mRNA_H-paniculata_contig206.5344.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig206.5344.1
Unique NamemRNA_H-paniculata_contig206.5344.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig206.5344.1 vs. uniprot
Match: A0A6H5KG79_9PHAE (Histone H2A n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG79_9PHAE)

HSP 1 Score: 220 bits (560), Expect = 2.100e-67
Identity = 119/137 (86.86%), Postives = 127/137 (92.70%), Query Frame = 2 
Query:   71 MSGKGKGGRGDAKKSVTRSAKAGLQFPVGRIGRFLKQGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKSST---MKAKSSASQDY 472
            MSGKGKGGRG  KKS ++S+KAGLQFPV RIGR+LK+GKYA+RVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARI+PRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKSS     KA +SASQDY
Sbjct:    1 MSGKGKGGRG--KKSTSKSSKAGLQFPVARIGRYLKRGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKSSVGGKAKASASASQDY 135
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BLAST of mRNA_H-paniculata_contig206.5344.1 vs. uniprot
Match: D7FVQ5_ECTSI (Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVQ5_ECTSI)

HSP 1 Score: 221 bits (564), Expect = 2.760e-67
Identity = 120/136 (88.24%), Postives = 128/136 (94.12%), Query Frame = 2 
Query:   71 MSGKGKGGRGDAKKSVTRSAKAGLQFPVGRIGRFLKQGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKSSTMKAKSSAS--QDY 472
            MSGKGKGGRG  KKS ++S+KAGLQFPV RIGR+LK+GKYA+RVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARI+PRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKSS  KAK+SAS  QDY
Sbjct:   52 MSGKGKGGRG--KKSTSKSSKAGLQFPVARIGRYLKRGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKSSVGKAKASASASQDY 185
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BLAST of mRNA_H-paniculata_contig206.5344.1 vs. uniprot
Match: D7G193_ECTSI (Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G193_ECTSI)

HSP 1 Score: 221 bits (562), Expect = 4.090e-67
Identity = 116/125 (92.80%), Postives = 121/125 (96.80%), Query Frame = 2 
Query:   56 HSTSIMSGKGKGGRGDAKKSVTRSAKAGLQFPVGRIGRFLKQGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 430
            +ST+ MSGKGKGGRG  KKS TRSAKAGLQFPVGR+GRFLK+GKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARI+PRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK
Sbjct:   41 NSTTTMSGKGKGGRG--KKSTTRSAKAGLQFPVGRVGRFLKKGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 163
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BLAST of mRNA_H-paniculata_contig206.5344.1 vs. uniprot
Match: D7FWI9_ECTSI (Histone H2A n=6 Tax=Ectocarpus TaxID=2879 RepID=D7FWI9_ECTSI)

HSP 1 Score: 217 bits (553), Expect = 1.540e-66
Identity = 114/120 (95.00%), Postives = 117/120 (97.50%), Query Frame = 2 
Query:   71 MSGKGKGGRGDAKKSVTRSAKAGLQFPVGRIGRFLKQGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 430
            MSGKGKGGRG  KKS TRSAKAGLQFPVGR+GRFLK+GKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARI+PRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK
Sbjct:    1 MSGKGKGGRG--KKSTTRSAKAGLQFPVGRVGRFLKKGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 118
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BLAST of mRNA_H-paniculata_contig206.5344.1 vs. uniprot
Match: W7TMB5_9STRA (Histone H2A n=4 Tax=Monodopsidaceae TaxID=425072 RepID=W7TMB5_9STRA)

