prot_H-paniculata_contig206.5344.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig206.5344.1
Unique Nameprot_H-paniculata_contig206.5344.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length135
Homology
BLAST of mRNA_H-paniculata_contig206.5344.1 vs. uniprot
Match: A0A6H5KG79_9PHAE (Histone H2A n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG79_9PHAE)

HSP 1 Score: 219 bits (557), Expect = 2.080e-71
Identity = 119/137 (86.86%), Postives = 127/137 (92.70%), Query Frame = 0
Query:    1 MSGKGKGGRGDAKKSVTRSAKAGLQFPVGRIGRFLKQGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKSST---MKAKSSASQDY 134
            MSGKGKGGRG  KKS ++S+KAGLQFPV RIGR+LK+GKYA+RVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARI+PRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKSS     KA +SASQDY
Sbjct:    1 MSGKGKGGRG--KKSTSKSSKAGLQFPVARIGRYLKRGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKSSVGGKAKASASASQDY 135          
BLAST of mRNA_H-paniculata_contig206.5344.1 vs. uniprot
Match: D7FVQ5_ECTSI (Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVQ5_ECTSI)

HSP 1 Score: 220 bits (561), Expect = 2.670e-71
Identity = 120/136 (88.24%), Postives = 128/136 (94.12%), Query Frame = 0
Query:    1 MSGKGKGGRGDAKKSVTRSAKAGLQFPVGRIGRFLKQGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKSSTMKAKSSAS--QDY 134
            MSGKGKGGRG  KKS ++S+KAGLQFPV RIGR+LK+GKYA+RVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARI+PRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKSS  KAK+SAS  QDY
Sbjct:   52 MSGKGKGGRG--KKSTSKSSKAGLQFPVARIGRYLKRGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKSSVGKAKASASASQDY 185          
BLAST of mRNA_H-paniculata_contig206.5344.1 vs. uniprot
Match: D7FWI9_ECTSI (Histone H2A n=6 Tax=Ectocarpus TaxID=2879 RepID=D7FWI9_ECTSI)

HSP 1 Score: 215 bits (547), Expect = 4.540e-70
Identity = 114/121 (94.21%), Postives = 118/121 (97.52%), Query Frame = 0
Query:    1 MSGKGKGGRGDAKKSVTRSAKAGLQFPVGRIGRFLKQGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKS 121
            MSGKGKGGRG  KKS TRSAKAGLQFPVGR+GRFLK+GKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARI+PRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK+
Sbjct:    1 MSGKGKGGRG--KKSTTRSAKAGLQFPVGRVGRFLKKGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKT 119          
BLAST of mRNA_H-paniculata_contig206.5344.1 vs. uniprot
Match: D7G193_ECTSI (Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G193_ECTSI)

HSP 1 Score: 215 bits (547), Expect = 2.680e-69
Identity = 114/121 (94.21%), Postives = 118/121 (97.52%), Query Frame = 0
Query:    1 MSGKGKGGRGDAKKSVTRSAKAGLQFPVGRIGRFLKQGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKS 121
            MSGKGKGGRG  KKS TRSAKAGLQFPVGR+GRFLK+GKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARI+PRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK+
Sbjct:   46 MSGKGKGGRG--KKSTTRSAKAGLQFPVGRVGRFLKKGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKT 164          
BLAST of mRNA_H-paniculata_contig206.5344.1 vs. uniprot
Match: W7TMB5_9STRA (Histone H2A n=4 Tax=Monodopsidaceae TaxID=425072 RepID=W7TMB5_9STRA)

HSP 1 Score: 207 bits (527), Expect = 7.770e-67
Identity = 108/135 (80.00%), Postives = 119/135 (88.15%), Query Frame = 0
Query:    1 MSGKGKGGRGDAKKS-VTRSAKAGLQFPVGRIGRFLKQGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKSSTMKAKSSASQDY 134
            M+GKGK GRG  KK  V+RS+KAGLQFPVGRI RFLK+G+YA+RVG+GAPVYLAAVLEYLTAE+LELAGNAARDNKK RI+PRH+QLAVRNDEELNKLLG VTIASGGVLPNIH+VLLPK       K SASQDY
Sbjct:    1 MAGKGKSGRGGGKKGGVSRSSKAGLQFPVGRISRFLKKGRYAARVGSGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHVQLAVRNDEELNKLLGGVTIASGGVLPNIHSVLLPKSKGKKSGKGSASQDY 135          
BLAST of mRNA_H-paniculata_contig206.5344.1 vs. uniprot
Match: A0A061QUG5_9CHLO (Histone H2A n=4 Tax=core chlorophytes TaxID=2692248 RepID=A0A061QUG5_9CHLO)

