prot_H-paniculata_contig2061.5350.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2061.5350.1
Unique Nameprot_H-paniculata_contig2061.5350.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length240
Homology
BLAST of mRNA_H-paniculata_contig2061.5350.1 vs. uniprot
Match: D7G0I5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0I5_ECTSI)

HSP 1 Score: 309 bits (791), Expect = 1.070e-103
Identity = 187/242 (77.27%), Postives = 205/242 (84.71%), Query Frame = 0
Query:    1 MADSWEDEEFDLPP-VPPTMVPVSWEDEEEEDLDRAAVAPGVAPKMSAEKAAXXXXXXXXXXXXXXXTRLQLGETAEQRRLRERNRVEEADNDLTEDLFAGSSGAGGKGAGD-ISDLKLKTVQDHVKLAIELSEKMESSKPAYVAAFLMEMVTKLSGKAMTTDGLTDVVNHTTMFRDEKREAEKRIETAKANVVNIQANQRANKKKIAKKKKAHADVFG-DFDADDIDTVGMDYESKYEDFM 239
            MADSWEDEEFDLP  VPPT VPVSWEDEEE+  D  AVAPG+APKMSA KAAXXXXXXXXX      TRLQLGETAEQRRLRERNRVEEADNDLTEDLF G  GA G+GAG  +S L LK +QDHVKLAIEL+E+M+SSKPA++ AFL E+VTKLS K MT DGLTD+VNHTTMFRDEKR+AE+RI +AKAN  N+ ANQRANKKK  KKKKAH+DVFG DFD D IDTVGMDYESKY+DFM
Sbjct:    1 MADSWEDEEFDLPSSVPPTAVPVSWEDEEEDQEDAGAVAPGLAPKMSAAKAAXXXXXXXXXIAAELETRLQLGETAEQRRLRERNRVEEADNDLTEDLFGGG-GARGQGAGGGLSGLALKNMQDHVKLAIELAERMDSSKPAHMTAFLKELVTKLSPK-MTADGLTDLVNHTTMFRDEKRQAEERIASAKANKTNVIANQRANKKKSIKKKKAHSDVFGGDFDGDGIDTVGMDYESKYDDFM 240          
BLAST of mRNA_H-paniculata_contig2061.5350.1 vs. uniprot
Match: A0A836CNA4_9STRA (Eukaryotic translation initiation factor 3 subunit J n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNA4_9STRA)

HSP 1 Score: 112 bits (279), Expect = 1.800e-26
Identity = 87/247 (35.22%), Postives = 121/247 (48.99%), Query Frame = 0
Query:    3 DSWEDEEFDLPPVPPTMVPVSWEDEEEEDLDRAAVAPGVAPKMSAEKAAXXXXXXXXXXXXXXXTRLQLGETAEQRRLRERNRVEEADNDLTEDLFAGSSGAGGKGA---GDISDLKLKTVQDHVKLAIELSEKME----SSKPAYVAAFLMEMVTKLSGKAMTTDGLTDVVNHTTMFRDEKREAEKRIETAKANVVNIQANQRANKKKIAKKKKAHADVFG---DFDADDIDTVGMDYESKYEDFM 239
            DSWED++F  P + P  V  SW+DEE       A  P    +   E+A                   Q  ETAE+RRLRER RVEE+D+ LTEDLF G   A    A     +  + LKT QDHVKLA++L EK+     S     + A L E++T++ GK ++ +    +  H   F+D K  AE++ +     ++  Q      +     KKK HAD+FG   D   D  D +  +YE  Y+DFM
Sbjct:    2 DSWEDDDFTPPTLVPPKVTQSWDDEEXXXXXXXA-KPTQPTEKQLEQARKAREAEAMRIAAAHEAAQQEAETAEERRLRERRRVEESDHALTEDLFGGGGTAEAAEAPAQAGVEGIPLKTTQDHVKLALDLGEKLSKDGSSGSSGNILALLKELITRVEGK-LSLEETNQLALHLNKFKDAKMVAEQKRQA----ILKKQKAXXXXRNAEKSKKKQHADLFGGAYDGVGDQYDELATNYEDAYDDFM 242          
BLAST of mRNA_H-paniculata_contig2061.5350.1 vs. uniprot
Match: A0A7S2C417_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2C417_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 3.440e-13
Identity = 73/225 (32.44%), Postives = 112/225 (49.78%), Query Frame = 0
Query:    1 MADSWEDEEFDLPPV----PPTMVPVSWEDEEEEDLDRAAVAPGVAPKMSAEKAAXXXXXXXXXXXXXXXTRLQLGETAEQRRLRERNRVEEADNDLTEDLFAGSSGAGG--KGAGDISDLKLKTVQDHVKLAIELSEKMES--SKPAYVAAFLMEMVTKLSGKAMTTDGLTDVVNHTTMFRDEKREAEKRIETAKANVVNIQANQRANKKKIAKKKKAHADVFG 217
            M D+W+D+EF++  +    PP   PVS  D+EEE         G APK+SAEK A               + LQ  ET ++RRLRER  +E AD++LT+DLF G + +    K    +    LK+++DH+ LA ++ E++E+  SK  Y+ A L E V K     +T   L +++    +    K   EK ++   A     +    A KK++ K+ K H    G
Sbjct:    1 MGDAWDDDEFEVSDLNGGFPP---PVSNWDDEEEFEPPPLPGHGEAPKLSAEKQAKLKNQKNAKKRNDLESALQEEETDDERRLRERLEIENADHELTDDLFGGGAKSETVVKIVQGVEGYSLKSLKDHLTLAHDVIERVENNKSKQNYIHAMLKEFVKKFDDH-LTPGDLGEIIG---ICNASKIAKEKLLKQPTAKKGQGKKKNTATKKEVKKEVKQHEVCHG 218          
BLAST of mRNA_H-paniculata_contig2061.5350.1 vs. uniprot
Match: M4BUM2_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BUM2_HYAAE)