HSP 1 Score: 208 bits (530), Expect = 6.560e-63
Identity = 108/135 (80.00%), Postives = 119/135 (88.15%), Query Frame = 2 
Query:   71 MSGKGKGGRGDAKKS-VTRSAKAGLQFPVGRIGRFLKQGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKSSTMKAKSSASQDY 472
            M+GKGK GRG  KK  V+RS+KAGLQFPVGRI RFLK+G+YA+RVG+GAPVYLAAVLEYLTAE+LELAGNAARDNKK RI+PRH+QLAVRNDEELNKLLG VTIASGGVLPNIH+VLLPK       K SASQDY
Sbjct:    1 MAGKGKSGRGGGKKGGVSRSSKAGLQFPVGRISRFLKKGRYAARVGSGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHVQLAVRNDEELNKLLGGVTIASGGVLPNIHSVLLPKSKGKKSGKGSASQDY 135
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BLAST of mRNA_H-paniculata_contig206.5344.1 vs. uniprot
Match: D8LLP0_ECTSI (Histone H2A n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLP0_ECTSI)

HSP 1 Score: 207 bits (528), Expect = 7.750e-63
Identity = 108/120 (90.00%), Postives = 114/120 (95.00%), Query Frame = 2 
Query:   71 MSGKGKGGRGDAKKSVTRSAKAGLQFPVGRIGRFLKQGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 430
            MSGKGKGGRG  KK  +RSAKAGLQFPVGRIGRF+KQGKY+SRVG GAPVY+AAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELN+LLG+ TIASGGVLPNIHAVLLPKK
Sbjct:    1 MSGKGKGGRG--KKITSRSAKAGLQFPVGRIGRFIKQGKYSSRVGGGAPVYMAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNRLLGDATIASGGVLPNIHAVLLPKK 118
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BLAST of mRNA_H-paniculata_contig206.5344.1 vs. uniprot
Match: A0A061QUG5_9CHLO (Histone H2A n=4 Tax=core chlorophytes TaxID=2692248 RepID=A0A061QUG5_9CHLO)

HSP 1 Score: 207 bits (528), Expect = 1.260e-62
Identity = 107/134 (79.85%), Postives = 120/134 (89.55%), Query Frame = 2 
Query:   71 MSGKGKGGRGDAKKSVTRSAKAGLQFPVGRIGRFLKQGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKSSTMKAKSSASQDY 472
            MSG+GKG     KK+V+RSAKAGLQFPVGR+ R+LK+GKYA+R+GAGAPVYLAAVLEYLTAEVLELAGNAARDNKK RIVPRHIQLAVRNDEEL+KLLG+VTIASGGVLPNIH+VLLPKKS    A  S SQ++
Sbjct:    1 MSGRGKGKSAAGKKAVSRSAKAGLQFPVGRVARYLKKGKYATRIGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIASGGVLPNIHSVLLPKKSDKKGASGSVSQEF 134
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BLAST of mRNA_H-paniculata_contig206.5344.1 vs. uniprot
Match: A0A7S3K2Q9_9STRA (Histone H2A n=4 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K2Q9_9STRA)

HSP 1 Score: 207 bits (528), Expect = 1.440e-62
Identity = 110/138 (79.71%), Postives = 120/138 (86.96%), Query Frame = 2 
Query:   71 MSGKGKGGRGDAKKSV----TRSAKAGLQFPVGRIGRFLKQGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKSSTMKAKSSASQDY 472
            MSGKGKGGR           T+SAKAGLQFPVGRIGRFLKQGKYA+RVGAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RI+PRH+QLAVRNDEELNKLLG VTIASGGVLPNIHAVLLPKKS +   K+S SQ++
Sbjct:    1 MSGKGKGGRXXXXXXXXXXXTKSAKAGLQFPVGRIGRFLKQGKYATRVGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIIPRHLQLAVRNDEELNKLLGSVTIASGGVLPNIHAVLLPKKSKSKTTKASGSQEF 138
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BLAST of mRNA_H-paniculata_contig206.5344.1 vs. uniprot
Match: A0A835ZLE9_9STRA (Histone H2A n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZLE9_9STRA)