HSP 1 Score: 206 bits (525), Expect = 1.520e-66
Identity = 107/134 (79.85%), Postives = 120/134 (89.55%), Query Frame = 0
Query:    1 MSGKGKGGRGDAKKSVTRSAKAGLQFPVGRIGRFLKQGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKSSTMKAKSSASQDY 134
            MSG+GKG     KK+V+RSAKAGLQFPVGR+ R+LK+GKYA+R+GAGAPVYLAAVLEYLTAEVLELAGNAARDNKK RIVPRHIQLAVRNDEEL+KLLG+VTIASGGVLPNIH+VLLPKKS    A  S SQ++
Sbjct:    1 MSGRGKGKSAAGKKAVSRSAKAGLQFPVGRVARYLKKGKYATRIGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIASGGVLPNIHSVLLPKKSDKKGASGSVSQEF 134          
BLAST of mRNA_H-paniculata_contig206.5344.1 vs. uniprot
Match: A0A7S3K2Q9_9STRA (Histone H2A n=4 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K2Q9_9STRA)

HSP 1 Score: 206 bits (525), Expect = 1.730e-66
Identity = 110/138 (79.71%), Postives = 120/138 (86.96%), Query Frame = 0
Query:    1 MSGKGKGGRGDAKKSV----TRSAKAGLQFPVGRIGRFLKQGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKSSTMKAKSSASQDY 134
            MSGKGKGGR           T+SAKAGLQFPVGRIGRFLKQGKYA+RVGAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RI+PRH+QLAVRNDEELNKLLG VTIASGGVLPNIHAVLLPKKS +   K+S SQ++
Sbjct:    1 MSGKGKGGRXXXXXXXXXXXTKSAKAGLQFPVGRIGRFLKQGKYATRVGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIIPRHLQLAVRNDEELNKLLGSVTIASGGVLPNIHAVLLPKKSKSKTTKASGSQEF 138          
BLAST of mRNA_H-paniculata_contig206.5344.1 vs. uniprot
Match: D8LLP0_ECTSI (Histone H2A n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLP0_ECTSI)

HSP 1 Score: 205 bits (521), Expect = 3.790e-66
Identity = 108/120 (90.00%), Postives = 114/120 (95.00%), Query Frame = 0
Query:    1 MSGKGKGGRGDAKKSVTRSAKAGLQFPVGRIGRFLKQGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 120
            MSGKGKGGRG  KK  +RSAKAGLQFPVGRIGRF+KQGKY+SRVG GAPVY+AAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELN+LLG+ TIASGGVLPNIHAVLLPKK
Sbjct:    1 MSGKGKGGRG--KKITSRSAKAGLQFPVGRIGRFIKQGKYSSRVGGGAPVYMAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNRLLGDATIASGGVLPNIHAVLLPKK 118          
BLAST of mRNA_H-paniculata_contig206.5344.1 vs. uniprot
Match: A0A835ZLE9_9STRA (Histone H2A n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZLE9_9STRA)

HSP 1 Score: 205 bits (522), Expect = 5.290e-66
Identity = 111/137 (81.02%), Postives = 126/137 (91.97%), Query Frame = 0
Query:    3 GKGKGGRGDAKKSVTRSAKAGLQFPVGRIGRFLKQGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKS-STMKAK----SSASQDY 134
            GKGKGGRGD KK+V++SAKAGLQFPVGR+GRFLKQG+YA RVGAGAPVY+AAV+EYL AEVLEL+GNAARDNKK+RI+PRHIQLAVRNDEELNKLLG+VTIA+GGVLPNIHAVLLPKK+ S  KA     +SASQ+Y
Sbjct:    5 GKGKGGRGD-KKAVSKSAKAGLQFPVGRVGRFLKQGRYAKRVGAGAPVYMAAVMEYLCAEVLELSGNAARDNKKSRIIPRHIQLAVRNDEELNKLLGKVTIAAGGVLPNIHAVLLPKKTRSKSKAAEASTASASQEY 140          
BLAST of mRNA_H-paniculata_contig206.5344.1 vs. uniprot
Match: A0A448YXB3_9STRA (Histone H2A n=5 Tax=Bacillariophyta TaxID=2836 RepID=A0A448YXB3_9STRA)

