mRNA_H-paniculata_contig20578.5336.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig20578.5336.1
Unique NamemRNA_H-paniculata_contig20578.5336.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig20578.5336.1 vs. uniprot
Match: D8LQQ0_ECTSI (GPI ethanolamine phosphate transferase 3 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQQ0_ECTSI)

HSP 1 Score: 111 bits (277), Expect = 4.540e-27
Identity = 52/59 (88.14%), Postives = 56/59 (94.92%), Query Frame = 1 
Query:    4 RDLHTVDDGVLAHLSEELEKKDWDVLVAHFLGVDHVGHTFGPASQAMEDKLEQMDIALR 180
            RDLHTVDDGVL+HLS EL K+DWDVLVAHFLGVDHVGHTFGPASQAMEDKL+QM+ ALR
Sbjct:  238 RDLHTVDDGVLSHLSTELGKRDWDVLVAHFLGVDHVGHTFGPASQAMEDKLDQMNAALR 296
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BLAST of mRNA_H-paniculata_contig20578.5336.1 vs. uniprot
Match: A0A836CFR5_9STRA (GPI ethanolamine phosphate transferase 3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFR5_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 7.320e-22
Identity = 46/59 (77.97%), Postives = 49/59 (83.05%), Query Frame = 1 
Query:    4 RDLHTVDDGVLAHLSEELEKKDWDVLVAHFLGVDHVGHTFGPASQAMEDKLEQMDIALR 180
            RDLHTVDDGVLA L  EL  +DW VLVAHFLGVDHVGHT GPA++AM DKL QMD ALR
Sbjct:  182 RDLHTVDDGVLARLPAELAARDWRVLVAHFLGVDHVGHTHGPATRAMADKLAQMDAALR 240
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BLAST of mRNA_H-paniculata_contig20578.5336.1 vs. uniprot
Match: A0A1W0A6G4_9STRA (GPI ethanolamine phosphate transferase 3 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A6G4_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 1.020e-20
Identity = 42/60 (70.00%), Postives = 51/60 (85.00%), Query Frame = 1 
Query:    1 VRDLHTVDDGVLAHLSEELEKKDWDVLVAHFLGVDHVGHTFGPASQAMEDKLEQMDIALR 180
            V+DLHTVD+GVLAH+  ELE+ DWDVL+AHFLGVDHVGHT+GP S  ME KL+QM+  L+
Sbjct:  196 VKDLHTVDNGVLAHIYPELEQSDWDVLIAHFLGVDHVGHTYGPNSPFMESKLDQMNDFLK 255
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BLAST of mRNA_H-paniculata_contig20578.5336.1 vs. uniprot
Match: A0A067CQW9_SAPPC (GPI ethanolamine phosphate transferase 3 n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CQW9_SAPPC)

HSP 1 Score: 92.0 bits (227), Expect = 2.600e-20
Identity = 42/59 (71.19%), Postives = 49/59 (83.05%), Query Frame = 1 
Query:    1 VRDLHTVDDGVLAHLSEELEKKDWDVLVAHFLGVDHVGHTFGPASQAMEDKLEQMDIAL 177
            V+DLHTVD+GVLAH+ +EL   DWDVL+AHFLGVDHVGHT+GP S  ME KL+QMD  L
Sbjct:  197 VKDLHTVDNGVLAHIFDELALPDWDVLIAHFLGVDHVGHTYGPNSPYMETKLDQMDAFL 255
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BLAST of mRNA_H-paniculata_contig20578.5336.1 vs. uniprot
Match: UPI0014556456 (GPI ethanolamine phosphate transferase 3-like n=1 Tax=Asterias rubens TaxID=7604 RepID=UPI0014556456)

HSP 1 Score: 89.0 bits (219), Expect = 3.160e-19
Identity = 40/60 (66.67%), Postives = 47/60 (78.33%), Query Frame = 1 
Query:    1 VRDLHTVDDGVLAHLSEELEKKDWDVLVAHFLGVDHVGHTFGPASQAMEDKLEQMDIALR 180
            V+DLHTVD+GVL HL  E+ +KDWDV++AHFLGVDH GH FGP   AM +KL QMD  LR
Sbjct:  191 VKDLHTVDNGVLEHLIPEMAEKDWDVIIAHFLGVDHCGHRFGPYHSAMGEKLSQMDQVLR 250
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BLAST of mRNA_H-paniculata_contig20578.5336.1 vs. uniprot
Match: A0A6G0XJI8_9STRA (GPI ethanolamine phosphate transferase 3 n=2 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XJI8_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 4.300e-19
Identity = 40/59 (67.80%), Postives = 44/59 (74.58%), Query Frame = 1 
Query:    1 VRDLHTVDDGVLAHLSEELEKKDWDVLVAHFLGVDHVGHTFGPASQAMEDKLEQMDIAL 177
            V+DLHTVD+GVL H   EL   DWDVL+AHFLGVDH+GHTFGP    ME KL QMD  L
Sbjct:  203 VKDLHTVDNGVLKHFFPELHANDWDVLIAHFLGVDHIGHTFGPNHPTMESKLHQMDAFL 261
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BLAST of mRNA_H-paniculata_contig20578.5336.1 vs. uniprot
Match: A0A3B3SLP1_9TELE (GPI ethanolamine phosphate transferase 3 n=2 Tax=Paramormyrops kingsleyae TaxID=1676925 RepID=A0A3B3SLP1_9TELE)