HSP 1 Score: 206 bits (525), Expect = 4.320e-62
Identity = 111/137 (81.02%), Postives = 126/137 (91.97%), Query Frame = 2 
Query:   77 GKGKGGRGDAKKSVTRSAKAGLQFPVGRIGRFLKQGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKS-STMKAK----SSASQDY 472
            GKGKGGRGD KK+V++SAKAGLQFPVGR+GRFLKQG+YA RVGAGAPVY+AAV+EYL AEVLEL+GNAARDNKK+RI+PRHIQLAVRNDEELNKLLG+VTIA+GGVLPNIHAVLLPKK+ S  KA     +SASQ+Y
Sbjct:    5 GKGKGGRGD-KKAVSKSAKAGLQFPVGRVGRFLKQGRYAKRVGAGAPVYMAAVMEYLCAEVLELSGNAARDNKKSRIIPRHIQLAVRNDEELNKLLGKVTIAAGGVLPNIHAVLLPKKTRSKSKAAEASTASASQEY 140
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BLAST of mRNA_H-paniculata_contig206.5344.1 vs. uniprot
Match: A0A448YXB3_9STRA (Histone H2A n=5 Tax=Bacillariophyta TaxID=2836 RepID=A0A448YXB3_9STRA)

HSP 1 Score: 206 bits (524), Expect = 4.540e-62
Identity = 108/134 (80.60%), Postives = 120/134 (89.55%), Query Frame = 2 
Query:   71 MSGKGKGGRGDAKKSVTRSAKAGLQFPVGRIGRFLKQGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKSSTMKAKSSASQDY 472
            MSGKGKGGRG  K SV+ S KAGLQFPVGRIGR+L+QGKYA+R+GAGAPVYLA+VLEYL AE+LELAGNAARDNKK+RI+PRHI LAV+NDEELNKLLG VTIASGGVLPNIHAVLLPKK+   K  S ASQD+
Sbjct:    1 MSGKGKGGRGAKKGSVSSSQKAGLQFPVGRIGRYLRQGKYATRMGAGAPVYLASVLEYLCAEILELAGNAARDNKKSRIIPRHITLAVKNDEELNKLLGNVTIASGGVLPNIHAVLLPKKT---KMNSKASQDF 131
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig206.5344.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KG79_9PHAE2.100e-6786.86Histone H2A n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
D7FVQ5_ECTSI2.760e-6788.24Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
D7G193_ECTSI4.090e-6792.80Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
D7FWI9_ECTSI1.540e-6695.00Histone H2A n=6 Tax=Ectocarpus TaxID=2879 RepID=D7... [more]
W7TMB5_9STRA6.560e-6380.00Histone H2A n=4 Tax=Monodopsidaceae TaxID=425072 R... [more]
D8LLP0_ECTSI7.750e-6390.00Histone H2A n=2 Tax=Ectocarpus TaxID=2879 RepID=D8... [more]
A0A061QUG5_9CHLO1.260e-6279.85Histone H2A n=4 Tax=core chlorophytes TaxID=269224... [more]
A0A7S3K2Q9_9STRA1.440e-6279.71Histone H2A n=4 Tax=Aureoumbra lagunensis TaxID=44... [more]
A0A835ZLE9_9STRA4.320e-6281.02Histone H2A n=2 Tax=Tribonema minus TaxID=303371 R... [more]
A0A448YXB3_9STRA4.540e-6280.60Histone H2A n=5 Tax=Bacillariophyta TaxID=2836 Rep... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig206contigH-paniculata_contig206:42454..43766 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score224.2
Seed ortholog evalue3.7e-56
Seed eggNOG ortholog2880.D7FVQ5
Preferred nameH2AFY
KEGG koko:K11251,ko:K16617
KEGG Pathwayko04217,ko04974,ko05034,ko05322,map04217,map04974,map05034,map05322
Hectar predicted targeting categoryother localisation
GOsGO:0000122,GO:0000182,GO:0000228,GO:0000775,GO:0000785,GO:0000786,GO:0000790,GO:0000792,GO:0000793,GO:0000803,GO:0000805,GO:0000976,GO:0000977,GO:0000979,GO:0001012,GO:0001046,GO:0001047,GO:0001067,GO:0001739,GO:0001740,GO:0001932,GO:0001933,GO:0003674,GO:0003676,GO:0003677,GO:0003682,GO:0003690,GO:0004857,GO:0004860,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005720,GO:0005721,GO:0005730,GO:0005813,GO:0005815,GO:0005856,GO:0006323,GO:0006325,GO:0006333,GO:0006334,GO:0006342,GO:0006355,GO:0006356,GO:0006357,GO:0006469,GO:0006996,GO:0007063,GO:0007088,GO:0007275,GO:0007346,GO:0007399,GO:0007417,GO:0007420,GO:0007549,GO:0008104,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0009893,GO:0009987,GO:0010385,GO:0010468,GO:0010556,GO:0010558,GO:0010563,GO:0010564,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010638,GO:0010639,GO:0010948,GO:0015630,GO:0016043,GO:0016458,GO:0016479,GO:0019207,GO:0019210,GO:0019216,GO:0019219,GO:0019220,GO:0019222,GO:0019887,GO:0019899,GO:0019900,GO:0019901,GO:0022607,GO:0030