HSP 1 Score: 205 bits (521), Expect = 5.600e-66
Identity = 108/134 (80.60%), Postives = 120/134 (89.55%), Query Frame = 0
Query:    1 MSGKGKGGRGDAKKSVTRSAKAGLQFPVGRIGRFLKQGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKSSTMKAKSSASQDY 134
            MSGKGKGGRG  K SV+ S KAGLQFPVGRIGR+L+QGKYA+R+GAGAPVYLA+VLEYL AE+LELAGNAARDNKK+RI+PRHI LAV+NDEELNKLLG VTIASGGVLPNIHAVLLPKK+   K  S ASQD+
Sbjct:    1 MSGKGKGGRGAKKGSVSSSQKAGLQFPVGRIGRYLRQGKYATRMGAGAPVYLASVLEYLCAEILELAGNAARDNKKSRIIPRHITLAVKNDEELNKLLGNVTIASGGVLPNIHAVLLPKKT---KMNSKASQDF 131          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig206.5344.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KG79_9PHAE2.080e-7186.86Histone H2A n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
D7FVQ5_ECTSI2.670e-7188.24Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
D7FWI9_ECTSI4.540e-7094.21Histone H2A n=6 Tax=Ectocarpus TaxID=2879 RepID=D7... [more]
D7G193_ECTSI2.680e-6994.21Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
W7TMB5_9STRA7.770e-6780.00Histone H2A n=4 Tax=Monodopsidaceae TaxID=425072 R... [more]
A0A061QUG5_9CHLO1.520e-6679.85Histone H2A n=4 Tax=core chlorophytes TaxID=269224... [more]
A0A7S3K2Q9_9STRA1.730e-6679.71Histone H2A n=4 Tax=Aureoumbra lagunensis TaxID=44... [more]
D8LLP0_ECTSI3.790e-6690.00Histone H2A n=2 Tax=Ectocarpus TaxID=2879 RepID=D8... [more]
A0A835ZLE9_9STRA5.290e-6681.02Histone H2A n=2 Tax=Tribonema minus TaxID=303371 R... [more]
A0A448YXB3_9STRA5.600e-6680.60Histone H2A n=5 Tax=Bacillariophyta TaxID=2836 Rep... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002119Histone H2APRINTSPR00620HISTONEH2Acoord: 43..58
score: 90.36
coord: 58..71
score: 90.54
coord: 14..36
score: 69.65
coord: 72..86
score: 74.98
coord: 100..118
score: 76.04
IPR002119Histone H2ASMARTSM00414h2a4coord: 3..123
e-value: 3.4E-80
score: 282.4
IPR032454Histone H2A, C-terminal domainPFAMPF16211Histone_H2A_Ccoord: 92..123
e-value: 1.8E-19
score: 69.2
IPR007125Histone H2A/H2B/H3PFAMPF00125Histonecoord: 11..89
e-value: 1.2E-15
score: 58.0
IPR009072Histone-foldGENE3D1.10.20.10coord: 1..129
e-value: 1.7E-63
score: 214.3
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 5..120
NoneNo IPR availablePANTHERPTHR23430HISTONE H2Acoord: 7..132
NoneNo IPR availablePANTHERPTHR23430:SF238coord: 7..132
IPR032458Histone H2A conserved sitePROSITEPS00046HISTONE_H2Acoord: 22..28

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig206contigH-paniculata_contig206:42524..42928 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig206.5344.1mRNA_H-paniculata_contig206.5344.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig206 42454..43766 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig206.5344.1 ID=prot_H-paniculata_contig206.5344.1|Name=mRNA_H-paniculata_contig206.5344.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=135bp
MSGKGKGGRGDAKKSVTRSAKAGLQFPVGRIGRFLKQGKYASRVGAGAPV
YLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGE
VTIASGGVLPNIHAVLLPKKSSTMKAKSSASQDY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002119Histone_H2A
IPR032454Histone_H2A_C
IPR007125Histone_H2A/H2B/H3
IPR009072Histone-fold
IPR032458Histone_H2A_CS