HSP 1 Score: 88.6 bits (218), Expect = 4.310e-19
Identity = 40/60 (66.67%), Postives = 45/60 (75.00%), Query Frame = 1 
Query:    1 VRDLHTVDDGVLAHLSEELEKKDWDVLVAHFLGVDHVGHTFGPASQAMEDKLEQMDIALR 180
            V+DLHTVDDG+L HL   L+  DWDVL+AHFLGVDH GH FGP   AM DKL QMD  +R
Sbjct:  190 VKDLHTVDDGILKHLYPTLQSSDWDVLIAHFLGVDHCGHRFGPNHPAMADKLTQMDGVIR 249
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BLAST of mRNA_H-paniculata_contig20578.5336.1 vs. uniprot
Match: S4RDL5_PETMA (GPI ethanolamine phosphate transferase 3 n=3 Tax=Petromyzon marinus TaxID=7757 RepID=S4RDL5_PETMA)

HSP 1 Score: 88.2 bits (217), Expect = 5.890e-19
Identity = 39/59 (66.10%), Postives = 45/59 (76.27%), Query Frame = 1 
Query:    1 VRDLHTVDDGVLAHLSEELEKKDWDVLVAHFLGVDHVGHTFGPASQAMEDKLEQMDIAL 177
            VRDLH+VDDG+L HL  E+ K DWDV++AHFLGVDHVGH  GP   AM DKL QM+  L
Sbjct:  208 VRDLHSVDDGILQHLHSEVAKSDWDVIIAHFLGVDHVGHRLGPLHPAMSDKLSQMNEVL 266
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BLAST of mRNA_H-paniculata_contig20578.5336.1 vs. uniprot
Match: A7RLT5_NEMVE (GPI ethanolamine phosphate transferase 3 n=2 Tax=Nematostella vectensis TaxID=45351 RepID=A7RLT5_NEMVE)

HSP 1 Score: 88.2 bits (217), Expect = 5.890e-19
Identity = 39/60 (65.00%), Postives = 46/60 (76.67%), Query Frame = 1 
Query:    1 VRDLHTVDDGVLAHLSEELEKKDWDVLVAHFLGVDHVGHTFGPASQAMEDKLEQMDIALR 180
            V+DLHTVD+GV+ HL  EL +KDWDVL+ HFLGVDH GH +GP   AM DKL QMD  +R
Sbjct:  209 VKDLHTVDNGVIKHLIPELRQKDWDVLIGHFLGVDHCGHRYGPYHAAMADKLRQMDKVIR 268
[Close]
BLAST of mRNA_H-paniculata_contig20578.5336.1 vs. uniprot
Match: UPI000A2A5F14 (GPI ethanolamine phosphate transferase 3 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A5F14)