HSP 1 Score: 69.3 bits (168), Expect = 1.670e-10
Identity = 59/196 (30.10%), Postives = 93/196 (47.45%), Query Frame = 0
Query:    3 DSWEDEEFDLPPVP-PTMVPVSWEDEEEEDLDRAAVAPGVA--------PKMSAEKAAXXXXXXXXXXXXXXXTRL--QLGETAEQRRLRERNRVEEADNDLTEDLFAGSSGAGGKGA-----GDISDLKLKTVQDHVKLAIELSEKMESSKPAYVAAFLMEMVTKLSGKAMTTDGLTDVVNHTTMFRDEKREAEK 182
            DSW+D+EF++PPV  P + P +W+DEE ED    AV P +         PK   +                   RL  Q  ET EQRR RE+  +EEAD ++  D FAG+      GA      ++S  +L ++ DH +    +S ++ +S   Y    +  ++TK S   +T D + ++     + ++EK  A K
Sbjct:    2 DSWDDDEFEVPPVTQPQISPATWDDEEAEDEPVPAVKPELPAATKALPKPKQLKKMKLKEIEEKQKMEIALAKARLAAQTDETGEQRRAREKASIEEADFEMAIDAFAGAPSKPAAGATNDVDDNVSAFRLLSLADHEQFGDVVSTRLAASNSKYALECIKVILTKASVN-LTADDMKEITTVVNVVKNEKIAAAK 196          
BLAST of mRNA_H-paniculata_contig2061.5350.1 vs. uniprot
Match: A0A1Z5JPF2_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JPF2_FISSO)

HSP 1 Score: 63.9 bits (154), Expect = 1.600e-8
Identity = 55/168 (32.74%), Postives = 89/168 (52.98%), Query Frame = 0
Query:   74 TAEQRRLRERNRVEEADNDLTEDLFAGSS----GAGGKGAGDISDLKLKTVQDHVKLAIELSEKMESSKPAYVA-AFLMEMVTKLSGKAMTTDGLTDVVNHTTMFRDEKREAEKRIETAKANVVNIQANQRANKKKIAKKKKAHADVFGDFDA-DDIDTVGMDYESKY 235
            T ++RR  ER R+E ADN+LT+DLF   +      G   AGD+  + LK ++DH+K A +++E M+     + A AF  E VT  S   +  D +T+++    + ++EK +A KR    +A     Q +++ +K   AK ++   + FGD D  D  D  G  YE  +
Sbjct:   95 TPDERRQLERQRIEAADNELTDDLFGADNTKNKATGAAAAGDV--VVLKDLKDHLKHARKVAEAMKKHGNVHFASAFFKECVTS-SKDVLDDDAVTELIKTLNVIKNEKVQAAKRKVKGQA-----QKSKKVDKVAEAKARQKMIETFGDNDKFDQYDEFGERYEDDF 254          
BLAST of mRNA_H-paniculata_contig2061.5350.1 vs. uniprot
Match: A0A6T7HVD2_9STRA (Hypothetical protein n=2 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A6T7HVD2_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 1.760e-8
Identity = 54/175 (30.86%), Postives = 95/175 (54.29%), Query Frame = 0
Query:   74 TAEQRRLRERNRVEEADNDLTEDLFAG----------SSGAGGKGAGDISDLKLKTVQDHVKLAIELSEKMESSKPAYVAAFLMEMVTKLSGKAMTTDGLTDVVNHTTMFRDEKREAEKRIETAKANVVNIQANQRANKKKIA--KKKKAHADVFGDFDA-DDIDTVGMDYESKY 235
            T E+RRL  + R+E+AD+ LT+DLF G           +G+   GAGD   + LK ++DH+K A ++ + +++    ++AA  ++ V + S  A+    +T++++   + ++EK  A K+        V  QA + A + K+A  K KK  A+++GD D  D  D +G  YE  +
Sbjct:   99 TIEERRLLAKQRIEDADHALTDDLFGGVDRSGPVGVVDAGSKAMGAGDT--VVLKDLKDHLKHARKVGQCLKAHGKIHLAAAFLKEVIQESSDALDDGAITEIISICNVIKNEKVAASKKK-------VKGQAQKSAKRDKVAETKAKKLSAELYGDNDNYDAYDEMGGAYEDDF 264          
BLAST of mRNA_H-paniculata_contig2061.5350.1 vs. uniprot
Match: A0A6V1PD14_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1PD14_HETAK)