234,GO:0030291,GO:0030856,GO:0030858,GO:0031056,GO:0031057,GO:0031060,GO:0031061,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031399,GO:0031400,GO:0031490,GO:0031491,GO:0031492,GO:0031497,GO:0031974,GO:0031981,GO:0032268,GO:0032269,GO:0032501,GO:0032502,GO:0032879,GO:0032880,GO:0032991,GO:0032993,GO:0033036,GO:0033043,GO:0033044,GO:0033045,GO:0033047,GO:0033127,GO:0033128,GO:0033365,GO:0033673,GO:0034091,GO:0034093,GO:0034182,GO:0034184,GO:0034502,GO:0034613,GO:0034622,GO:0034728,GO:0040029,GO:0042325,GO:0042326,GO:0043086,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043549,GO:0043565,GO:0043933,GO:0044085,GO:0044092,GO:0044212,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044430,GO:0044446,GO:0044454,GO:0044464,GO:0044815,GO:0044877,GO:0045184,GO:0045595,GO:0045597,GO:0045604,GO:0045606,GO:0045616,GO:0045618,GO:0045682,GO:0045684,GO:0045786,GO:0045787,GO:0045814,GO:0045815,GO:0045840,GO:0045859,GO:0045876,GO:0045892,GO:0045931,GO:0045934,GO:0045936,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048585,GO:0048731,GO:0048856,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0051094,GO:0051128,GO:0051129,GO:0051130,GO:0051171,GO:0051172,GO:0051174,GO:0051179,GO:0051234,GO:0051239,GO:0051240,GO:0051246,GO:0051248,GO:0051252,GO:0051253,GO:0051276,GO:0051338,GO:0051348,GO:0051569,GO:0051572,GO:0051641,GO:0051726,GO:0051783,GO:0051785,GO:0051983,GO:0051984,GO:0060255,GO:0060322,GO:0060341,GO:0061085,GO:0061086,GO:0062033,GO:0065003,GO:0065004,GO:0065007,GO:0065009,GO:0070013,GO:0070199,GO:0070727,GO:0071103,GO:0071168,GO:0071169,GO:0071824,GO:0071840,GO:0071900,GO:0071901,GO:0072594,GO:0080090,GO:0080134,GO:0090068,GO:0097159,GO:0098687,GO:0098772,GO:1901363,GO:1901836,GO:1901837,GO:1901987,GO:1901988,GO:1902275,GO:1902679,GO:1902749,GO:1902750,GO:1902882,GO:1902883,GO:1902884,GO:1903506,GO:1903507,GO:1903827,GO:1903828,GO:1904814,GO:1904815,GO:1905268,GO:1990837,GO:1990841,GO:2000026,GO:2000112,GO:2000113,GO:2001141,GO:2001251,GO:2001252
EggNOG free text desc.Histone H2A
EggNOG OGsCOG5262@1,KOG1756@2759
Ec32 ortholog descriptionHistone H2A.X
Ec32 orthologEc-03_003330.1
COG Functional cat.B
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00536,ko03036,ko04147
Exons1
Model size1313
Cds size405
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig206.5344.1prot_H-paniculata_contig206.5344.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig206 42524..42928 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929537.2289836-UTR-H-paniculata_contig206:42453..425231622929537.2289836-UTR-H-paniculata_contig206:42453..42523Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig206 42454..42523 +
1691480903.6299417-UTR-H-paniculata_contig206:42453..425231691480903.6299417-UTR-H-paniculata_contig206:42453..42523Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig206 42454..42523 +
1622929537.2557313-UTR-H-paniculata_contig206:42928..437661622929537.2557313-UTR-H-paniculata_contig206:42928..43766Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig206 42929..43766 +
1691480903.653317-UTR-H-paniculata_contig206:42928..437661691480903.653317-UTR-H-paniculata_contig206:42928..43766Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig206 42929..43766 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929537.2449143-CDS-H-paniculata_contig206:42523..429281622929537.2449143-CDS-H-paniculata_contig206:42523..42928Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig206 42524..42928 +
1691480903.643316-CDS-H-paniculata_contig206:42523..429281691480903.643316-CDS-H-paniculata_contig206:42523..42928Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig206 42524..42928 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig206.5344.1

