCCGGAGATTTCACCCACGCCGCGGCCGC
CTCGAACTCCACCATCGCCACCTTCACTGAGACAAGTCCTCTCCATGCGG
CCCTTGTTGCCGGCGGTGTATCCATCCACCCGCACGAAACTGATGCGCTG
ATCCACGCGCTAGGAGTGGACCCCCCGCGGCTGGTTCATCTAGGTCTAGT
TAAGCAGGAAATCGCCCACGCCGTTCCTACCACAGCTACTGATATCTGTG
CTAGGCCCCGCCGCTCTGTCAGTCGTCCGGCTGGGGCGCGCAAACCCAAG
ACGATCCGAGTACCCGTCCGCCTCGCGGGTTCGAAGCGCCGCGGGGCCCG
CAGCAGCAGCAGCGCCAACACCAACGACATATTTGCCAACCTTATAAGAA
AGTCTGGAAAGCTTGTTGGAGAAGGTGTCGTCGTGCCGTGGCCGCAACTG
GCGGTGTCTACCACAGCCCCGTCTCAACGCCTTCGCGTGCAAACGATTCG
CGGGATGGGGAGCGCCTCCAGTCGGAAGGGCATGCAGGTTCGCGCCTTCA
GTCGCCACGGAGCTCGCGACAACGGTCCCGCTAGTCGCCGGCAAAGAATC
GTGAGTAACCCTAATGCTGGCGTCTGATTACCAATCCCGGAGAGTATCTC
AGGACTCTACCACGAGGCTGCTGAGCACCTGCGTTCGTCTCACGGCGTCA
CGTCCATTACCCCGGTCAGCCTCAGGCAGGCGGTGGCTCTTCTCAACCTG
CCGCCGCGCCGCCTGGTCACGCAGGGCCTAGCCCCTCACTGGTCGCTCAA
GGCCCAGCAATCACCCCCGCTGTCTCAACAGCAGACTGAGGCAGCGACGG
CATTGCCCGAAGAGGATAACAACGCCGATCTCATGAGCGAGCACGAGTAT
GTTTCGGACACTGAAAGCGAAGACGGCGACGACCTTGACGACAATACAGT
AGTAGTGGAAGAGGTTGAATATGACAGCACGCCCAGCGCCGTAACCCTCG
CGGTTCCCGCGGCCGGAGATTTGTCCATTGGATATGACCAGCAACAGGAA
GAGGAATCTACGACAAAAGCTTCAAACTTCGCAATCGATGCTGCCCCGTC
GGCGGCGCAGTCGTCACCTTCGGAGACCCTTGACCGCGGCGATACACAAG
TTGAGCAGGCCAGTTCGCCATCGAGTGAAAGCGTTATCTCCGGAGATTTC
ACCCACGCCGCGGCCGCCTCGAACTCCACCATCGCCACCTTCACTGAGAC
AAGTCCTCTCCATGCGGCCCTTGTTGCCGGCGGTGTATCCATCCACCCGC
ACGAAACTGATGCGCTGATCCACGCGCTAGGAGTGGACCCCCCGCGGCTG
GTTCATCTAGGTCTAGTTAAGCAGGAAATCGCCCACGCCGTTCCTACCAC
AGCTACTGATATCTGTGCTAGGCCCCGCCGCTCTGTCAGTCGTCCGGCTG
GGGCGCGCAAACCCAAGACGATCCGAGTACCCGTCCGCCTCGCGGGTTCG
AAGCGCCGCGGGGCCCGCAGCAGCAGCAGCGCCAACACCAACGACATATT
TGCCAACCTTATAAGAAAGTCTGGAAAGCTTGTTGGAGAAGGTGTCGTCG
TGCCGTGGCCGCAACTGGCGGTGTCTACCACAGCCCCGTCTCAACGCCTT
CGCGTGCAAACGATTCGCGGGATGGGGAGCGCCTCCAGTCGGAAGGGCAT
GCAGGTTCGCGCCTTCAGTCGCCACGGAGCTCGCGACAACGGTCCCGCTA
GTCGCCGGCAAAGAATCGTGAGTAACCCTAATGCTGGCGTCTGA back to top
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