HSP 1 Score: 60.8 bits (146), Expect = 2.010e-7
Identity = 69/214 (32.24%), Postives = 110/214 (51.40%), Query Frame = 0
Query:    3 DSWEDEEFDLPP----VPPTMVPVSWEDEEEEDLDRAAVAPGVAPKMSAEKAAXXXXXXXXXXXXXXXTR-----------LQLGETAEQRRLRERNRVEEADNDLTEDLFAGSSG-------------------AGGKGAGDISDLKLKTVQDHVKLAIELSEKMESSKPAYVAAFLMEMVTKLSGKAMTTDGLTDVVNHTTMFRDEKREAEK 182
            DSWED+EFD+P     V P   P +W+         A V    APK    K   XXXXXXXXXXXXXX             +Q  ET E+RR+RER  +EEAD++LTE+L +G+                     A  K    +  L + +++D +  A +L++++  +   +V AF  EM+ + S +++TTD +++++    + +++K +A K
Sbjct:    2 DSWEDDEFDVPAFNGSVAPPAAPTNWDXXXXXXXXXAPVDDEFAPKEPTVKQKAXXXXXXXXXXXXXXXXXIRKKLAVKLAIQANETDEERRIRERREIEEADHELTEELLSGAGAXXXXXXXXXXXXXXXXXXPATKKQEAGLGALAMDSLEDFMTTAAKLAQRLNGAPNHHVLAFFKEML-RGSTESLTTDDVSELIALANVIKNDKVKAAK 214          
BLAST of mRNA_H-paniculata_contig2061.5350.1 vs. uniprot
Match: A0A7S2JXZ9_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JXZ9_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 1.720e-6
Identity = 53/169 (31.36%), Postives = 87/169 (51.48%), Query Frame = 0
Query:   74 TAEQRRLRERNRVEEADNDLTEDLFAGSSGAGGKG-----AGDISDLKLKTVQDHVKLAIELSEKMESSKPAYVA-AFLMEMVTKLSGKAMTTDGLTDVVNHTTMFRDEKREAEKRIETAKANVVNIQANQRANKKKIAKKKKAHADVFGDFDA-DDIDTVGMDYESKY 235
            T E+RR  ER RVEEAD+ LT+DLF     A GKG     AGD   + +K ++DH+K A ++   ++    A++  AFL E+V +   + +  D +++++    + +++K      +  AK  V       + +K   AK KK   ++FG+ D  D  D  G  YE  +
Sbjct:   97 TPEERRKLERQRVEEADHALTDDLFGAVEAASGKGQVAVSAGD--KVVMKDLKDHLKHARQIGTCVKDHGKAHLTIAFLKEVVQQCK-EVIGDDEISELIKCCNVIKNDK------VLAAKKKVKGQAQKAKKDKAAEAKAKKIQQEMFGESDTYDQYDAYGDAYEDDF 256          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2061.5350.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D7G0I5_ECTSI1.070e-10377.27Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CNA4_9STRA1.800e-2635.22Eukaryotic translation initiation factor 3 subunit... [more]
A0A7S2C417_9STRA3.440e-1332.44Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
M4BUM2_HYAAE1.670e-1030.10Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
A0A1Z5JPF2_FISSO1.600e-832.74Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
A0A6T7HVD2_9STRA1.760e-830.86Hypothetical protein n=2 Tax=Attheya septentrional... [more]
A0A6V1PD14_HETAK2.010e-732.24Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2JXZ9_9STRA1.720e-631.36Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 170..197
NoneNo IPR availablePANTHERPTHR21681:SF0EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT Jcoord: 1..224
IPR013906Eukaryotic translation initiation factor 3 subunit JPFAMPF08597eIF3_subunitcoord: 2..239
e-value: 4.7E-24
score: 85.6
IPR013906Eukaryotic translation initiation factor 3 subunit JPANTHERPTHR21681EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT Jcoord: 1..224

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2061contigH-paniculata_contig2061:2755..9783 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2061.5350.1mRNA_H-paniculata_contig2061.5350.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2061 1413..10724 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2061.5350.1 ID=prot_H-paniculata_contig2061.5350.1|Name=mRNA_H-paniculata_contig2061.5350.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=240bp
MADSWEDEEFDLPPVPPTMVPVSWEDEEEEDLDRAAVAPGVAPKMSAEKA
AKAAAEKDARIAAELETRLQLGETAEQRRLRERNRVEEADNDLTEDLFAG
SSGAGGKGAGDISDLKLKTVQDHVKLAIELSEKMESSKPAYVAAFLMEMV
TKLSGKAMTTDGLTDVVNHTTMFRDEKREAEKRIETAKANVVNIQANQRA
NKKKIAKKKKAHADVFGDFDADDIDTVGMDYESKYEDFM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013906eIF3j