HSP 1 Score: 88.2 bits (217), Expect = 5.890e-19
Identity = 38/60 (63.33%), Postives = 47/60 (78.33%), Query Frame = 1 
Query:    1 VRDLHTVDDGVLAHLSEELEKKDWDVLVAHFLGVDHVGHTFGPASQAMEDKLEQMDIALR 180
            V+DLHTVD GV+ HL  E+++ DWDV++ HFLGVDH GH +GP  +AMEDKL QMD  LR
Sbjct:  205 VKDLHTVDSGVIKHLVPEIKQNDWDVIIGHFLGVDHCGHKYGPYHRAMEDKLTQMDKVLR 264
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig20578.5336.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQQ0_ECTSI4.540e-2788.14GPI ethanolamine phosphate transferase 3 n=2 Tax=E... [more]
A0A836CFR5_9STRA7.320e-2277.97GPI ethanolamine phosphate transferase 3 n=1 Tax=T... [more]
A0A1W0A6G4_9STRA1.020e-2070.00GPI ethanolamine phosphate transferase 3 n=1 Tax=T... [more]
A0A067CQW9_SAPPC2.600e-2071.19GPI ethanolamine phosphate transferase 3 n=2 Tax=S... [more]
UPI00145564563.160e-1966.67GPI ethanolamine phosphate transferase 3-like n=1 ... [more]
A0A6G0XJI8_9STRA4.300e-1967.80GPI ethanolamine phosphate transferase 3 n=2 Tax=A... [more]
A0A3B3SLP1_9TELE4.310e-1966.67GPI ethanolamine phosphate transferase 3 n=2 Tax=P... [more]
S4RDL5_PETMA5.890e-1966.10GPI ethanolamine phosphate transferase 3 n=3 Tax=P... [more]
A7RLT5_NEMVE5.890e-1965.00GPI ethanolamine phosphate transferase 3 n=2 Tax=N... [more]
UPI000A2A5F145.890e-1963.33GPI ethanolamine phosphate transferase 3 n=1 Tax=E... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig20578contigH-paniculata_contig20578:283..462 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score112.1
Seed ortholog evalue9.2e-23
Seed eggNOG ortholog2880.D8LQQ0
Preferred namePIGO
KEGG rclassRC00017
KEGG koko:K05288
KEGG ReactionR05923,R08107
KEGG Pathwayko00563,ko01100,map00563,map01100
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0006464,GO:0006497,GO:0006505,GO:0006506,GO:0006629,GO:0006643,GO:0006644,GO:0006650,GO:0006661,GO:0006664,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009059,GO:0009247,GO:0009987,GO:0012505,GO:0016020,GO:0016021,GO:0016740,GO:0016772,GO:0016780,GO:0019538,GO:0019637,GO:0031224,GO:0031984,GO:0034645,GO:0036211,GO:0042157,GO:0042158,GO:0042175,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0045017,GO:0046467,GO:0046474,GO:0046486,GO:0046488,GO:0051377,GO:0071704,GO:0090407,GO:0098827,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576,GO:1903509
EggNOG free text desc.mannose-ethanolamine phosphotransferase activity
EggNOG OGsCOG1524@1,KOG2126@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001
Exons1
Model size180
Cds size180
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929536.2661152-CDS-H-paniculata_contig20578:282..4621622929536.2661152-CDS-H-paniculata_contig20578:282..462Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig20578 283..462 -
1691480903.2937849-CDS-H-paniculata_contig20578:282..4621691480903.2937849-CDS-H-paniculata_contig20578:282..462Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig20578 283..462 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig20578.5336.1prot_H-paniculata_contig20578.5336.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig20578 283..462 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig20578.5336.1

>prot_H-paniculata_contig20578.5336.1 ID=prot_H-paniculata_contig20578.5336.1|Name=mRNA_H-paniculata_contig20578.5336.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=60bp
VRDLHTVDDGVLAHLSEELEKKDWDVLVAHFLGVDHVGHTFGPASQAMED
KLEQMDIALR
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mRNA from alignment at H-paniculata_contig20578:283..462-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig20578.5336.1 ID=mRNA_H-paniculata_contig20578.5336.1|Name=mRNA_H-paniculata_contig20578.5336.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=180bp|location=Sequence derived from alignment at H-paniculata_contig20578:283..462- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTCAGGGACTTGCACACGGTCGATGACGGTGTCCTGGCTCACTTGTCCGA
GGAACTGGAGAAGAAAGATTGGGATGTGTTGGTGGCCCATTTTTTGGGGG
TCGATCACGTCGGGCACACGTTCGGGCCGGCGTCGCAGGCGATGGAGGAC
AAGCTCGAACAGATGGATATTGCCTTGAGG
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Coding sequence (CDS) from alignment at H-paniculata_contig20578:283..462-

>mRNA_H-paniculata_contig20578.5336.1 ID=mRNA_H-paniculata_contig20578.5336.1|Name=mRNA_H-paniculata_contig20578.5336.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=360bp|location=Sequence derived from alignment at H-paniculata_contig20578:283..462- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTCAGGGACTTGCACACGGTCGATGACGGTGTCCTGGCTCACTTGTCCGA
GGAACTGGAGAAGAAAGATTGGGATGTGTTGGTGGCCCATTTTTTGGGGG
TCGATCACGTCGGGCACACGTTCGGGCCGGCGTCGCAGGCGATGGAGGAC
AAGCTCGAACAGATGGATATTGCCTTGAGGGTCAGGGACTTGCACACGGT
CGATGACGGTGTCCTGGCTCACTTGTCCGAGGAACTGGAGAAGAAAGATT
GGGATGTGTTGGTGGCCCATTTTTTGGGGGTCGATCACGTCGGGCACACG
TTCGGGCCGGCGTCGCAGGCGATGGAGGACAAGCTCGAACAGATGGATAT
TGCCTTGAGG
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