>prot_H-paniculata_contig206.5344.1 ID=prot_H-paniculata_contig206.5344.1|Name=mRNA_H-paniculata_contig206.5344.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=135bp
MSGKGKGGRGDAKKSVTRSAKAGLQFPVGRIGRFLKQGKYASRVGAGAPV
YLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGE
VTIASGGVLPNIHAVLLPKKSSTMKAKSSASQDY*
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mRNA from alignment at H-paniculata_contig206:42454..43766+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig206.5344.1 ID=mRNA_H-paniculata_contig206.5344.1|Name=mRNA_H-paniculata_contig206.5344.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1313bp|location=Sequence derived from alignment at H-paniculata_contig206:42454..43766+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CTCATCCTTCTCCTCTACACTACAGTAAACGCACATCTTTTGTATCCTTC
AACACCACTCAACTAGTATCATGTCTGGCAAGGGCAAGGGTGGACGCGGT
GACGCGAAGAAGTCCGTCACTAGATCTGCGAAGGCCGGCCTGCAGTTCCC
AGTTGGTCGTATCGGTCGATTCCTCAAGCAGGGCAAGTATGCGTCTCGAG
TAGGTGCTGGTGCCCCGGTCTACCTGGCTGCTGTCCTCGAGTACCTCACA
GCTGAAGTGCTAGAGCTGGCGGGAAACGCAGCCCGTGACAACAAGAAGGC
CCGCATCGTGCCCAGGCACATTCAGCTGGCCGTGCGTAACGACGAGGAGC
TGAACAAGCTCCTGGGTGAGGTTACCATCGCTTCAGGTGGTGTCCTGCCC
AACATCCACGCTGTTCTTCTGCCCAAGAAGTCTAGCACGATGAAGGCCAA
GTCTTCGGCTTCCCAGGACTACTGAGGGAGTGGTGGAGCTGCTCAACTCA
AAAAAAAAAACTGTGATGTAGGGAGGCGGCCACGCTGATGTACTTCACTT
CCGTCAACAAAAAAAACCTGGTGTTTACTCAACACCACCCTTCTCCCGGA
AGAAAAAAGCTGCTATTTCTCCCCGACTGGATTGGTCTTTTTGTTCACCT
TTCCCTTGTTTTGATATTGCAACGGAGTTTAGTGACGCAGTGTGCGGTCG
TGTGGCGTTGTGGAGGGCGGCTTTGTTAATCTCGAGCTATGTTGGATGGT
GAGTTCCATGGTGTAAGGGATTTGTTATTTTGAGCCTTATTTGTGATGAA
GCATACATTTGGTCCGAAGGGCTTGTGTTGTACACTTAGTACCTCAGGTG
AGGTGGGAGTCAGTGCGTTGCATGAATTCCGAGTTACTTCGCGTTGTCGA
CAGTTGCCCCGATGTCTAGGCGTTTGTGCGCAACTCCCCGACATTCTTCT
CAACTTGCGACTTAAACAGCAGGAGTTATTGTTGTGAACCTGTCCGATAG
GTGTGGGTTGTCAGGTATTATAATCGTTGAAAGCGGACAGATAGAGCTGT
GGGTTTAGTAGAAAAGAACCTACTGTTTCGTGTGAGAAATAGAGCAAATA
GAAGACTACCAGGTGAACTTTCTGCCTCAGCTTATACTCCGTGATGGAGT
CATGAAAATTAACTTGCCGGTGCACGGTATTTGTGTCCTGAAAAATGATG
CTGTGCTACTGCAAGTTGCTGCAGCTGGTGTTTCGGCCGACCATGCACTC
GGCTGCTCATAGATAAAAACTTAATATTACACATCAGTGGTCTCTGGATG
GTCCACAATTGTA
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Coding sequence (CDS) from alignment at H-paniculata_contig206:42454..43766+

>mRNA_H-paniculata_contig206.5344.1 ID=mRNA_H-paniculata_contig206.5344.1|Name=mRNA_H-paniculata_contig206.5344.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=810bp|location=Sequence derived from alignment at H-paniculata_contig206:42454..43766+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTCTGGCAAGGGCAAGGGTGGACGCGGTGACGCGAAGAAGTCCGTCAC
TAGATCTGCGAAGGCCGGCCTGCAGTTCCCAGTTGGTCGTATCGGTCGAT
TCCTCAAGCAGGGCAAGTATGCGTCTCGAGTAGGTGCTGGTGCCCCGGTC
TACCTGGCTGCTGTCCTCGAGTACCTCACAGCTGAAGTGCTAGAGCTGGC
GGGAAACGCAGCCCGTGACAACAAGAAGGCCCGCATCGTGCCCAGGCACA
TTCAGCTGGCCGTGCGTAACGACGAGGAGCTGAACAAGCTCCTGGGTGAG
GTTACCATCGCTTCAGGTGGTGTCCTGCCCAACATCCACGCTGTTCTTCT
GCCCAAGAAGTCTAGCACGATGAAGGCCAAGTCTTCGGCTTCCCAGGACT
ACTGAATGTCTGGCAAGGGCAAGGGTGGACGCGGTGACGCGAAGAAGTCC
GTCACTAGATCTGCGAAGGCCGGCCTGCAGTTCCCAGTTGGTCGTATCGG
TCGATTCCTCAAGCAGGGCAAGTATGCGTCTCGAGTAGGTGCTGGTGCCC
CGGTCTACCTGGCTGCTGTCCTCGAGTACCTCACAGCTGAAGTGCTAGAG
CTGGCGGGAAACGCAGCCCGTGACAACAAGAAGGCCCGCATCGTGCCCAG
GCACATTCAGCTGGCCGTGCGTAACGACGAGGAGCTGAACAAGCTCCTGG
GTGAGGTTACCATCGCTTCAGGTGGTGTCCTGCCCAACATCCACGCTGTT
CTTCTGCCCAAGAAGTCTAGCACGATGAAGGCCAAGTCTTCGGCTTCCCA
GGACTACTGA
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